Cynoglossus semilaevis (tongue sole): 103390033
Help
Entry
103390033 CDS
T04866
Symbol
bdp1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103390033 (bdp1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103390033 (bdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
103390033
NCBI-ProteinID:
XP_008323940
LinkDB
All DBs
Position
14:19296197..19311480
Genome browser
AA seq
2382 aa
AA seq
DB search
MFRRSRFSVQPKVTGKSRAAAAPQEAPPTNQEATETTTTTASDSSKTSAVTEIPSAVTQS
TPAASGEVNDQNVDSTSSSAALQRRKRFSVKPKVAPGRPSTQSRTPKSPIKPVLETPAEV
PSSDLDKPSTSDQNESQELQSPQRPSEESTQLKVQSDTTPGSSELPAVAGPEASLQKTGK
QLESQVTDISSRPPVKAQPSLPDKETDEISEKAKTLVSSKSGLSISASASSLSKLLNDPS
DLQRLAKAQKLRELLREEKHKERKLRKSKCRGKEYSLDPAKMTMRDLIHYLPMSNPMKSS
ITDMAPENETVVPSSPGREEPLESAQEPQAPQNDANPTVEDEDGDVEEVEDEEQEDSIMV
PQVKVAEDGSLIIDEESLTVEVQRTKGPNTTQDRDPIFERGSTTTYSSFRTLKMAKPWSA
EETDMFYLAISMVGTDFSMICQLFPLRSRTEIKNKFKKEERENCWRIDKAFRDKRKLDIE
YFSKLLEKILEFQKNKKKLRAITQKNAPKKSQRREKGKKKKSKKLTDIEEEDENEDDDEV
LDLEDEEEGGEKENDNLANEDETSFSKPKRQQKRKTEQDDLNEEPNNNKKKRAAKGETSI
PEHTEAALPENHTSTETSDDVTPTKDTPVKPVELSRMRVAKPLLPLGRKWGKKPPLPSTR
PEESMADEENENVCDGASDQVNKESSPVKQAGLEQSAEADVSSEEEYATVQPPRPTRYGR
MPKPTKPLTYSAKEAEHSDAPAASSVDTAASNLKSKPKCSTKRGRTSKQQSAQESKKPKL
VTLRASQLQYSDDEEETQLEDHEEPEREVDSEDGTACVFVPASLRSPPPVIAEVEETMEE
LDILANMPDVLGISQDALCHDVSWDKAQNQTGTAEPCEHQLDLLVDVIDYLSSEQTEVCE
DEGYNEAAQTLLTISNMMHLPQTAENQSAAQDDVTDELPECSRKPRPHIDLEESSETAVN
SSDGVSQTPEPSNQLCGVSKTVDDTDCSSQIDPSPEESEKHSPQPRKVLPKLKPKPNLAV
VSMTAQPQSQPDNISEPTEHKEDSNTRPVHCPPSETLSSHEEVSEITDSPSVFAPSSDTK
STVSPPKNPSANKESKMTNNELVEQMYHVLPTTRLSVSEEQTLPDIPFEPNISDACLSSA
VLEKREPTQDESESHGNLVESDSLVTVLPTGQNTSEHPASCDLSFSKKEGDEAELSPGGQ
LRRSRSQKVKPVPNIPGTLGTTRSRTPVVEERDESDSSVNKTSQSTSLSAVVTSPNSPCE
ATTELSCMGDEQVQCETSVDAMSFLGQSESKSHPQLTNQDVGSTLATTDDKGLSHSETSG
SCSLLGLVSTADQDLGLVQEISEHAVTQKESPVTQQVESEVKSAVSSRRSRFPRVQPRIP
QTSRSKLQTKKDSEENDSIAAPILSSPKKSNQSVISTSNLPPANNLSPTEEVDRSLAMTK
LQAGQELIPLQESSEHRVTVAVDRSEAQMKFDSDKTGSQAEEVKSCGEAEPHVGQKEENK
VTSPCTSRRRSQKVKPKVNIPQTSRPSKLSPKKAKDVVEIESNPASVSEQGEILTSSENE
TSLGSGSLSVSIPSLDVGSTLTNEQPSTAELERADEKIVGRTCAVGSPLGHYQSENHSLS
DVLFEHSRRNTETASEKAKCRDATSESSNNKVTFDTASARSNRGENVPPIQEKLRNLDAE
VATVSQMEESDALQDVTQSKPTCSKHRMTDSTQDVVILPEKQSEGADTDSASASVQSVEL
STSDKPTLLTVKPKSELGLESTTDSPKASVPQRRRYFPKVKPNLVSSPRRISTTQRQRNS
TDTSDEQPVGIPQIQVERTDKNTQIKGANSPSVEGSTGESAITEANERLDSTGDMNTSSS
GISIATPFIADILKKSVTEHKVSEVSSRERGSTDGEISNNIKVEAGCSRTPPADDSTTAL
GFLSSKEPHASSIQDKEEVGPSSQSSQSELHCSSKPTSKAPQTRRGRLMKPTPNLGRSRS
LQPQNQRTTQDVKDTGAVSVHRPVPEVQPNIQESVKENIPSSSAACLPLDGDSMLVRLTE
TDGQQNEHDPSVDVTFLGCETQEVDISQITPTVTLVERTPQCSTVFPALTTEQLPSDPDE
