Cynoglossus semilaevis (tongue sole): 103389730
Help
Entry
103389730 CDS
T04866
Name
(RefSeq) runt-related transcription factor 1-like isoform X2
KO
K08367
runt-related transcription factor 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103389730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103389730
Transcription factors [BR:
csem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
103389730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
103389730
NCBI-ProteinID:
XP_008323501
UniProt:
A0A3P8W8E3
LinkDB
All DBs
Position
14:complement(15098190..15127230)
Genome browser
AA seq
486 aa
AA seq
DB search
MVFLWDAKYDPAPGRRYTPPSTTLGSGGKMAEALPLGAQEAAGGAALVGKLRIAERGMVE
VISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGEIPDGTLVTVMAGNDENY
SAELRNATAAIKSQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGP
REPRRHRQKMEEVKPGSLAFSERLTELEQLRRTSMRLTPPHHHHHQPSASARQAAALNSA
PFSSPTHTQITADTRQMQSSPSWSYDQSYPYLGQITTPSVHSANPLSPGRSSLSDLSSRL
TGPDLTAFSDPRMTLERSFTSLPSLSDSRFPDPRVHYSPTAAAFTYAPSHNAVSNGALGL
TMATAMASSPAGRYHTYLPPPYPANTPHQAQNGPFQSTSSPYHLYYSTAAGSYQFSMMAG
GGAGGSGSDSRSPPRILPPCTNASTGSSLLHPSLPSQNEGVGVEVESSHSSSPTNMAAAE
AVWRPY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctgtgggacgcaaaatacgaccctgcccctggccggcgttacacgcccccc
tccaccacgctcggctctggagggaagatggctgaggctttgcccctgggggcccaagag
gctgcaggtggtgctgccctggtgggcaaattgcgcattgcagaacgaggcatggtggag
gtgatctcggatcatcctggagagctggtgaagaccgacagccccaacttcctctgctcc
gtgctgccgacacactggcgatgtaacaagactctacccatcgcttttaaggtggtggct
ctgggcgaaatccctgacggcaccttggtaacagttatggcgggaaatgatgagaattat
tcggcagagctgcggaacgccacagccgccatcaagagccaagtggccagattcaacgac
ctgcgctttgtcggccgcagtggaagaggaaagagcttcactctgactatcacagtgttc
accaacccccctcaagtggccacctaccagagagcgattaaaattacagtggatggtccc
agagagccccgacgtcatcgtcaaaaaatggaggaggtcaaaccaggctccctggcgttc
tccgagaggctaacagagctggaacagctgaggcggacttctatgagactgacgccgcct
caccatcatcaccatcagccctcagccagtgctcgccaagctgcggctctcaactcggcc
cctttctcaagtcccacacacactcagataacggctgatacaagacagatgcagtcgtct
ccttcctggtcttatgaccagtcgtatccatacctgggccaaataaccacaccctctgtt
cactccgccaaccctctatcgccaggccggtcctcactcagtgatctctcttcacggctc
acaggtcctgacctcacagccttcagtgatcccaggatgaccttggaaagatctttcacc
tctctcccctcattgtctgactcccgcttccccgatcctcgtgttcattactctccaacg
gcggctgccttcacctacgctccctcccacaacgccgtttctaatggtgcccttggctta
actatggctacagccatggccagctccccagcagggcggtaccacacctacctacctccc
ccataccctgccaacaccccccaccaggctcagaatgggcctttccagtccacttcttca
ccgtaccacctttactactccactgcagcaggatcctaccagttctccatgatggctgga
ggaggagcaggaggcagcggtagtgactcgcgctccccaccaagaatcctgccaccatgc
accaatgcttcgactggctcctcactcttgcacccttccttaccgagtcagaatgaagga
gttggggttgaggtggagtccagtcacagtagctcccctacaaacatggcagctgctgag
gctgtgtggaggccttactga
DBGET
integrated database retrieval system
