Cynoglossus semilaevis (tongue sole): 103390531
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Entry
103390531 CDS
T04866
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103390531 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103390531 (dhx15)
03009 Ribosome biogenesis [BR:
csem03009
]
103390531 (dhx15)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103390531 (dhx15)
Spliceosome [BR:
csem03041
]
Complex A
U2 snRNP components
U2 related factors
103390531 (dhx15)
Complex B
103390531 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103390531 (dhx15)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
90S particles
Helicases
103390531 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
Flavi_DEAD
AAA_29
nSTAND3
AAA_25
GvpI
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
103390531
NCBI-ProteinID:
XP_008324643
LinkDB
All DBs
Position
1
Genome browser
AA seq
741 aa
AA seq
DB search
MARRHFDRDRGRDKWSKDRDRDRYQDRDRERDVKSSGVHNNNNPAAFSAGILKQNPLQQQ
INPFTNLPHTPRYYDILKKRLQLPVWEYREPFTDILMRNQSFVLVGETGSGKTTQIPQWC
VDMVRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVVLGQEVGYSIRFEDCSSAKTVLK
YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRQDLKVIVMSAT
LDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEQDEGDVLL
FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQKIFEPPPPNKPSGAIG
RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG
RTCPGKCFRLYTEKAYKTEMQDNTYPEILRSNLSSVVLQLKKLGIDDLVHFDFMDPPAPE
TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAML
SVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQNHESTQWCYDNFVNYRSL
MSADNVRQQLSRIMERFSLPRRSTEFNSRDYYTNIRRALVTGFFMQVAHLERTGHYLTVK
DNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIASQYYAMSNFPQC
EAKRQLERIIAKLSSKEYSQY
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgtcactttgacagagacagaggccgtgataaatggtcaaaagacagggac
cgtgaccggtatcaagaccgtgacagagaaagggatgtgaagtcgtctggggtgcacaac
aacaacaacccggctgcattcagtgcaggcatcctgaagcagaaccctttacagcagcaa
atcaaccctttcaccaacctgccccacacgccgcgctactatgacatcctcaaaaagagg
cttcagctgccggtgtgggagtacagagagcccttcactgacatcctgatgcggaaccag
tcttttgtgcttgtaggagagacaggttctggaaaaaccactcagatccctcagtggtgt
gtggacatggtgcgttcactgccaggaccgaagagagcagtggcctgcactcagccgagg
agagtggcagccatgagtgtcgctcagagggtggccgacgagatggatgtcgtgctgggc
caagaggtcggctattctattaggtttgaggactgcagctctgccaagactgttctcaag
tacatgacagatggaatgttgctgcgggaggccatgaacgaccccctgctggagcgctat
ggtgtcattatcctggacgaggcccacgagcgcacactggctacagacatcctcatgggg
gtcctgaaggaagtggtccgtcagagacaggacctaaaggtcatcgttatgagtgccaca
cttgacgctggtaagttccaggtgtattttgacaactgccccctgctgaccattcctgga
cgtacccaccctgtagagattttctacacacctgagccagagagggactacctggaagca
gccatcaggactgtcatccagatccacatgtgtgagcaggatgaaggggacgttttgctg
ttcctcactggacaagaggaaattgacgaagcctgcaagcgaatcaagcgggaggttgac
gatttggggccagaagttggtgatatcaaaatcatcccgttgtactccacactgcctcca
cagcagcagcagaagatcttcgagccacccccacctaataaaccaagcggagcaatcgga
aggaaggtcgtggtgtcgacaaacattgcagagacatccctgaccatcgacggtgtggtg
tttgtaattgatcccggatttgccaagcaaaaggtgtataacccacgtataagagtggag
tcgctcttggtgacagccatcagtaaggcatcagcgcagcagagggcgggtcgcgccggg
agaacctgtccaggaaagtgtttccgcctgtacacagaaaaagcctataagacagaaatg
caggacaacacctacccagaaatcctaaggtcgaatttgtcctcagtggtgctgcagcta
aagaagcttggcatcgatgacctggtgcactttgacttcatggatccaccagccccagag
accctgatgcgagccctggagttgctgaactacctggcagcgctcaatgacgacggtgac
ctgacggagctgggttccatgatggcagagttccctctggacccccaactggccaagatg
gtcatcgccagctgtgaattcaactgttccaacgagatcctttccatcactgccatgttg
tcagtcccacagtgcttcgttcgacctacggaggctaagaaggtagctgacgagtccaag
atgcgctttgcccacattgatggagatcacatgacgctgctcaatgtctaccacgccttc
aaacaaaaccatgagtccactcagtggtgctatgacaactttgtcaactaccgctcactg
atgtcggctgacaatgtacgtcagcagctgtccaggatcatggaacgcttcagcctgccg
cggcgaagcacagagttcaacagcagagattattacaccaacatccgccgagccctggtc
acgggcttcttcatgcaggttgctcacctggagcggactggtcattaccttacagtgaag
gacaaccaggtggtgcaactgcacccttccactgtgctggaccacaagcccgagtgggtg
ctgtacaatgagtttgtgctcaccaccaagaattacatccgcacgtgcactgacatcaag
ccagagtggttggtgaaaattgcctcgcagtactacgcgatgagtaactttccccagtgc
gaagcgaagagacagttggagcgcatcattgcgaaactctcatccaaggaatacagtcag
tactga
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integrated database retrieval system
