Cynoglossus semilaevis (tongue sole): 103389808
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Entry
103389808 CDS
T04866
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04140
Autophagy - animal
csem04148
Efferocytosis
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103389808 (vps16)
04148 Efferocytosis
103389808 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103389808 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103389808 (vps16)
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103389808 (vps16)
Hops complex
103389808 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
103389808
NCBI-ProteinID:
XP_008323608
UniProt:
A0A3P8VME0
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Position
14:complement(16200686..16206150)
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AA seq
834 aa
AA seq
DB search
MSLMTANWNPLGEAFYRKTELYEMSWNLREGLKDSLLSAAPYGGPIAVLREPHRRSPRSR
PQLEIYSASGVSIASFPWKSGPVIHLGWTVTDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSSWLVL
TQDRQTKVLLSNGPEFFILDNTSCTSVCPPGLGPHYGNIIHMCVSFNYKYLSVFTDSGHL
WTGPSHLQDSLSLVDTKKTSRPEQMVWCRRPKSQEPAVILMWDHLLLVVGVCGETIQFPV
DDPCALVGELDGVRIISSTHQDFLQEVPLVCQDMFKIASMAPGALLLEAHREYQKSSQKA
DEYLREIKEQRMLGEAVIQCVEAAAHEYDTSTQKALLRAASFGKCFLTDQSPDQFVETCR
ELRVLNAVREASVGLPLTHAQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSC
VLKHWASRKVQQKDLSDEAIAHAVCSKVGDTPGVSYAQIAAKAYECGRSELAIKLLDFEA
RSGDQVPLLLRMKRSHLALTKAVESGDTDQIYTVVTVLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQELETLKDLYNQDDDHQELANYYIAASYREKRLETRLSQLQNAVDEFNRAKND
FSAKATEDEMRLLRLQRKLDDEKGLRLLGLSLQDTMETLLSSGLHKQADQIYRDFKVPDK
RYWWLKLKSLAEKSEWEELEKFSKSKKSPIGYLAFVEVCMKHNNTFEAKKYVSRVTAEQK
VKSHLAVGDLEGAAEAAIERRNDAEIGAVLSRCSTTDRLLIDRLNRARAATQRK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatgacagcgaactggaaccccctgggagaagccttttaccggaagacagag
ctttatgaaatgtcctggaacctcagagaggggctaaaggacagtctgctctctgctgcc
ccatacggagggcccatagccgtactaagagaacctcacaggcgttctcccaggtcccgc
cctcagctggaaatctattcagcatctggagtttccattgccagctttccttggaagagt
ggtcctgtcatccatcttggttggacggtcacagatgagttgttgtgtgtccaggaagat
ggatcagttctgatctatgacctgtttggatcttttaagagacactttagtatgggccag
gaagtggtacagagccaggtcctggaggccaaggtctttcactctccatatggaacaggg
gttgccatagtaacagggtcctcccgttttaccctggcaaccaacattgatgacctgaag
ctgcggaggttacctgaggtcccaggtctccagggaaaaccgtcttcatggctggtcctg
actcaggacagacagactaaagtccttctatctaatggcccagaattctttattcttgac
aatacatcttgcacctcggtgtgtcctccaggtcttggtcctcactatggcaacatcatc
cacatgtgcgtgtcctttaattataaatacctgtccgtcttcactgacagtggacatttg
tggacaggcccctcccacctacaggacagcttgagtcttgtggacaccaagaagaccagc
aggcccgaacagatggtctggtgtcgaagacctaaaagccaagaacctgctgtgatcctg
atgtgggaccacctcctcctggtggtgggagtctgtggtgagaccatccagttcccagtg
gatgacccatgtgccctggttggagaactggatggagtccgtataattagctctactcat
caggactttcttcaggaggtacctctggtctgtcaagacatgtttaagattgcctccatg
gctcctggggctctactgctggaggctcaccgcgagtaccagaagtctagtcagaaagca
gatgagtaccttcgtgagatcaaggagcagaggatgctgggagaagcagtgatacagtgt
gtggaggctgcagctcatgagtatgacaccagcacccagaaggccttgctgcgggcggca
tcatttgggaagtgtttcttgactgaccagagtccagaccagtttgtggagacctgcaga
gaactgcgagtcttgaatgctgtcagagaggccagtgtgggtctgccgctgacacatgcc
cagtttaaacagatgaccctgcaggttttgattgacagactggtctacagacagttctat
cccttggccatagaaatctgtcgttacttgaagattccagattatcagggtgtcagctgt
gtcctcaaacactgggcttcacgtaaggtacagcagaaagacctatcagacgaggccatt
gcccatgctgtgtgttcaaaggttggagacactccaggagtttcctacgcgcagattgcg
gctaaagcctacgagtgtggacgcagtgaactcgcaatcaagcttctggactttgaagct
cgctctggagaccaggttccgctgctgctacggatgaagaggagtcacttggctctgact
aaagctgtggagagcggagacaccgaccagatttacacagtggttactgttctgaagaat
gagatgaacagaggagatttcttcatgactctaaggaaccagccagttgccctcagtctc
tacagacagttctgtaagctgcaggagctggagaccctgaaagacctttacaaccaggac
gatgatcatcaagaacttgccaattattacattgctgccagttacagagagaagagactg
gaaacccgtctgtctcagttgcagaacgctgtagatgagttcaacagagccaagaatgac
ttttcagcaaaggcaacagaggatgagatgcgtctccttcgtctgcagagaaaactagat
gacgagaagggactgaggcttctgggactgtccctgcaggacaccatggagactcttttg
tcttcagggctccacaaacaagctgatcagatttacagagacttcaaagttcctgacaag
aggtactggtggctgaaactcaaatctctggcagagaagtcagagtgggaggagttggag
aagttttccaagagtaaaaagtctcctattggctacttggcctttgttgaagtgtgtatg
aaacacaacaacacgtttgaggccaagaagtatgtttccagggtaacggctgagcagaag
gtcaaaagtcacctggctgtgggtgacctggagggggcggcagaagctgccatcgaacgc
aggaatgacgccgagattggggcagtgctttccagatgctccaccacagatcgcctcctg
attgacaggttaaacagagctcgagctgccacccagaggaagtga
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