Cynoglossus semilaevis (tongue sole): 103389330
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Entry
103389330 CDS
T04866
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04136
Autophagy - other
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103389330 (atg13)
04136 Autophagy - other
103389330 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103389330 (atg13)
03029 Mitochondrial biogenesis [BR:
csem03029
]
103389330 (atg13)
Membrane trafficking [BR:
csem04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103389330 (atg13)
Atg1 complex
103389330 (atg13)
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103389330 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103389330
NCBI-ProteinID:
XP_016894358
LinkDB
All DBs
Position
14:5875719..5882397
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AA seq
503 aa
AA seq
DB search
MDSELSPQDKRDLDKFIKFFALKTVQVIVQARLGEKISTRSFSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGMGRSMCVEISLKTSEGDSMELETWCLEVNEKCDKDIKVSYTVYNR
LSVLLKSLLAVTRVTPAYKLSRKQGHDFVMLYRIYFGEVQLSGLGEGFQTVRVGVVSTPV
GTVTLSCAYRTNLAFMSNRQFERPTPITGIIVDHFVDSPCGGQRPANMAQPCNYRATDRE
DVGQLAAVQDSQEVCTTSFSTSPPSQLYTSRVYYPPLAELCHPAANPNQALHSGKKYSNV
LTSVHPPPEADTHLTVDQAPNTPFRSADDKGLSQSEEERKVVGRQSISPCDPVESLNAIS
RKVGAFVNKPSTQIKAACLDLPFAAFAPRGLDFGESDPMLQPPDSPPSLSPLQASHVSQG
SEGSGNQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLASLSSQTSSQSMANDLDS
LPEKLAIYEKNIDEFDAFVDMLH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaactaagtccccaggataagagggatttggacaagtttatcaagttcttt
gccctgaagactgtgcaggtgattgtccaagcccgtcttggagagaaaatcagcactcgg
tcattttcatcacccacaggatcggactggttcaatttggcaataaaagacatacctgaa
gtaactcatgaagctaagaaggccctggctggccagctcccaggaatgggacgctccatg
tgtgttgagatctccctaaagacttctgagggtgattcaatggaattggagacttggtgc
ctggaagttaatgagaagtgtgataaggacatcaaggtgtcctatacggtatacaaccgt
ctgtctgtcctccttaaatctctgttggctgtcacaagagtaacaccagcctacaaactg
tccagaaagcagggacatgattttgtcatgctgtacagaatatactttggggaagtgcag
ctgagtggattaggggaaggtttccagacagtgcgcgttggtgtggtcagcactccagtg
ggcacagtcacattgtcctgtgcctaccgtaccaatttggctttcatgtctaacaggcag
tttgagcgaccaactcctatcacggggatcatagtggatcactttgtggattctccctgt
ggcggccagcgtcctgctaacatggctcagccctgcaattacagagcaacagacagagaa
gatgtgggtcagttggcagcagtccaagattcacaggaggtctgtaccacctccttctcc
acgtccccaccctctcagctttatacgtcaagggtttactatccacctcttgctgagctt
tgccatcctgctgctaatccaaaccaggcattacattctggaaagaaatacagcaatgtt
ttgacctcagtccatcctccccctgaagcagacacacatctgacagttgatcaagccccc
aacacaccttttagaagtgctgacgacaaaggtttgtctcagagtgaagaagaaaggaaa
gttgtagggaggcagagtattagtccctgtgacccggtggaatctcttaatgccatttca
aggaaagttggagcgtttgttaataaacccagcacacagataaaagcagcttgtctggac
ctgccatttgcagcatttgctcctcgaggcctggactttggagaaagtgatcctatgttg
cagcctccagactctcctccctccctgtcacccctgcaggccagtcatgtctcccagggc
tcagagggatctgggaatcaggatgattttgtcatggttgactttaaacctgcattctct
aaagacgacttgttaccaatggatctaggcacattctacagagagttccagaacccacca
caactggccagcctctcatcacagactagctctcagtcaatggcaaatgacctggactcg
ttgccagagaaattggccatttatgagaaaaacattgatgagtttgatgcttttgtggac
atgctgcactaa
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