PFFILSLTEIPVSSSAEMMDTTVETHHYVGDTFTQQQSRDSGQPVAVPVEESPLEDVIKE
NPLNTQEGSTVQPSTSPETEDNMNIAEFSSKTETKQRSPRPPRRAAKLQVKPDTTRTRGS
RTLRVDINQDSDLPQFSMQPQVSVDNRAELDRPGSGPGDDVSEAEIKTENMKTRKSTNGD
PLPGRATSSISKVKTEQSTSIPVASTSQTVASCSHVTKQPGETSTTLTTSSLEESVQQTT
EHSQLCSDVLINKQSCPEHIEEESTTVSEYFFSDIFTPVEED
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgccgttcaagatttagtgttcagcccaaagtcactggcaagagcagagctgca
gcagcaccccaggaagccccgccaacgaaccaggaggccactgagaccactaccacgact
gccagtgacagcagcaaaaccagtgcagtaacagaaatcccatctgctgtgactcagtca
acacctgcagcctcaggggaagtcaatgaccaaaatgtggatagcactagctcctcagcg
gcacttcagagaagaaagcggttttctgtgaagcccaaggtggccccaggtcgcccctcc
acccagagtcggacaccaaaatcccccatcaaaccggtcttggaaacccctgctgaagta
ccgagctcagacctcgataagccaagcacatccgatcagaatgagtctcaagaacttcag
tccccacaacgaccttcagaagaaagcacgcagctcaaagtacaaagtgataccacacct
ggatcttcagaactaccagctgtagcaggtcctgaggcatcactacaaaaaactggcaaa
caattagagagccaagttacggacatttcctctagacctccggttaaagcccagccctct
ctaccagacaaagaaactgatgaaatatcagagaaggccaagactttggtctcatctaag
agtggactgtctatctcagcatcagcttcgtctttgagtaaactcctcaatgatccatcc
gacttacagaggctagcaaaggcccagaagttaagagaactgctcagagaggaaaagcac
aaggaaaggaaactcaggaaatctaagtgtcgtggaaaggaatactctttggatccagca
aaaatgaccatgagagacctcatccattaccttccaatgtccaaccccatgaaatcgagt
attaccgatatggctcctgagaacgaaacagtggttccatcctcaccaggaagagaagaa
cccctagagagtgcacaggaacctcaagccccccaaaacgatgcaaacccaactgtggag
gatgaggatggggatgtagaggaggtggaagatgaagagcaggaagattcgatcatggtt
ccccaggttaaagttgcagaagatggatcactgatcattgatgaagagagtttgacagtg
gaagtccagagaacaaaaggaccaaacacgacacaggatcgtgatcccatctttgagcgc
gggtcaacaacaacatactccagtttcagaacattgaagatggcaaaaccctggtctgct
gaagagacagacatgttctacttggctattagtatggtgggaacggacttttctatgatt
tgtcaactttttcctctgagaagtcgcacagagattaagaacaaattcaaaaaagaggag
cgagagaattgctggaggatcgacaaagcattcagagacaagcgtaagctggacatagag
tacttttccaaactgctggaaaagattttggagtttcagaaaaacaaaaagaaactcaga
gcaatcactcagaagaatgctcccaaaaagagccaaagaagagaaaaggggaagaagaag
aagtctaagaaactgactgatatagaggaagaagatgaaaatgaagacgacgatgaagtg
cttgatttggaggatgaggaggaaggaggagagaaagaaaacgacaacctcgctaatgaa
gacgaaacttcattctcgaagcccaagagacaacagaaaaggaagactgaacaggatgat
ttaaatgaagaaccaaacaataacaaaaagaaaagagctgcaaagggtgagaccagcata
cctgaacacactgaagctgcacttcctgagaaccacacaagcacagagacgtctgacgat
gtgactcccaccaaggacacaccagttaaaccggttgagctctccagaatgagagtggca
aaacctctgctgcccctgggcagaaaatggggtaagaagcctccgctgccatcaacaaga
cctgaagaaagcatggcagatgaagaaaatgaaaatgtgtgtgacggcgcctcagaccag
gtaaacaaggagtcatcgcctgtaaaacaagccggtctggagcagtcagctgaggctgac
gtttcctctgaagaagagtatgccactgttcaacctccgagacccacaaggtatggaaga
