Cynoglossus semilaevis (tongue sole): 103390069
Help
Entry
103390069 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103390069
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103390069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103390069
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103390069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
fn3_2
NDNF
NDNF_C
Fn3_ELFN
EGF
hEGF
YlzJ
Motif
Other DBs
NCBI-GeneID:
103390069
NCBI-ProteinID:
XP_016894385
LinkDB
All DBs
Position
14:complement(19898004..19941493)
Genome browser
AA seq
2002 aa
AA seq
DB search
MGPTVLLSCLLLTSLLSVSEAGLVKKILRHRRQAPAPRKQHNITLPTVDGPVIFNHVYNI
NVPGSSRCSVDVDAGESTSVQPKDEPASSGRHITEQIVNGENQIVFTHRINIPRQACGCT
EDLPGVKELLNRLEILEGEVSALRSQCSSGSGGCNAQVTGDVAVKPYCNGHGNYSTDTCG
CVCAPGWKGTNCTEPECPSNCLDRGLCVDGKCQCFKGFSGENCSLEVCPVDCGAHGRCVG
SVCVCSDGFLGENCSETKCLNNCQGRGQCSDGNCVCDDPWTGADCSELICPKHCNDHGRC
VNGTCYCDEGYTGEDCSERTCPNHCQGNGFCVDGKCFCSAGYSGEDCSVLTCLHDCNGRG
TCFNGMCICDTGYQGEDCSQLACLNNCNNRGQCINGQCACDVGFQGADCSELSCPRDCRQ
RGRCVNGQCVCDEGYAGEDCSVKTCPANCHGRGECIDGLCACHAGFTGVDCSELSCPNNC
HSRGRCVGGQCVCDEGFSGEDCSQKACPNDCMAQGQCLDGVCVCKEGYSGDDCSILACPE
NCNDRGRCIKGKCSCTSGYEGESCEKLSCLNNCQDKGRCVNGQCVCDEGYIGVDCSDVSP
PKNLTVDEVTHKTVDVSWNNEMLVTEYLVTYVPTSPGGLLQEFTVSGDKTKATVEELEPG
IEYLISVYAVLSNKRSVPVSARVATALPQAEGIRFKSVRETSVEVTWDQLDISFDGWEIY
FRNTKEENGKIVNVLPSNQNQFLQSGLGPGQEYEVSINIIKNNTKGPQTTKTVTTKIDSP
SQVEVKDVTDLSALVLWSQPVAPVDGVTMSYGPTSDPSDKIRAVIAPPDKQYSIDGLRPD
TEYMVSLTSSSGNMTSEPVNTTFTTDLDAPKDLQAKSKTDTSITLEWTNSKANVSNYRVK
YSPLSGAGHGEMVFPREPGNTTTATITGLIPGTEYGVGVTAMKNERESLPATGNTETDID
PPRDFEELETTETSVSLQWQKPQAKITGYRLVFVSKDGEEEEVEIPPTATTHVLLNLTPA
VSYNLTLTAERGQKKSPPATLTTSTASFTFYLAGSDTHELAPTAGSEDNVISFVNLDLSE
FSGMEPEDDELGSLTVSGVTSDGFDLTWKLKAPSLYHSFTIEYKDTQRVWNVKKIKVPGS
ATGSRIQGLTASTEYEIKLYGVTSSQRSVLLETVAVTAPAPTSPHVLTLKMKAATTTTQS
ALDNDTVLTADPLRSVNTEAPPTSESVVMSSQTESEKPELDLLANLTVANVTSTSINLAW
SAPDEVFESFVVELGSPSEERVTTLAGNVKNAEIVGLSPSTYYNVTVHGLVEGKRSLPLK
VYAATAEELRPGVLNLTISDISWDGFTASWSPTDWDFDSFVIEVTNLENFAQSQNLTLSG
DAFSLGISGLNPNTSYIVGLYGMYKGTVLSPVYSEATTEAEPEVDHLFVSDISADSFRLS
WAADEDMFDRFVIKIRDSKRLAHPREYSVSGDERTKVLAGLMSGTEYEIELYGVTLDQRS
QPITGVAQTGLSTPRGLHFSQVTDSTAIVHWSMPFSLVDSYRVAYMPFEGGSPMTVTVDG
SVFEALMHNMIPGKTYQVTVTAVKGLEESDASTDTVTTALDRPQGLTALNVTDTSALLVW
QPSVATVDGYIISYTADSVSSVMEQVSGNTVEFEMGSLVPGTHYTVAVHAIKESQRSDSA
VTEFSTDVDPPRELKVTHIQTDSATLTWKPPQAAVTGYTLTFSSADGVIREVVLSPTASS
YSIAQLTGSTEYSVRLQAVAGAQKSGSVATVFTTTGKLFRRPXDLGXLLLNGEKTSGLYK
IYVGGEDGQSLQVYCDMTTDGGGWLIFLRRQNGKLEFYRNWKNYTAGFGNMNDEFWLGLS
NLHKITSSGHYELRVDLRDQGDLAYAQYDKFTIAEPRTRYKLYIGGYSGTAGDSLIYHQG
RPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDTSHSKGINWFHWKGHEHSI
EFAEMKIRPSNFRNFESRKKRS
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggggccaactgttctgctgagctgcctcctcctgacgtccttgctcagcgtatcagaa
gctgggctggtgaagaaaatcctacgtcatcgacgacaggcgccggctcctcgtaaacaa
cataacatcaccttgcccaccgtggacggccctgtgatttttaatcacgtctacaacatc
aatgttcccggcagctctcggtgctcagtggatgtggacgcgggagaaagcacatcagtt
