Cynoglossus semilaevis (tongue sole): 103388481
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Entry
103388481 CDS
T04866
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csem00535
]
103388481 (col14a1)
Proteoglycans [BR:
csem00535
]
Extracellular matrix (ECM) proteoglycans
Others
103388481 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Interfer-bind
NDNF
VWA_3
Motif
Other DBs
NCBI-GeneID:
103388481
NCBI-ProteinID:
XP_008321702
UniProt:
A0A3P8UXX3
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All DBs
Position
13:complement(9439989..9560417)
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AA seq
1782 aa
AA seq
DB search
MPSPRWTRWLVWSPLVFLVLVAAQDEVPAPRRLRFKVLSPDKLLVTWKEPKGDFDSYLFL
YNSIPGGHQKELIVSKSDTKVLITDYSPAKAYTVGVIAVRGGVQSKPLQGRHKAEIGESD
EGGKTEPQTRTDSLGPPDEANEISGADQFVCRTEAIADIFILVDGSWSIGRLNFRLIRNF
LENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNTFSTKEAVLDAVKNLPYKGGNTLTGLA
LNYIMENCFKPEAGARVGVPKIGILITDGKSQDDVIPPSEMLRNAGIELFAIGVKNADEN
ELLSIASEPENTHVYNVADFNIMSSIVEGLTRTVCEQVELQDKDIKEKQIPLEIGPPSDL
VTSEVTARSFRISWSHAPGDVEKYRVVYYPAQGGEPQEAVVDGTETSVVLQHLSSSTEYQ
LSVFAVYVNEASEALRGSEMTSALPSATGLRLFDITHSSMKARWDAMDGVSGYMLLYAPL
TEDGDPDETEIKVSDSVTELELDGLNPHTEYTVTVYAMFGEEASDPITNQDTTLPLSPPT
NLQFSDITHNSAHISWDPAPKGVTGYRIMWVKAGELLNEEVDVGAVTSYDLSDLTSLNEY
SVAIFAMYENGRSEPLADGFTTTPVPGPVNLRSSDVSTDSFKVSWDQSTDDIVLYRLSWA
PFAGGDTKEVILSGSDNRYVLSNLSPSTDYEVMLTAVFQDESESDTVSVVETTLAQTTTI
AATTAVVHQGIRNLQLIDETTQSIEASWEMEDPYVQSYRVSYTSPRDHEEESVVVPGGQR
RAVLENLLPDTEYKVTVTPVYMDRQDGVSVSALGSTLPLLSPGNLRVSEEWYSRFRVTWD
PSPTPALGYRIVYQPIYVSGQVLETTVGEDVNSILLLNLLSGTEYSVQVTASYPAGQSEP
QLVNAKTLTLGVSGLSTYQVQPNSMCVQWQPLLHATLYRVSIQSTLNGQRQEVSIGGGAS
RQCFYDLTPSSQYQISVHTQLQEMEGPPVSITDMTLPAPTQAPTEAPTTEPPPTIPPAKE
VCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIVQFSDDARTE
FQLSSHSNKEVMLEAIQRIRYKGGNTKTGRAIKHVKESIFTPEAGARRGVPKVLVVLTDG
RSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQ
LITFVCEAATATCPSVLMSGNTLAGFRMMEKFGLIEKEYSTIPGVSLEPGSFNSFPCYRL
HRDALVSQPTKYLHPEGLPSDYTISMMIRLLPETPQEPFALWEILNDDHEPLVGLILDNS
GKTLTFFNHDYKGDFQTVTFEDTKVKKIFHGSFHKLHVIISKTSVKVVLDCSVIGEKSIN
AAGNITTDGVEVLGRMVRSRGLQDSSAPFQLQMFDIICSTSWANRDKCCELPALRVEEQC
PAMPHACTCSQDSKGPPGPTGPPGGPGIRGARGDRGEPGVTGPQGPVGENGPAGPPGPPG
PQGPSGLTIQGPPGAAGAKGDRGDIGPAGLMGVAGSPGSIGRDGPPGPRGLPGNIGPQGR
QGPTGPVGAPGAPGSPGPGGPPGHQGDQGLPGSAGTKGDKGERGDLQSQAAVRAIARQVC
EQLIQSHLSRYNSVLNQIPQSSVSVRTVPGPPGEPGRRGPAGPQGESGPPGRPGFPGTNG
QSGRPGERGLPGEKGDRGSPGVGSQGPRGPPGPPGLPGEGRTGSQGSPGRPGNPGAAGRP
GNPGVSGPAGPPGYCDQNSCLGYNVGGKFVQLLFVQHLIHVH
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaccaaggtggaccaggtggctggtttggtctccactggtattcttggtccta
gttgcagcacaggatgaggttccagcgccgaggaggcttcgtttcaaagtgctgagtccc
