KEGG   Cynoglossus semilaevis (tongue sole): 103389205
Entry
103389205         CDS       T04866                                 
Symbol
wdr7
Name
(RefSeq) WD repeat-containing protein 7
  KO
K24738  rabconnectin-3b
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:csem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103389205 (wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103389205 (wdr7)
Membrane trafficking [BR:csem04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    103389205 (wdr7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I Beta-prop_EML ASA1 CFAP251_N ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st KNTC1_N PAC11 WDR90_beta-prop_4th WDR72_alpha-sol Tricorn_2nd PD40
Other DBs
NCBI-GeneID: 103389205
NCBI-ProteinID: XP_016893812
LinkDB
Position
14:3824688..3853453
AA seq 1448 aa
MSGNGLVLPIVLWGRTAPTHCISTVLVMDDFSTIITGCHDGQICLWDMTPELEICPRAML
FGHTASITCLSKASACSDKQFIVSAAESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
VSTEREGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSKMQDMDPVFEEESKPIYCQGCQSISFCTFTQSSLLVVCSKYWRV
FDAGDYSLLCSMPSDGDQIWAGGEFIAADKVIIWTEDGHSYIYKLPASCLHASEHFRSDV
GKTSDGSVPPLLCSIANRADKELLICPPVTRFFFGRREPFHKLLIQGDSAGRLSLWSIPE
TSSKLPPTTPAELQVSSTVNLQEAFDKLTPVSAGIIDQLSVLPGKEEPIKVTSSVYIPSQ
GRLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRSKVTCVLYPYQISP
RYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIIPPENCSTRVQHCVCSVAS
DHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCV
MGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAA
DNADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAVIIQLLTEEAQRPNPTLVSPE
SLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLL
EYNLTMDTAKLFMSCLHAWGLNEQLDGICLDRLGMLRPHCPISFGLISRGGHMSLMLPTF
KESLLQQLSLATGRKLTLSDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEH
MKKAPARPPRPGGTPESPRRTPAVPPQPSCPALQAQIKQAAVAAAANISSATAAGVPGAP
GGLAQGASGSLSPGSASYNIPTVNEGWSQLAAMHCVMLPDLLGLDKYRPPLLEMLARRWQ
DRCLEVREAAQALLLAELRRIGQCGRKETIDMWAPYLPQYVDTVSSRKCLTATAIVLLGV
IGAEFGAEIEPPKGSGRARTGGQAPEGFGLTSGGSSNYSLARHTCKALTFLLLQPPSPKL
PAHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLNPPADS
ARSARHALSLIATARPPAFITTIAREVHRYNAAQANSQSQQNVHTTTLARAKTEILRVID
ILIEKMPGDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICRFYMVGYCDRSHRIAVG
ARQGSVALYDVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQMNTSLLGS
IGMLNSAPQLRCMKTYQVPLVQPASPGSQNHLKLARLIWTSNRNVILMAHDGKEHRFMLV
TNTLQTML
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgtcgggaaacggcctagttttacccatagtgctgtggggccgcacagctcccacacac
tgcatcagcactgtactggtgatggacgacttcagcaccatcatcacaggctgccatgac
ggacagatctgcctgtgggacatgacgccagagctggagatttgtcccagggccatgttg
tttggacacacagcctccattacctgtctatccaaagccagtgcctgcagtgataaacag
ttcattgtcagtgcagcagagagcggggagatgtgtttatgggatgttaatgatggacgc
tgtattgagtttacaaaactggcctgtgctcacaccggaatacagttttaccagttcacc
gttagtactgagagagaaggacgtctcctctgtaacggtcactacccagaaatcctggtg
gtggatgcgaccagcctggaggtcctgtactcactggtatctaagatctcaccggactgg
atcagttccatgagcatcatcaggtcccatcgtacacaggaggacacagtggtggccgtg
tcagtaacagggattctaaaggtctggatcatcacagctgaggtcagcaagatgcaggac
atggacccagtgtttgaagaagagtccaaacccatctactgtcagggctgtcagagcatt
tccttctgcaccttcactcagagcagtctgctggttgtctgctccaagtactggagggtt
tttgacgcgggtgactactcgctgctctgctcgatgcctagtgacggtgaccagatttgg
gctggaggagagttcatcgctgcggacaaagtcatcatctggactgaggacggacacagc
tacatctacaaactgcctgccagttgtctacatgccagcgaacacttccgcagtgatgtc
ggtaaaaccagcgatggctcggtcccgcctctcctctgcagcatcgccaaccgtgcagac
aaagagctgcttatctgtcctcctgtgactcgcttcttctttggccgacgggagccgttc
