Cynoglossus semilaevis (tongue sole): 103389966
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Entry
103389966 CDS
T04866
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103389966 (ddx55)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103389966 (ddx55)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
Pre-60S particles
Helicases
103389966 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SBF_like
Helicase_C_2
SART-1
YbjM
HMUDK_HMUD1
Motif
Other DBs
NCBI-GeneID:
103389966
NCBI-ProteinID:
XP_008323848
UniProt:
A0A3P8W068
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Position
14:complement(18255721..18261101)
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AA seq
594 aa
AA seq
DB search
MDNTTDGTWSSLPVKLNDGVLQTLEALTFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIEILLKREEKLKKMQVGALVITPTRELALQISEVMDHFIQKFPQFTQILLIGG
SNPIEDVEKFKEQGANIVIATPGRLEDMFRRKSDGLDMASCVRSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATAAAQKTP
SRLSNYYTICRSEDKFNHLVAFLRQHKHEKQLVFFSTCACVEYYGRALETLIKKVTVCCI
HGKMKQKRNKIFADFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSATAFVHRCGRT
ARIGNQGNALVFLLPMEETYVNFLSINQKCPLQRMSPISDVVDVLDKVKAMSVADRAMFE
RGTRAFVSFVQAYAKHECRLIFRIKDLDFASLARGFALLRLPRMPELKGKTFPNFIETHM
DTDTIRYKDKNREKQRQKILKEKKETPLQKKNFTRNKSWSKQRDRKDRKKRRSEKRKHDE
GSDVDDDDIQELLSDTRLLKKLKKGRITEEDFEKQIAKSKHKTPTTAGSDEERV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgactgacggtacgtggagtagtttacctgttaaactaaacgatggggtt
ttacaaacgttggaggcgctgacgttcacacatatgacacccgtacagtccgcttgtatc
ccgctgtttatgagcaacaaagatgtggctgccgaggcggtgacaggcagtggaaagaca
cttgctttcgtcatccctatcatagaaatactgctgaagagagaagaaaaactgaagaag
atgcaggttggagctctagtaattactccgacaagagaactggcccttcagatcagtgaa
gtgatggatcacttcatccagaagtttccacagttcacgcagattttactgattggtgga
tcaaatccaatagaggatgtggagaagttcaaggaacaaggggcaaacattgtgattgct
acaccaggacgtctggaggacatgttcagaaggaagtcagatggtctggacatggccagc
tgtgtcaggagtttggatgttctagttctagacgaggcagaccgactgctggacatgggc
ttcgaggccagtctgaacaccatactgggctacctccccaagcagagacgcacaggcctg
ttttcagccacgcagacgcaggagctggagaagctggtgcgggccggcctcaggaaccct
gtgaggatcacggtcaaagagaagggcgtggccgccaccgccgctgcccagaagaccccg
tcgagactctctaattactacactatatgtcgatctgaggacaagttcaaccacctggtg
gcctttctgaggcaacacaagcacgagaagcaactggtgtttttcagcacctgtgcctgt
gtggaatattacggccgagctctggagacgctcatcaaaaaggtgaccgtctgctgcata
cacggcaagatgaaacaaaaacgcaacaagatttttgccgactttcgagccttgaaaagt
gggatcttggtgtgcacagatgtcatggcccgaggcattgacatccctgatgtgaactgg
gttctacagtatgatcctcccagcagcgccactgcttttgtccaccgctgtggacgcacg
gcccgtatcggtaatcagggcaacgccctcgtcttcctgctgcctatggaggagacctat
gttaactttttgtccatcaaccagaaatgtccgctccagagaatgtcccccatcagtgat
gtcgtggatgtgctcgacaaagtgaaggccatgtctgtagcggaccgtgccatgtttgaa
cgaggcacgagggccttcgtctcctttgtccaggcgtacgctaaacacgaatgccgtctc
atctttaggatcaaagacctggactttgcctccctggctcgggggttcgccctacttcgc
ctgcccagaatgcctgaactaaaagggaaaacattcccaaatttcatcgagacacacatg
gacaccgacaccattcgctacaaggacaagaacagagagaaacaacggcagaagattctg
aaagagaagaaggagactcctctacagaaaaagaatttcacaaggaacaaatcctggtcc
aaacagagagacaggaaagaccgcaagaaaagaaggtcagagaagaggaagcatgacgag
ggctctgacgtggacgatgacgacatacaggagcttttaagtgacacgcgactcctgaag
aaactgaagaaaggccgaatcacagaggaggacttcgagaaacaaatagcaaagtcaaaa
cataaaacaccaacgactgccggctctgatgaagagcgtgtttga
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