caacccaaagatgaacctgcgtcatcaggccgtcacatcactgagcaaatagtcaatgga
gagaaccagatcgtcttcactcaccgcataaatatacctcggcaggcctgcggctgtact
gaggacctgcccggcgtgaaagaacttctgaaccgactggagatacttgagggagaagtc
tcagcgttgagaagtcagtgcagcagtgggagtggcggctgcaacgcacaggtcacaggt
gatgttgcagtcaagccttactgcaacggccatggaaactacagtactgacacctgtggc
tgtgtatgtgcgccaggatggaagggaaccaactgcaccgagcctgagtgtcccagtaac
tgcctggaccgaggcctctgtgtggacggaaagtgtcagtgcttcaaaggcttctctgga
gagaactgctcgttggaggtctgccctgtggactgtggagctcatggccgatgtgttggc
agcgtctgcgtctgctctgatggtttcttgggggaaaactgctccgagacaaagtgcctg
aacaactgtcaaggccgcggccagtgcagtgatgggaactgtgtgtgtgacgatccctgg
actggtgctgactgctcggagctgatctgtcccaaacactgcaatgaccacgggcgctgt
gtgaatggaacctgctactgtgatgagggctacaccggggaggactgcagtgagcgcaca
tgtcccaaccactgccagggcaacggcttctgtgttgatgggaaatgcttctgcagtgca
ggctacagtggggaggactgctcggtgctcacctgcctgcacgactgtaacggcagagga
acctgcttcaatggcatgtgtatctgcgacacaggttatcaaggtgaagactgcagccag
ttagcgtgtttgaacaactgcaacaacagaggccaatgcataaatggacagtgtgcatgc
gacgttggtttccagggagccgattgttccgagctctcttgcccccgggactgcagacag
agagggcgctgtgttaacggccagtgtgtttgtgacgaaggatacgctggggaggactgc
agcgtcaagacctgcccagcaaactgtcatggccgcggcgaatgcatcgacggactatgc
gcgtgtcacgcagggttcactggtgtggactgcagcgaactgagctgcccgaacaactgc
cacagccgcggccgctgcgtcggcggtcagtgtgtttgtgatgaaggcttctcaggagag
gactgcagccagaaggcctgtcccaacgactgcatggctcaaggccagtgtttagatggc
gtatgtgtctgtaaggaaggttactctggagacgactgctctattctcgcctgtccggag
aactgcaacgacagggggcgatgcatcaaaggaaagtgctcgtgtacgagtggatatgaa
ggagagagctgtgaaaagctaagctgcctgaacaactgtcaggataaaggccgctgtgtg
aacggtcagtgcgtgtgtgacgagggctacatcggggtggactgctcagacgtgtcgcct
ccaaagaaccttactgttgatgaggtcacccataaaactgtggacgtgtcttggaacaat
gagatgttggtgacggaatacctggtgacgtacgtgcccacctcacctgggggtctcctc
caggagttcaccgtgtctggagacaaaacaaaagccactgttgaagaactggaacccggc
attgagtatctaattagtgtttatgccgtgctgagcaacaagaggagtgtccctgtcagt
gccagggtcgctacagctctgccccaggcagaaggtattaggttcaaatctgtgagagag
acttcagtagaagtgacgtgggaccagctggacatctccttcgatggctgggagatctac
ttccgcaacacgaaggaagaaaatggaaaaattgtcaacgtccttccgtccaatcaaaac
cagtttttacaatcaggtctcggaccaggtcaggagtacgaggtctccatcaacatcatt
aagaacaacacgaaaggaccacaaacgaccaaaaccgtcaccaccaagatcgacagcccc
agccaggtagaggtgaaggatgtgacagacttatcagcattagtgctctggtctcagcca
gttgcacctgtggacggtgtcactatgtcctacggacccacctctgacccctcggacaaa
atcagagcagtgattgcccctcctgacaagcagtacagcatcgatggtctgagaccagac
actgagtacatggtgtcactcacctccagcagtggaaacatgaccagtgaacctgtcaac
accaccttcaccactgacttagatgccccgaaggacctgcaggccaagtccaagacagac
accagcatcactttggagtggaccaacagtaaggctaacgttagcaactatagagttaaa
tacagcccactctcaggagccggtcatggtgaaatggtgttcccacgagaaccaggaaac
acaacgacagcaacgatcactggtctgattccagggaccgagtacggtgttggtgtgact
gccatgaagaatgagagagaaagcctcccagcaactgggaacacagaaactgacattgat
cctcccagagatttcgaggaactggaaaccacagagacttccgtgagtctgcagtggcag
aaaccccaggccaaaattactggttacaggctggtgtttgtctccaaagacggagaagag
gaggaggtggaaatcccacccacagccacgacccatgtcttactgaatttgactcctgcc
gtaagctacaacctcacgttgaccgcagagaggggtcagaagaagagtccacctgccacc
ttgactacatccacagcctcatttacattttacttagctggatcagacacccatgagcta
