Cynoglossus semilaevis (tongue sole): 103389270
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Entry
103389270 CDS
T04866
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103389270 (vldlr)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103389270 (vldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Phage_tail_terminator_3
Motif
Other DBs
NCBI-GeneID:
103389270
NCBI-ProteinID:
XP_008322837
UniProt:
A0A3P8UNQ5
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Position
14:5498025..5519380
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AA seq
882 aa
AA seq
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MIRSRAARSRLTISTLPLLFSSLQLLLVLLPLLVCSLHTVHGTKTECEASQFQCGNGRCI
PSVWKCDGDEDCTDGSDEDSCVKKTCAEMDFVCQNGQCVPKRWHCDGEPDCEDSSDESQE
ICHMRTCRLNEFSCGAGSTQCIPVFWKCDGEKDCDSGEDEFNCGNITCAPNEFTCASGRC
ISRNFVCNGEDDCGDSSDEVECSLSSCARSEFQCGNSSCIPANWVCDDDVDCQDQSDESP
TRCGRHPTPPAKCSSSEMQCRTGECIHKKWRCDGDPDCKDGSDEANCPTRTCGPEQFKCD
DGNCILGSRQCNGIRDCVDGSDEVNCKNMSQCNGPDKFKCRSGECIEMSKVCNKARDCPD
WSDEPIKECSMNECLLNNGGCSHICRDTKIGFECDCTPGLQLIDHKTCGDINECLNPGIC
SQICINLKGGYKCECHNGYQMDPTSGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVE
QQRNTVALDADFNLQMVFWADLGQKAINSMVLDKRGDIGVHSKVTENVQTPVGIAVDWIY
KNLYWTDLGTKTISVTNFNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKA
GMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSEFL
AHPFALTVFEDRVFWTDGENKAIYGANKFSGADVVTLASKLNDPQDIIVYHELIQLSGTN
WCTEKGENGGCSYMCLPAPQINKHSPKYTCVCPEGQEVAADGLRCRPDTPTTAAPSKDDG
KALTQPPSEANVSTSIQLNSTAKGSAAAWAILPVLLLAMAVVGGYLMWKNWQLKNQKSMN
FDNPVYLKTTEEDLNIDITRHGANVGHTYPAISIVSTEDDLS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtccagagcagccaggagccggctaacaataagcacactgccgctgctcttc
tccagcctccagctgctgctggttctcctgccgctgttggtctgcagtcttcacacagtc
cacggtactaaaacagaatgtgaggccagtcagtttcagtgtggaaacggtcgctgcatc
ccatctgtctggaaatgtgacggagatgaggactgcactgacggcagcgatgaggactcc
tgtgtgaagaagacgtgtgcagagatggactttgtgtgtcagaacggtcagtgtgtcccc
aagaggtggcactgtgacggtgaacctgactgtgaagacagctctgatgagagtcaggaa
atctgccacatgaggacatgtcgtttgaatgagtttagttgtggagctggctccacccag
tgtatccccgtcttctggaaatgtgacggagagaaggactgtgacagtggagaagatgag
ttcaactgtggaaacatcacctgtgcgcccaatgaattcacctgtgccagcggtcgctgc
atctccaggaactttgtgtgtaacggcgaggacgactgtggcgacagctctgatgaggtg
gagtgttctctgtcctcctgtgcccgcagcgagttccagtgtggaaactcctcctgtatc
ccagccaactgggtgtgtgacgatgacgtggactgtcaggaccagtccgacgaatctccg
acccgttgcggccgtcaccccacgccacccgctaaatgttcaagcagtgagatgcagtgt
cgcacgggggagtgcatccacaagaagtggaggtgtgacggagaccccgactgtaaggac
ggcagcgacgaggccaactgtcccacacgtacctgtggaccggaacaattcaagtgtgat
gatggaaactgtatcctgggcagcagacagtgcaacggcatcagagactgtgtggacgga
tcagatgaagtcaactgtaaaaacatgagtcagtgtaatggaccagataagtttaagtgt
cgcagtggtgagtgtattgagatgagtaaagtctgcaacaaagccagagactgtcctgac
tggagcgacgagcccatcaaggagtgcagcatgaatgagtgtctgctgaacaacggcggc
tgctcacacatctgcagagacacaaagatcggctttgagtgcgactgcacccctggactt
cagctcattgaccacaagacctgcggagacataaacgagtgtctgaaccctggaatctgc
agtcagatctgcatcaacctgaagggtggatataagtgcgagtgtcacaacggttatcag
atggacccaacctccggcgtctgcaaagctgttggtaaagaaccctgtctgatcttcacc
aaccgccgggacatccgtcgcctgggtctggagagaaaggagtacactcagatcgtggaa
cagcagaggaacacggtggctctggatgcagactttaacctgcagatggtcttctgggcc
gatctgggccaaaaggccattaacagcatggttctggacaagcgtggagatatcggtgtc
cacagcaaagtcacagaaaatgtccagactccagtgggaatcgccgtggactggatctac
aagaacctgtactggaccgacctggggaccaagaccatctcagtgaccaacttcaatgga
accaaacagaaggttctgtttaacaggggtctgaaagaaccggcctccatcgctgtggat
ccactgtctggcttcctgtactggtctgactggggagaacctgccaagattgaaaaagct
ggtatgaacggagtggaccgacaagttctggtggcaacagacattcagtggccgaatgga
atcaccctggatctcatcaaaggcaggttgtactgggttgactccaagctgcacatgctc
tgtagtgtggacctgaatggagacaacaggaagaaggtgctgcagtcctcagaattcctg
gctcaccccttcgctctgactgtttttgaggatcgtgtcttctggacagatggggaaaat
aaggctatttatggagcaaacaagttcagtggagctgacgtggtaacactggccagtaaa
ctcaacgatccccaggacattattgtttatcacgagctgatccagctctcaggaacaaac
tggtgcacagagaaaggtgagaacggaggctgcagctacatgtgtctgcctgctccacag
atcaacaaacactcgcccaagtacacctgtgtatgtccagaaggtcaggaggtcgccgct
gatggtctacgctgcagacctgacactcccactactgcagctccctcaaaggatgatggg
aaagctctaacgcagcctccctcagaagccaatgtcagcacatcaatccagttgaactcc
acagccaaaggttctgctgctgcctgggccatcctgcctgtcttgctgttggccatggcc
gtggtgggagggtacctgatgtggaagaactggcagctgaagaaccagaagagcatgaac
ttcgacaatcccgtctacctgaagaccaccgaggaggacctcaacattgacatcaccaga
cacggagccaacgtgggccacacctaccctgctatttccatcgtcagcacagaagatgat
ttgtcctga
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