atgcctaagcccaccaagcctctaacgtactctgctaaagaggctgaacactccgatgcc
cccgctgcctcatcagtggacacagctgcgtctaacctgaagtctaaacccaaatgttca
accaaaagagggcgaacatcgaaacaacagtctgcccaggagtccaaaaagcccaaacta
gtcacacttcgagcttcccagttgcaatacagtgacgatgaggaggaaacgcagctggaa
gatcatgaggagccagagagagaagtggactctgaggacggcactgcctgtgtctttgtg
cctgccagcctacgttccccaccaccggtgatcgcagaagttgaagaaactatggaggag
cttgatatcttggctaatatgcccgatgtgttgggcatttcccaagatgcactgtgccat
gatgtctcttgggataaggcacaaaatcagacaggcacagctgaaccatgtgaacatcag
ttggacctgctagttgatgtaatagactacctttcttcagaacagacagaggtgtgtgaa
gatgaaggctacaatgaagctgctcaaacactgttgactattagcaacatgatgcatctc
cctcagacagcagagaaccaatcagctgcacaagatgatgtaacagacgaactaccagag
tgttccagaaagcctcggccacacattgacttggaggagagcagtgaaacagcagtgaat
tcgagtgatggagtctcacaaacaccagagcccagcaatcagctatgtggtgtctcaaaa
acagttgatgatacagactgtagctcacaaatagacccaagcccagaggagtcagaaaaa
cattccccacaacccagaaaggtactacctaaattgaaacctaaacctaatttagcagtg
gtttcaatgactgcacagccccaatcacaaccagacaacatatcagagccgacagagcat
aaagaagatagcaacacgcgacctgtccactgtccacccagtgagacattgtcatctcat
gaagaagtctctgaaatcacagattcaccttcagtgtttgccccgtcatctgatacaaaa
tctactgtttcaccaccgaagaatccgtccgcaaacaaagagtcaaaaatgacaaataat
gagcttgttgagcaaatgtatcatgttttgccaacgactcgtctgagtgtctcagaagaa
caaaccctgcctgatattccatttgaacccaatatcagtgatgcatgcttgtcatctgca
gttctggagaagagagaacccactcaggatgagtcagagagtcatggtaacttggtggag
tccgattcacttgtaacagtgttaccaactgggcaaaacacgagtgaacatcctgcatca
tgtgatttgtccttctccaagaaagaaggagatgaggctgagctttcccctggtggccag
ctcagaagatcaaggtcacagaaggtcaaacctgtaccaaacataccagggacattagga
accactcgatcaagaactccagtcgttgaagagcgagacgaaagcgactcttctgtcaat
aaaacgagtcaaagcactagtctttctgctgtcgtaacgtcaccaaactccccctgtgaa
gccaccacagaattgtcatgtatgggagacgagcaagttcaatgtgaaacatcagtggat
gctatgtcttttctaggacagagtgagtcaaaaagtcatcctcaacttacaaaccaagac
gtggggtcaacattggcaaccacagatgacaaagggttaagtcacagcgaaacatctggc
agttgttctctgttgggattggtctcaacggctgatcaggacctgggccttgtccaagag
atcagtgaacatgctgtgacacaaaaagaatcacctgtcactcagcaggtagaaagtgag
gtcaaatcagccgtatcatccagaaggagtcgattcccaagggtccaaccaagaataccc
cagacctcaaggtctaaacttcaaaccaaaaaagactctgaagaaaacgactcgatagcc
gcaccaattttatcatctcctaaaaagtcaaatcaatcagtaatttcaacctcaaattta
ccacccgctaataatctgtctccaactgaggaagtagacaggtcattggcaatgacaaag
ttacaggctggacaagagttgattcctctccaggagagcagtgaacatcgtgtgactgta
gctgttgacagaagtgaggctcaaatgaaatttgactctgataaaactggttcacaagca
gaagaagtaaaaagctgtggggaggctgagccacatgttggtcagaaagaagagaacaaa
gttacatctccctgcacgtctagaagacgatcgcagaaagttaagcctaaagttaacata
ccacagacatcgagaccttccaaactctcacctaaaaaagccaaagacgtagtagaaatt
gaatcaaatccagcatctgtaagtgaacaaggagaaatcctgacttcttctgaaaatgaa