gcccctactgcaggttcagaggacaatgttattagctttgtgaatttagatctctctgag
ttctccgggatggagcctgaggatgatgagctcggatcattgaccgtttcaggcgtcacg
tctgatgggtttgacctaacgtggaaacttaaagctcccagcctttaccatagtttcaca
atagaatataaagacactcagcgagtatggaacgtgaaaaagatcaaggtccctggatca
gccactggctctagaatccaaggcctgactgcatcaacagagtatgaaataaaactttat
ggagtaacaagtagccagagatctgtgctactagaaactgtagcagtaacagcgccggcg
cccacttctccacatgtgttaacgctgaaaatgaaagctgcaacaacaaccacacagtct
gctctggataatgacacagttttaacagcagatccactccgttctgtgaacactgaggcc
cctcccacttctgaaagtgttgtaatgagctcacagactgagtctgaaaaaccagagctg
gatttactggccaacctcacggttgcaaacgttacctccactagcattaacttggcctgg
tcggcacccgacgaggtgtttgaaagttttgtggtggagctgggttctccatcagaggaa
cgtgtgaccacattagctggcaatgtaaagaatgctgaaatagtgggtttgtcgccctct
acatactataatgtaacagtgcatgggctggtggagggaaagcgctctttgcctcttaaa
gtttatgctgccacagcagaggagctgaggccgggggtgttgaacctcacgatctctgac
atttcatgggacggcttcactgcctcctggagtcccacagattgggactttgacagcttt
gtcattgaggtaaccaacctggagaattttgcccagagccagaatctgacactgtcggga
gatgcattcagcctgggaatctctgggctgaatcccaacactagctacattgttgggctg
tatgggatgtataaaggcaccgtcctcagtcctgtgtacagtgaagccaccacagaggca
gagcctgaggtggatcatctcttcgtctctgacatcagtgctgacagcttccgtctgtcc
tgggcggctgatgaagacatgtttgacagatttgtgatcaaaataagagacagcaaaaga
ttagctcaccctcgagagtacagcgtcagtggtgacgagcgaaccaaggtcctagccgga
ctcatgagtggcactgagtatgaaatcgagctttatggtgtcactctggaccaacggtcc
cagcctatcactggggtggctcagacaggcctaagcactccacgaggccttcacttttct
caggtgaccgactccacggctatagtccattggtcgatgcctttctctctggtggacagc
taccgtgttgcctacatgccctttgaaggaggaagtccgatgacagtgacagtggacggc
agtgtgtttgaagctctgatgcacaacatgatccccggcaaaacctatcaggtgacagtc
actgctgtcaaaggtctggaggaaagtgacgccagcactgacacagtcaccacagctctg
gacagacctcagggtctgactgcccttaatgtcaccgacacgtccgccctgctggtctgg
cagccgtctgtggccactgttgatggctacatcattagctacaccgctgattcagtgtcg
tcggtgatggagcaggtttctggaaacaccgtggagtttgagatgggttcactggttcct
ggaacccattacacagttgcagttcatgccataaaagaatctcagaggagtgactctgct
gtcactgagttcagcacagatgtggaccctcctcgtgaactgaaggtcacacacattcaa
acggacagtgcaactctaacctggaaacctccgcaagctgccgtcactggttacactctg
accttctcttctgccgacggtgtcatcagggaagtggtgctaagcccaacagcctcgtcc
tacagcattgctcagctaactggttccacagagtacagtgtgagactgcaggccgtggct
ggagcccagaagagtggatctgtagccactgtcttcacgaccactgggaagctgtttcga
cgacctncggacttgggttagctcctgctgaatggagagaagacttctggtctgtacaaa
atctatgtgggaggagaagacggccagtcgctccaggtttactgtgacatgaccacagat
ggtggaggatggctgattttcctcagacgccagaatggaaagctggaattctaccggaac
tggaagaactacactgctggatttggtaacatgaatgatgagttttggctgggtctgtcc
aacctccataaaatcacatcttcaggtcattacgaactacgggtcgacctgagagaccag
ggcgacttggcctacgctcagtatgacaagttcaccatcgcagagccgagaacacgctac
aaactctacataggagggtacagtggaacagcaggtgactccctgatataccaccagggg
cgccccttctccacctatgacaatgataatgacatcgctgtcaccaactgcgccctgtcg
tataaaggagctttttggtataaaaactgtcaccgtgtcaacctgatggggaaatatggg
gacaccagccacagtaagggaatcaactggttccactggaagggccacgaacactcgatt
gaatttgcagagatgaagattagaccgtccaacttcaggaactttgaaagcagaaaaaaa
cgatcatag
DBGET
integrated database retrieval system