gacaaactcctggtgacgtggaaggagcccaaaggagactttgacagttatctgttcctc
tacaacagcatcccaggtggacatcagaaggagctcatcgtctctaaatcggacaccaag
gtgttaataacagactacagcccggccaaagcctacacggtcggtgtcatcgctgtcaga
ggcggcgtgcagagcaaaccgctgcagggcagacataaagctgaaataggtgagagtgat
gaaggaggcaagactgaacctcagacacggactgattcacttggacctccagatgaagcc
aatgagatctcaggagccgatcagtttgtctgccgcacagaagccattgccgacatcttc
atcctggtggacggatcctggagcatcggtcggcttaactttcgtctgatccgcaatttc
cttgaaaacctggttaatgccttcgatgttggcattgataagacaagaataggacttgct
cagtacagtggcgatccgagaatagagtggcacctaaataccttctccactaaagaagcc
gtccttgatgctgtcaaaaaccttccctacaaaggaggaaacactctgacaggcctggca
ttaaactacatcatggagaactgcttcaagcctgaggcgggggcacgagtaggtgtaccc
aaaattgggattttaattacagacggaaaatcccaggatgatgttatccccccttcggag
atgctgcgcaacgctggcattgagctgtttgccattggtgtgaagaatgccgacgagaac
gagttgctgtccatcgcctcagagccggaaaacactcatgtttacaatgtggccgacttc
aacatcatgagctccatagtggagggtctgaccagaactgtgtgtgaacaagtggagctg
caggataaagacatcaaagagaaacaaataccgttggaaataggaccaccgagtgacctt
gtgacctcagaggtcacagcgcggagcttcagaatctcttggagccacgccccaggagat
gtagagaaatacagagtggtttattatcctgctcaggggggagaaccacaggaggctgta
gtggacggcactgaaacctcggtggtgctgcagcatctcagctcctctactgagtatcag
ctgtctgtctttgctgtgtacgtgaacgaagcgagtgaagctctccgaggatcagagatg
acctcggctctacccagtgcgacaggcctgcggctgtttgatataactcacagctctatg
aaagcacgttgggacgccatggacggggtctctggctacatgctgctgtatgcaccgctc
acagaggacggggacccggatgaaacagagatcaaggtgtcagactctgtgaccgagctg
gagctggacgggttgaaccctcacaccgaatacacagtcacggtttacgccatgtttgga
gaggaggccagcgaccccatcacaaaccaggacaccacactaccactgagtcctcccact
aacctgcagttctctgacatcacccataactccgcccacatcagctgggatcctgccccc
aaaggtgtcacaggttaccgcattatgtgggtgaaggcgggggagcttctgaatgaggag
gtggacgtcggagcagttacctcttatgacctcagcgacctcacatctctgaatgagtac
tcggtggccatctttgccatgtatgaaaacggccggtcagagccgctcgccgatggattc
actaccactccagttcctggtcctgtgaatctacgctccagtgatgtcagcacagacagc
ttcaaggtcagctgggatcagtccaccgacgacatcgtgctctacagactctcctgggct
ccgtttgcagggggcgacaccaaagaggtgatcctcagtggaagtgataacagatacgtc
ctgtccaacttaagtccatctactgactatgaagtgatgttgacggcggtcttccaggac
gaatcagagagcgacaccgtctctgtggtagagaccacattggctcagacgacaacgatt
gctgccacaacagcagttgtgcaccagggtataagaaacctccagctgatcgacgagacc
acacagagtattgaggcatcatgggaaatggaagacccctatgttcagagctatagggtc
tcctacaccagccctcgggaccatgaagaagagtctgtggtggttcctggtggccagagg
agagcggtgctggagaatttactaccagacacagagtacaaagtgacagtcacaccagtg
tatatggacagacaggacggcgtcagtgtctctgccctgggttcaacattgccgctcttg
tcccctggaaacctccgtgtgtctgaggagtggtacagccgcttcagagtcacctgggat
ccaagtccaactccggcgttgggctacaggattgtctaccagcccatttatgtttcagga
caggttttggagacaacggtgggcgaggatgtgaactccattcttctgttgaatttgctg
agtggaacagaatacagcgttcaagtgactgcttcttaccccgcaggacaaagtgaacca
cagctagtcaacgccaaaacattgaccctcggtgtctccggcttgtccacctaccaggtc
