KEGG   Cynoglossus semilaevis (tongue sole): 103390574
Entry
103390574         CDS       T04866                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03420  Nucleotide excision repair
csem04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103390574 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103390574 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csem04121]
    103390574 (cul4b)
   03400 DNA repair and recombination proteins [BR:csem03400]
    103390574 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103390574 (cul4b)
Ubiquitin system [BR:csem04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103390574 (cul4b)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103390574 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103390574 (cul4b)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103390574 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW TFIIE_alpha
Other DBs
NCBI-GeneID: 103390574
NCBI-ProteinID: XP_016894627
LinkDB
Position
15:complement(1195247..1205352)
AA seq 835 aa
MFPTSLSSPNPPAPPTQEARATAADGAITSARKRKINGPEREEAADSISSCSSSSPPKTL
GSPSSSSPTQLHLHKKLRFEDSVDLIGLDVKMAEEAAAAAAASCSNNRSSKSMFLPGTVP
IHANGLTKTVGSAGTGTFSSSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAVEAIQ
NSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKK
IDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRSYIISDLKVQNKTID
GILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQER
EVPEYLHHVNKRLEEESDRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDEN
RIQDLSLLYQLFSRVRGGVQALLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDH
IIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIGEKRKSIYIVLLMLLKDVAKRLLVG
KSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQHMQCQNIPGNIELT
VNILTMGYWPTYIPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKE
GKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIEDNELRRTLQSLACGKARVLAKIPK
SKDVEDGDKFSCNNDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIM
KMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgtttccaacaagtttatcttcccctaaccctccagcaccgccaacccaggaggcaaga
gctacggccgccgatggtgccatcacttcggccaggaagaggaaaataaacggcccggag
cgggaagaagccgccgactccatctcctcctgctcctcctcttctcctccaaaaacactc
ggttccccctcctcgtcctctcccactcagctgcatctgcacaagaagctgaggttcgag
gattccgtggatctgattggactggatgtgaaaatggctgaagaagctgctgctgctgct
gctgcttcatgttccaacaacaggagcagtaaatccatgttcttacccggaaccgttccc
atccacgccaatggacttaccaagactgtaggctctgctggtactggtaccttttctagc
agtaaacctggagctgccaagaaactggtcatcaagaactttagagaaaaacccaagttg
ccggagaactacactcaggagacgtggcagaagctgaaggaggcagtggaagccatacag
aatagcacttcaatcaagtacaatctggaggaactctaccaggctgtggaaaacctctgc
tcacataagatttctgccaagctttacaaacagctgagggctgtgtgtgaagatcacata
aaggcccagatcgatcagttcagagaggatgctctggacagtgtgctgttcctcaagaag
atcgacaagtgttggcaggatcactgcagacaaatgatcatgatcagaagtatatttctg
tttctggaccgaacttatgtcttacagaactccatgctaccgtcgatctgggacatgggc
ctggaactgttcagatcctacatcatcagtgacctgaaggttcagaataaaaccattgat
gggattctgttgctgatagagcgggagagaaacggagaagccatcgaccgcagtctgctg
aggagtctgctgagcatgctgtccgacctgcagatttatcaagactcttttgaacaaaga
tttttggaggaaacaaatcgtctgtatgctgcagaggggcagaggctgatgcaggaacga
gaggtgccagagtatcttcatcatgtgaacaagcgtctagaggaggaatcagacagagtc
attacatatctggaccagagcacacaaaaaccactcattgctactgtggagaaacagcta
ctgggggaacatctgactgcaactctgcagaaaggtctgactcatctgctggacgagaac
agaatccaggatctgtctcttctgtatcagctcttcagtcgcgttagaggcggtgttcag
gctctgctgcagcactggatcgaatacatcaaggcttttgggagcacaatcgtcatcaac
cccgaaaaggacaagaccatggtccaggagctgctggacttcaaggataaagtagatcac
atcattgacatctgcttcatgaagaacgagaagtttgtcaatgccatgaaggaggcattt
gaaacatttatcaacaagaggccaaataaacctgcagagctgataggtgaaaagagaaaa
tcaatatacattgtccttttaatgctgctaaaggatgtggccaaaaggttgctggtggga
aagagtgcttctgttgacgccgagaaatccatgttgtcaaagctcaagcacgaatgtgga
gctgctttcaccagcaaattggaaggaatgttcaaggacatggagctttctaaagacatc
atggttcaattcaaacagcacatgcagtgtcagaacattccgggaaacattgagctgacc
gtcaacatcctcaccatgggctactggcccacctatatccccatggaggttcatctccct
cctgagatggtgaagttgcaggagatctttaagaccttctaccttgggaaacacagtggc
aggaagctgcagtggcagtcaacgctgggccactgcgttcttaaagctgagttcaaggag
ggtaagaaggagttgcaagtctcactatttcaaaccctggttttactgatgttcaatgag
ggagaggagttcacactggaggagatcaaactggccacgggaatagaggacaacgaactg
cgcaggactctgcagtctctggcctgcggaaaagctcgagtccttgcaaaaatccccaaa
agtaaagacgtggaggatggagacaagttctcttgcaacaacgacttcaaacacaagctg
ttcaggatcaaaatcaaccagatccagatgaaagaaacggtggaggagcaggccagcacg
acagagcgggttttccaggaccgtcagtatcagattgatgctgccatcgtgaggattatg
aaaatgagaaaaacactgagccataatctgttgatgtcggaggtttacaaccaactcaag
ttccccgtgaagcctgcagatctgaagaagaggatagagtctctaatcgacagagattac
atggagagagacaaagaaaactctaaccagtacaactacgtggcctaa

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