Cynoglossus semilaevis (tongue sole): 103388289
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Entry
103388289 CDS
T04866
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csem03016
]
103388289 (cdkal1)
Enzymes [BR:
csem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
103388289 (cdkal1)
Transfer RNA biogenesis [BR:
csem03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
103388289 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
103388289
NCBI-ProteinID:
XP_008321432
UniProt:
A0A3P8UUT3
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Position
13:complement(5480696..5662747)
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AA seq
564 aa
AA seq
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MPSAGDSLIEDIEDMVSSSDPTPHERQAARKSIIPRSRRRKEQLNNEELQTDSLIPGTQK
IWMKTWGCSHNSSDGEYMAGQLAASGYKMTDDPTEADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GKRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCINDFKRVVDFLKERVPGITIATDIICG
FPGETEEDFQETLDLVKCYRFPSLFINQFYPRPGTPAAKMEQVAAHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVAHNKFYEQVLVPKRPEFKGKMIEVDIYEAGKH
FMRGRPVDDGKLFTPSIAAPLQKGEVSGLVQSHIANGIHGPPPVSAPSLWSFGSYSLDRE
TVKMLGIGLTLAVAILAFVVEKLC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgctggtgactcactgattgaagacattgaggacatggtgtcctcgagtgac
cccactcctcatgagagacaggcagcgagaaaaagcatcataccaaggtccagaaggaga
aaagagcagctgaacaacgaggagctgcagacggacagcttgattccggggactcagaag
atttggatgaaaacatggggctgcagtcacaacagctcagatggagagtacatggctgga
cagttggctgcaagtggatacaaaatgactgacgacccgacagaagccgacctgtgggta
ctcaacagctgcacagtgaaaaaccctgcagaggaccacttcaggaactccatcaaaaaa
gcccaggagcagcagaagaaggtggtggttgctggttgtgttccccaggctcagccacgt
atggattacctgaaaggactcagcatcatcggggtccagcagattgatcgagtggtggaa
gtggtggatgaggcagttaaaggtcactctgttcgcctgttggggcagaagaaagatgga
ggcaagaggctgggaggagctcgactggacctgcccaaaatcaggagaaaccctctcatt
gaaatcatctccattaacacggggtgtctaaacgcttgtacctactgtaagaccaaacac
gccagaggagacctggccagttatcccatcgaggagctcgtggagcgagccaggcagtct
tttcaagagggtgtgtgtgagatctggttgaccagtgaggacaccggagcgtatggacga
gacattgggacagacctgcccacactgctgtggaaactggtggaagagattccggaagga
gccatgctgaggctgggcatgaccaaccctccgtacatcctggagcacctggaggaaatg
gcgaagatattgaatcatcctcgggtctacgccttccttcatgttcctgtgcagtcggcc
tctgacagcgtactgatggacatgaagagagagtattgcatcaatgacttcaagagagtg
gtggactttctcaaagagagggttccaggtatcaccattgctacagacataatctgtggt
tttcctggtgaaacggaggaagactttcaggagacattagacctggtgaagtgttatcga
tttcccagtctcttcatcaaccagttctaccctcgacccggtacaccagccgccaagatg
gagcaagtagctgcacatgtgaaaaagcagaggacgaaagaactgtcacaacttttccac
tcgtacaacccctacgaccacaaggtcggggagaggcagcatgtgctggtgacagaggag
tcgtttgatgctcagtattacgtggctcacaacaagttctatgaacaggtgctggttcca
aagagaccggagttcaaaggtaaaatgattgaggtggacatatacgaagctgggaaacac
ttcatgagaggacgtccagtggacgacggcaagctcttcacgccctccatcgctgctccg
cttcagaaaggagaggtgtccggcctggtgcagtcccacattgccaatggaatccacggc
cctccgcctgtttctgctccatccctttggtcatttggttcctacagtctggacagggaa
acagtgaagatgctgggaattggactcactctggccgtggccattctggcctttgtggtg
gagaaactgtgctga
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