cataagctcctgatccagggagactcagcaggtcgactctctctgtggagcatccccgaa
acatcttcaaaactgccgcccaccaccccagctgagctgcaggtctcctccacggtcaat
ctccaggaggcgtttgacaaactgaccccggtgtctgcggggatcatcgaccagctcagt
gtcctgcctggcaaagaagaaccgatcaaggtcacatccagcgtctacatcccctctcag
ggccgacttgtgtgcgggagagaagacggcagcatcatcctggttcctgccactcagaca
gccatcgttcagctgctgcagggagaacacatgctgcgcagaggttggcctcctcatcgc
acattgcgtggtcatcggagcaaggtgacatgtgtcctgtatccgtaccagatctccccc
cggtatgaccagcgctccctggtgtctggaggagtagacttctctgttattgtctgggac
attttcactggagagatgaagcacatcttctgtgtccatggaggggagatcactcagctc
atcatcccacctgaaaactgcagcactcgtgtccagcactgcgtctgctccgtggccagt
gatcactctgtcggtctgctgagtctcagggagagaaagtgcatcatgctggcgtccaga
cacctcttccccatccaggtcatcaagtggcgtccggcagacgactacctggttgtggga
tgttctgacggctccgtctacgtctggcagatggacacaggtgctctggaccgctgtgtg
atgggcataacagccgtggagatcctgaacgcctgtgatgagctggccccggccactgtg
gacgctctgagccactccgctgtgaacctgaagcaggccatgacccgtcgcagcttggcg
gcgctaaagaacatggctcagcacaaactgcaaacgctcgcgaccaacctgctcgctgca
gacaacgctgacaagggtaacctgcccaaatactcccataatgcactggtggtccaggcc
atgaagaccaacctgacagacccggacatgcacgtactgttcttcgatgttgaggccgtg
atcatccagcttctaactgaagaagcccagagaccaaacccaacactggtgtctccagag
tcactacagaagagtcaggctggtgccgacaaaggaggctccttcctggccaacaaaatc
ttcaaacaggtgaaggaaaccatgaaggagaccatcaaggaacacctgctagatgaagat
gaggaggaggaggaagagatgaggaggcgcgaggagaagtccaagtccctcagtctgctg
gagtacaacttgaccatggacacagccaagctcttcatgtcctgccttcacgcctggggc
ctgaacgagcagctggacggcatctgtctggacagactgggcatgctcagaccacactgt
cccatctcctttggcctcatctccagaggaggtcacatgtccctcatgctgcccaccttc
aaggagtctttgctgcaacagttgtccctggccacaggtcggaagctcaccctgtcagac
attgtgggaaaaggaacgtacggagtgtccagggctgtcaccactcagcacctgctgtct
gtcatttcactggccaacactctgatgggaatgaccaacgccacctttgtgggagagcac
atgaagaaagccccggccaggcctcccagaccaggaggaaccccggagtctcctcgcagg
acgccggccgtcccccctcagccctcctgcccggcgctacaggcccagatcaaacaagct
gctgtagctgccgcagccaacatcagctctgccactgctgctggggttccgggggcccct
gggggtcttgcccagggggcctctggttccctcagccccggctctgcttcttataacatc
cccacagtaaatgaaggttggagtcagttggcagccatgcattgtgtgatgcttcctgac
cttctgggcctggacaagtacagaccacctctactggagatgttggcccggagatggcag
gaccgctgtttggaggtgcgagaagctgcacaggcccttctgttggcggagctaagaagg
atcggccaatgtggacgcaaggaaaccatcgacatgtgggcgccttacctccctcagtat
gtggacacggtcagctctcgtaagtgtctcaccgccactgccatcgtgctgctgggcgtc
attggggctgagtttggcgccgagatcgagccaccgaagggttctggtcgggctcgcact
ggtggacaggcacccgagggctttgggttgacgagcggaggatcatccaactactcgctg
gccagacacacgtgtaaggccctgaccttcctgctgctgcagccacccagccccaaactc
cccgctcatagcaccatccgccgcaccgcaatcgatctgattggccgaggctttactgtc
tgggagccgtatatggacgtgtcagcggtgctcatgggactgctcgagctctgtgccgat
gctgagaagcagctcgccaacatcaccatgggcttacctctcaacccaccggctgattct
gctcgctctgcccgtcatgctctctccctcatcgccacagccagacctcctgcattcatc
accacgatcgcaagagaggtccatcgttataacgcagcccaggccaactctcagtcccag
cagaacgttcacaccaccactctggcccgagccaagacggagatactgagggtgatcgac
atcctgatcgagaagatgcccggagatgtggtcgacctgctggttgaggtgatggacatc
atcatgtactgtatcgaaggttctctggtgaagaagaaaggcctgcaggagtgtttccct
gccatctgcaggttctatatggttggctactgcgaccgcagtcaccgcatcgccgtagga
gctcggcagggttctgtggcgctgtacgatgttcggacgggaaaatgtcagaacatccac
ggtcacaaaggtcccatcaccgccgtgtcgtttgcccctgacggtcgttacctggccacg
tactccaacgctgacagtcacatctccttctggcagatgaacaccagtcttctgggcagc
atcgggatgcttaactccgcccctcagctgcgctgcatgaagacataccaggttcctctg
gtgcagccagcgtctccgggctcccagaaccacctgaagctggcccgcctcatctggacg
tccaaccgcaacgtcatcctgatggctcacgatggcaaagagcatcgtttcatgctggtt
accaacaccctacagacaatgttgtga

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