cagcccaacagcatgtgtgtccaatggcagcctcttttacacgccacattatacagagtc
tccatacagtcaacactcaacggtcaacgacaggaagtgagtattggaggcggagcttcc
cgacagtgtttctatgacctcactcccagcagccaataccagatcagtgtccacacgcaa
ctgcaagaaatggaaggaccaccagtctccatcactgacatgacattgccagcgcccact
caggctcctactgaagctcccactacagagccgcctcccacaatcccacctgctaaagaa
gtgtgcaaggaggccaaggctgacctggcctttctggtcgacggctcctggtctattgga
gatgacaacttcatgaagataacacgtttcctctacagcaccatgggttctctggatctg
attggaccagacggcactcaggtggccattgttcagtttagtgatgatgcccggacagag
ttccagctgagttcccatagcaacaaagaagtgatgctagaggcaattcagcgaatcaga
tacaaaggaggaaacaccaaaacaggtcgtgccatcaaacatgttaaagaatccatcttt
actccggaggccggggcccgaagaggtgttcccaaagtcctggttgtccttacagatgga
cgctcacaagacgatgtcaacaaggtgtccaaggaaatgcaaatggagggctacatcatc
tttgccattggctttgctgacgccgactatggagagctggtgaatattgccagcaaaccc
agcgacagacacgtcttctttgtggacgatttggatgctgtgaagaaaatagaggaacag
ctcattaccttcgtctgcgaggcggccactgccacttgtccttctgtgttgatgagcggt
aacaccttggcaggtttccgtatgatggagaagtttggcctaatagagaaagagtacagc
accatccctggagtttctctggagcctggctccttcaacagcttcccttgttacaggtta
caccgagatgctctggtctcacagcccaccaagtacctgcatcctgaaggtttaccatct
gattataccatttcaatgatgattcgtcttctaccagagaccccccaagagccctttgca
ttatgggaaattctcaacgatgaccacgagcctttagttggacttatcctcgacaactcg
ggaaagacgttgacgttcttcaaccacgactataaaggagacttccagactgttaccttt
gaggacacaaaagtcaaaaagattttccacgggagcttccacaagctccatgtgatcatc
agtaagacgtctgtaaaggtggtgttagattgttctgtgattggagagaaatccatcaac
gcagcggggaacatcaccactgacggcgtggaggtcctgggaagaatggttcgatccaga
ggactacaggacagctctgctccattccagctccagatgtttgacatcatctgcagcaca
tcctgggccaacagagataagtgttgtgaacttccagcactgagagttgaagagcagtgt
ccagccatgcctcacgcctgcacgtgctcccaggacagcaaaggacccccaggacccacc
ggaccccctggtggtccaggcataagaggggccagaggagacagaggagagccaggagta
acaggacctcaagggccagtgggagagaatggtccagctggacccccagggccacctggt
ccccaaggaccaagtggactcaccattcaaggccctcctggagctgctggagcgaaggga
gacagaggagacatcggccctgctggactaatgggtgttgctggaagtcctggttccatt
ggtagagatggccccccaggaccgaggggtcttccaggaaacattggaccacaggggcga
caaggacctacaggacctgtcggagctccaggtgcaccaggttctccaggaccaggtgga
cctccagggcaccaaggagatcaaggacttcctggttctgctggtaccaaaggcgataag
ggagaaagaggtgacttgcagtcccaagctgctgtccgtgccatcgcacggcaagtgtgt
gaacagctcatccagagtcatttgtctcgatataactcagtactaaaccagatccctcag
tcatcagtatcagttagaacagtacctggaccaccaggggagccaggcaggagaggtcct
gcaggaccacagggagagtcaggcccacctggaagaccgggttttccaggtaccaacggg
cagagtggacgaccaggagagagaggtctgcctggagagaagggagacagaggaagtcca
ggggttgggtctcaaggacctcgaggaccgcctggaccaccgggtctgcccggcgaagga
agaacaggcagccagggttcgcctggtcgacctggtaaccctggggctgcaggcagaccg
ggaaatccgggtgtctctggaccagctggaccaccgggatactgtgaccagaactcttgt
ctgggatacaacgtgggaggtaagtttgtgcagctgctatttgtacaacatttaatccac
gtgcattag
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