Cynoglossus semilaevis (tongue sole): 103388160
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Entry
103388160 CDS
T04866
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103388160 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csem03400
]
103388160 (rad54b)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103388160 (rad54b)
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
103388160
NCBI-ProteinID:
XP_016893135
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Position
13:complement(3927569..3945783)
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AA seq
916 aa
AA seq
DB search
MRRSAAPSQLLGNAVKKPRFLPPGASSPSFACEPKHLSPKPGLGNALEKVQRTLVAPVAS
KTGCNVQPRAPQSAPALSRALARVLSATESKENDANLEHSESVTRDNTEEHGKKGVSSSS
QLAPRSLQTPMPSAESSSQDGVRYFSVMWCKASKKKHKRWEGDAVLVTRGRTVTLKDMEG
KDIGKGSGYKVSELASLSEGQTLMVGGKEVEVMGVVSAEDYARGRCFRELQIEEEEPQTK
SALAAPRRFTSKPFCPPMQSGRGEHPRGKTEEEHIPRPRHDPSASGALVMPRPSANHQWS
NNKSGLPVVDVVVDPHLTSHLRPHQRDGLLFLYECVMGMRAVGQHGAILADEMGLGKTLQ
SVALAWTLLKQGPYGGKPITKRVLVVTPGSLVQNWGAEFNKWLGRERISVFTVDQDHRIE
QFVLSPLHSVLVISYEMLLRCLEQVQKMDFGLIICDEGHRLKNSSIKTSSALSSLSCNRR
VILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPGCTEEERILGEER
AAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSALQLELYRRLLCHQVFRACLQSS
TQSHTHLACITALKKLCNHPALLHSTVKEKTEMESGESSIYDRLVDVFPESYSSGSLITN
DCGKLLVLSDLLTAIRQLSPSDRVVIVSNYTKTLNLLQDLCVLAGYTFCRLDGQTPTNQR
QRLVDGFNSPYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQ
KKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTNELRDLFSLTDTP
SLTLTEENQQVDDRPCQLGRHSDRGGVTAPKHLSMSELMKWRHFSGDTDTFSDPYLDHAR
NYITFAFQTTISHTVW
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcagctgctcccagtcagctcttgggaaatgcagtgaaaaagcctagattt
ttacctcctggagcatcttctccaagctttgcatgtgaaccgaagcacctttcccctaaa
cctgggttaggcaatgcattggaaaaggttcagaggactctagtagcacctgttgcaagt
aagacaggctgcaacgtccagccaagagcaccacagtctgctccagccttgtcacgggct
ctggctcgtgttctaagtgcaacagaaagcaaggaaaatgatgcaaacctggaacattct
gaaagtgtcaccagagacaacacagaagagcatggaaaaaaaggagtgagcagttcttcc
cagttggctcccaggtctcttcaaactccaatgccttctgcagagtcatcaagccaggat
ggtgtgcgttacttcagtgtgatgtggtgtaaagccagtaagaaaaaacacaagcgttgg
gagggagatgccgtcctggtgacaaggggacgcacagtcacactaaaagacatggaagga
aaagacatcgggaaaggcagcggctataaggtgtctgagttggcatctctttctgagggg
cagaccctgatggttggtggaaaggaggtggaggtgatgggggtcgtttctgcagaagac
tatgcgagaggacgttgttttcgagaattgcaaatcgaggaagaggaaccacaaacaaag
tcggccctggctgctcctcgtcgttttacctccaaaccattctgcccaccgatgcagtca
gggagaggtgaacatccacggggtaaaacagaggaagaacacattccaagacctcgtcat
gatcccagtgcttcaggtgctctagtgatgcctcgaccctccgccaaccaccagtggtct
aataacaagtcaggacttcctgtagtcgacgttgttgttgatccacatctgacctctcat
ctgagacctcaccagagagacggcctgcttttcctctatgaatgtgtcatgggcatgaga
gctgtgggtcaacatggtgccatcctggctgatgagatgggacttggtaagaccctccag
agtgtggcgctggcctggactttgctgaagcagggcccgtatggagggaaacccatcaca
aaacgtgtccttgtggtgacgcctggaagcctagtgcagaactggggtgcggagtttaac
aagtggcttggacgtgagaggatcagcgttttcactgtggatcaggaccaccggatagag
cagtttgtgttatctcctctacacagtgttctggttatcagctatgagatgctgctgcgc
tgcttggagcaggtccaaaagatggattttggtctcatcatttgcgacgaaggtcacagg
ttaaagaacagcagcatcaaaacatcttctgctctcagcagcctcagctgtaaccgcagg
gtcatattaacaggaactcctgtacagaatgatctgcaggagttctatgccattatagag
tttgtgaatccagggattcttggatcatcaactgcttacagaaaagtgtatgaagaacca
attttacgctccagacaacctggctgcacagaggaggagaggattttgggagaggagcga
gcagccgagctgtcacgactgactggcatgttcatcctgaggaggacgcaagagatcatc
aatcgctacctgcctcctcgtctggactggacactgttctgtgagccctcagctctgcag
ctggagctttacaggcgcctgctgtgtcaccaggtcttcagagcctgtcttcagagctcc
acacaatcacacacacacctggcctgcatcactgcgctgaagaagctgtgtaaccaccct
gctctgctgcactccaccgtcaaggagaaaacagaaatggaatcaggggagagttccatc
tacgacagattagtcgacgtcttcccagaatcctactcttcaggatctctgatcactaat
gattgtgggaaacttctggttctgtccgacctgctgactgccatacgacagctcagcccc
tcagacagggtggtcatcgtgtccaactacaccaagacactgaacttgctccaggacttg
tgcgtactcgcgggctacaccttctgtcgcctggacggacaaacaccaaccaaccaacgg
cagcgactggttgacggtttcaacagcccttattctcagaactttgtttttctgctcagc
tccaaagctgggggggtggggcttaatctgatcggtgcctcccatctggtgctttacgat
atcgactggaaccctgccaatgatattcaggccatggcgagagtatggagagatggtcag
aagaagactgttcacatctaccgtctcctgactgcaggtaccatcgaggagcgtattttc
cagagacaggtgtccaaacagggactttctggaactgtggtcgacctgggcaaaggggcg
gagcacaccagcttctccaccaatgaactgcgagacctcttcagcttgacagatactccc
tccctgaccctcacagaggagaaccaacaggtcgatgaccggccgtgtcaactcggtcgt
cacagcgaccgtgggggtgtgacggcaccgaagcatctgagcatgtctgaactaatgaag
tggagacatttctccggcgacacagacaccttctcagacccctacctcgaccacgcacgc
aattacatcaccttcgctttccagaccaccatttcccacacagtctggtaa
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