acaagtctgggctcaggttcgctttcagtttcgattccatcattggatgtaggctccact
cttacaaatgaacaaccgtcaactgcagagctggaaagggcagacgagaagattgttgga
cggacgtgtgctgttgggtcacctctaggtcactatcaatcagaaaaccacagcctgtcg
gatgttttgtttgaacacagccgcagaaacacagaaacagccagtgaaaaggccaaatgt
cgtgatgccacatctgagagcagcaataacaaagtgacatttgacactgcctctgcacga
tccaatagaggagaaaatgtacctcctatccaagagaaacttcgcaatcttgatgcagaa
gttgcaactgtcagtcaaatggaagagagtgacgccctccaagatgtaactcagtcaaaa
cccacctgctctaaacatcgaatgacagattctacccaggacgtcgtcattcttccagaa
aaacaaagtgaaggtgctgacactgacagtgcttctgcttccgttcagtcagtggaactg
tccacctctgacaaaccaacattactgactgtgaaacctaaatctgagcttggacttgaa
agcaccactgatagtcctaaggcaagtgtccctcaaagaagaaggtactttcccaaggtc
aaacctaatttggtgtcctctcccagacgcatatcgaccacacagcggcaaagaaacagc
actgacacctcagatgaacagcctgttggcattcctcagatacaagtggaacgcacggac
aagaatacacagataaaaggtgcgaacagtccgtcagttgaaggcagcactggagaatct
gcaattacagaggccaacgagagacttgacagcacaggtgatatgaacacatcctccagt
ggcatttccatagcaacaccatttattgctgacatcctgaaaaagtcagttactgaacat
aaggtcagtgaagtctcatcacgagaaagaggttcaacagacggtgaaatatccaacaat
atcaaggtggaagctggctgctccaggacaccaccagcagatgattcaacgacagcttta
ggttttctctcctccaaagaacctcatgcctcctccatacaagacaaagaggaagtaggc
ccatcttcccaaagcagtcagtcagagcttcactgctcttcaaaacctacaagtaaagcc
ccacaaacacgcagagggagactgatgaaacccacgcccaaccttggacgcagtaggtct
ttgcaacctcagaaccagagaaccacacaggatgtcaaagatactggtgcagtgtcagtc
cacagacctgtgcctgaagtacaacctaatatccaagaatcagtgaaggagaatattcca
tcttccagtgcagcgtgcctccctcttgacggtgactccatgttggtccgcttgacagaa
actgatggtcagcaaaatgaacatgacccatctgttgatgtaacttttctgggatgtgaa
acacaagaagttgacatttcccagatcacaccaacagtgactttagtggagagaactcct
cagtgctccaccgtgtttccagccttgactacagagcagttgccttcagatccagacgag
ccgtttttcatcctctccctcactgagattccagtcagctcatcggcagagatgatggac
accaccgtggagactcaccattatgtcggagatacatttacgcagcaacagagcagagat
tctggacagcctgtagcggttcctgttgaggaatctcccttagaggatgttatcaaggaa
aatcccctaaacacacaggaaggttcaacagtgcagccatccacatcaccggaaactgaa
gataatatgaatatagctgaattttcttccaaaacggagacaaagcagagatcgccgagg
cctccaagaagagcagccaagctccaggtcaagcctgacactaccaggacacgtggcagc
aggactttgagagtcgacatcaaccaagactctgaccttccacagttttccatgcagccg
caagtctcagtagacaatagagctgagctggaccgtccagggagtggtcctggagatgat
gtttcagaagcagaaattaagaccgaaaatatgaagacaaggaaaagtactaatggtgat
cctctccctggccgagcaacatccagcatttctaaggtcaaaactgaacaatccacctcc
atccccgtggcttcaacgtcacaaactgttgcttcctgtagccatgtgaccaagcagcca
ggggaaacctcaacaactctcactacttcatctttagaagagtctgttcaacagaccact
gaacacagtcaactgtgctcagacgtactcataaacaaacagtcgtgtccagagcacatt
gaggaggagtccaccaccgtgtctgagtacttcttcagcgacattttcactccagtggaa
gaagactga
DBGET
integrated database retrieval system
