Cynoglossus semilaevis (tongue sole): 103389135
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Entry
103389135 CDS
T04866
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103389135 (rc3h2)
04121 Ubiquitin system [BR:
csem04121
]
103389135 (rc3h2)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103389135 (rc3h2)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103389135 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-CCCH_4
zf-RING_UBOX
zf-C3HC4_3
zf_CCCH_4
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103389135
NCBI-ProteinID:
XP_008322645
LinkDB
All DBs
Position
14:complement(2650537..2680023)
Genome browser
AA seq
963 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSSHQPISLGCSHTVCNTCLLKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPNVQPVSLSGAGEVEHYEVCRVCVEELALYLKPISGAKGVAA
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALGREHHAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDSPQPQANSKYKTSMCRDLR
QQGGCPRGNNCTFAHTQDELEKFRLRNKKSSSVGRTFPLASGVMGKTFTTEGSVHTDVCA
GAGQGLKGTEEGTVTLTEGAPGLTHPQLISRGADIMEEMNRALPNGSNGSNGLPAPHRLS
LVSTEKKSISPPRTTVSSLSASSPLTTVGHSDGAAPLPKHGQFMLRPPHPTPASELYYQE
SHSAYDPAHYQPNSGSYYPSTLHPSHKPCMARFLRSANVPESSLPPSVGPQSTSYPSDPQ
TSHPPSSSPSAYSPHPPRERMGPAFHPHPGQPQFGHLTPGHGVYAPLYDSRRVWRPQLYH
REDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYSRVPLGYEDLFR
RKQEQWAHHHHHHSTSRPSQSSHIFTMDFGSERLESSGGQCAGCRYRGEESLAHYSPWSC
GSIGPCLSPFEPETLTHTPPHSCSEPSDLDNSGSRGGVGGGGGSGSTGTNSVGKRWLHSL
DHYRRMKEEDPIIPFSEGPMISKWGAISRASRTGYHTTDPVQATACQRSTSTTPINFKGK
EGS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaggccgcccagtggacagagttcctgtcctgtcccatctgctacaatgag
tttgacagcagcagccaccagcccatcagtctgggctgctcccacacggtgtgtaacacc
tgcctcctcaaactgcaccgcaaggcctgccccttcgaccagacgcccatcagcaccgac
atcgacctgctgccagtcaactgcgccctgctgcagctggttggagctcaggtcccaaat
gtgcagccagtgagcctgagtggtgcaggagaggtggagcactatgaggtctgcagggtg
tgtgtcgaagagctggctctctaccttaaacccatcagtggagcaaaaggtgtagcggcc
ctcagtcccagcgtcctcagtcgacccatgcagaggaagctggtgaccctggtgaactgt
cagctggtggaggaggagggccgtgtgcgggcggtgagagcgggcagatctctgggggag
agaaccgtcaccgagctcatcctgcagcatcagaacccacagcagctgtctgccaacctg
tgggctgcagtcagggcacgaggatgtcagttcctgggaccggctatgcaagaagacgca
ctgaagctagtgctgctggctctggaggacggctcggctctgtcccgaaaagtcctggtt
ttgtttgtggtccagaagctcgaggcccggttcccacaggcctccaaaaccagcataggt
cacgtggtgcagctgctctacagggcctcctgcttcaaggtgaccaaacgtgatgaagac
tcctccctgatgcagctgaaggaagagttccgcacctacgaggctctcgggagggaacac
cacgctcagatcgtccacatcgccatggaggcaggtctgaggatctcacctgagcagtgg
tcctctctgctgtatggagacctggtccataaatcccatatgcagtccatcattgacaag
ttgcagtctccggagtcttttgccaagagcgttcaggagctgaccatcgttctgcagagg
acaggcgacccggccaacctcaccagcctcagaccacacctggagctgctcgccaacatt
gaccacaatccagatgctccagctccgtcatgggaggagctggaaagtgtgatgctagct
gtcaaactggtggtgcatggactcgtggagttcatacagaacttcagcaagaagagccac
gacagtccacagcctcaggctaacagtaagtataagaccagtatgtgcagagacctccgt
caacagggaggctgcccccgaggaaacaactgtacgttcgctcacacacaggacgagctg
gagaaattcagattgagaaacaagaaaagcagcagcgtgggtcgtaccttcccgttagcg
tcgggggttatgggcaagacgttcaccacggagggcagcgttcacacagatgtgtgtgca
ggagcgggccaggggctcaaaggcacggaggagggtacggtgactctgacagaaggagct
cctggcctgactcaccctcagctgatctccagaggagctgatataatggaggaaatgaac
agagctttgcccaacggatccaacgggtcaaacgggcttcctgccccccacaggctctcg
ttggtatcaacagaaaagaagtccatctctcctcccaggaccactgtcagcagcctctca
gcctcttctcctttgaccacagttggacacagtgatggagctgctcctctacctaaacat
gggcagttcatgctgcgtcctccacatccaacaccggcgtcagagctgtactatcaggag
tctcactctgcttatgacccggcacattaccagccaaactcaggttcctactatccatcc
actctccatccttctcacaaaccctgcatggctcgcttcctcagatccgccaacgtccca
gaatcctctttgccaccttctgttggccctcagtcaacttcctaccccagtgaccctcaa
acatcacacccaccttcctcttctccctctgcgtactctcctcacccacccagagagcgg
atgggtccggcctttcatcctcacccaggacagcctcagtttggccacctgaccccgggg
catggagtctatgccccactgtatgacagcaggagagtctggaggcctcagctgtaccac
agagaggatgccaggagtaactcactgcctccagaagtgctgcattcgtccgtctaccag
cctcctctcagggagaggttcaactccctggacagtaactactgctctggagcagagcat
cgtgcagggctgcacagggactacagtcgtgttcccctgggctacgaggatctgttcagg
aggaagcaggaacagtgggcgcaccatcaccaccatcacagcacctccagaccctcccag
tcctcccacatcttcaccatggattttggatctgagcgtttggagagcagtggaggtcag
tgtgctggctgcaggtacagaggagaggaaagtttagcacattattctccatggtcctgt
ggttccattggcccgtgccttagtccttttgagcctgagacactgacgcacacgcctcct
cactcctgctcagagccctcggatttagacaacagcggtagccgaggtggtgttggtggt
ggaggcggcagtgggagtactggtaccaatagtgtgggaaagcggtggctgcattctctg
gaccactaccgtcgaatgaaagaagaagatccaatcattcccttcagtgaggggcccatg
atctctaagtggggggccatatccagggcctcgcgcacaggctatcacacgaccgatcct
gtccaggccaccgcctgccagagaagtaccagcaccacacccatcaactttaaaggcaag
gagggatcatag
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