Cynoglossus semilaevis (tongue sole): 103390403
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Entry
103390403 CDS
T04866
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X3
KO
K14308
nuclear pore complex protein Nup54
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103390403 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103390403 (nup54)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103390403 (nup54)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
FAM92
Motif
Other DBs
NCBI-GeneID:
103390403
NCBI-ProteinID:
XP_008324464
UniProt:
A0A3P8UKW0
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Position
14:27527353..27536491
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AA seq
572 aa
AA seq
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MAFSFGGATANTATSAPGFSFGSFGAKTTASNAFGFGSTAATTTTTASSGFGTLTAPGFG
TATTTAAAPATGFSFGSTNTGTFGGFGATTTAAAVPQGSTFSFTNPSNTTGGLFSNTQNK
GFGFSTGLGTGTGAAATGFGATLGSTGLGGFGGFNIQSTQPQQGSLFGPQAHQQGQNQPT
QLFQQVTALSALTLLGDERDSILAKWNQLQAYWGTGKGFFSNNNPPVEFNQENPFCRFKA
VGYSCVPLSKDEDGLVILILGKREADVRAQQQQLVESLHKVLGNHQTLAVNVDDVKALPS
DQTEVIVYVVERSLNGTSKRIPATTLFNFLEQANIKVQLSQIGVARSVPRTELSPAQLKQ
LQQNAPTGVDPIIWEQAKVDNPDPEKLIPVPMVGFRELLCRLQIQEQMTKQHQTRVDIIA
NDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKCGYAIQVDEEHLRVQLD
TIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLS
HLISVIKDDLEDIKLIEHGLSEGGHMRGGILS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgccaccgcaaatacggccacaagcgccccggggttttct
tttgggtcatttggtgcaaagacgacagcatctaatgcatttggctttggctcaacagcc
gccaccactacgaccaccgcctcgtccggatttggcactctcacagcccctggttttggg
acagctaccaccactgctgctgcaccagcaacaggatttagttttggctccaccaatact
ggcactttcggtggctttggagcaacgacaactgctgctgccgtaccacaagggtctaca
tttagtttcaccaatccctcaaacaccaccggaggcctttttagtaacacacagaacaaa
ggctttggattctccactggtctcggtaccggcaccggtgctgcagccactggatttggc
gctacattaggatcaacaggtctaggtggttttggaggctttaacatccagtcaactcag
ccacaacaaggaagcttgtttggcccacaggcccatcagcagggtcagaaccagcccacg
cagcttttccagcaggtcaccgctctctcggctctcaccttgttaggagacgaacgtgac
tccatcttggccaagtggaaccagctgcaggcttactggggcacaggcaaaggcttcttc
agcaacaacaacccccctgtagaatttaaccaggagaacccattctgccggttcaaggcc
gtgggctatagctgtgttccactcagtaaagacgaggatgggttagtcattttgattctg
ggcaaaagggaagcggacgtgcgggcccagcagcagcagctggtggagtctctacataag
gtcctgggaaaccaccaaacactcgctgtcaatgtagatgatgtcaaagctctaccaagt
gaccagacggaggtgatcgtttatgtggtggagcgttccctcaatggcacctccaagcga
atccctgccaccacgctcttcaacttcctggagcaggccaacatcaaggtgcagctctca
cagatcggagtggccaggtctgttccccgcacagagctgtctccagctcagctcaaacag
ctgcagcagaacgcccccacaggtgtggaccccataatttgggagcaagccaaggttgac
aaccctgaccctgagaagttgataccagttcctatggtgggcttcagggagcttctgtgc
cggctgcagatccaggagcagatgaccaaacaacatcagaccagagtggatataattgcc
aatgacattagtgaactgcaaaagaatcaggcgaccacggtggcaaagatcgcccagtac
aagaggaaactgatggatctctcccacagagttctacaggtgctgattaaacaggagatt
cagaggaaatgtggttacgctatccaagtggacgaagagcatctgagagtgcagctggac
accattcagtctgaactcaacgcccccacgcagttcaagggccgtttgaatgaattaatg
tctcaaatccggatgcagaaccactttggagccgtgaggtcggaggaacgctacagtgtc
gacgcagacctgctgcgagaaatcaaacaacacctgaagcagcagcaggacggtttaagc
catctgatcagtgtcatcaaagacgacttggaggacatcaaactcatagagcatggcctg
agcgagggcggtcacatgagaggaggaatcctgagctga
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