Cynoglossus semilaevis (tongue sole): 103390778
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Entry
103390778 CDS
T04866
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03020
RNA polymerase
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103390778 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
103390778 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103390778 (polr2b)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103390778 (polr2b)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103390778 (polr2b)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103390778 (polr2b)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103390778 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103390778
NCBI-ProteinID:
XP_008325012
UniProt:
A0A3P8V592
LinkDB
All DBs
Position
15:8335011..8341916
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDDLDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLAEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLIRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcaggacgaagataatcagtatgatgaagacgaagatgaaatcactccagat
ctttggcaggaagcttgttggatcgtcatcagctcatattttgatgagaaaggtctggtg
cgacagcagctggactcatttgatgagtttattcagatgtcagttcagaggattgtggaa
gatgctccacccattgacttgcaggcagaagcacaacacacatcaggggaggtggaggaa
ccgccccgttaccttttgaagtttgagcagatttacctgtcaaagccaacacactgggaa
agagatggagccccatctccgatgatgcccaatgaagcccgactacgaaacctcacttac
tctgcaccactttatgttgacatcaccaaaacaataataaaggaaggcgaagaccagctg
cagacgcagcaccagaaaactttcattggaaaaattccaatcatgcttcgttccacgtac
tgcctactgagtggcctgactgacagagacttatgtgagcttaacgagtgtccgctggac
cccggaggttattttattatcaacggctctgagaaggtgcttattgcccaagaaaagatg
gcaacaaatacagtttatgtctttgccaaaaaagactcaaagtatgcgtacacggcagaa
tgtcggtcctgtttggagaattcatctcgacccaccagcactatttgggtcagcatgatg
gccagaggaggacagggagtgaagaagagcgcaatcggccagaggattgtttccacgctg
ccgtacatcagacaggaagtccccatcatcattgtgtttcgggcacttggctttgtctca
gacagagacattctggaacacatcatctatgatttcgatgaccctgagatgatggagatg
gttaaaccatctcttgacgaagcgtttgtgattcaggagcagaacgtagcattaaacttt
atcggttccaggggagcaaaacctggagttacaaaggagagacgtataaaatacgccaaa
gaggttttgcagaaagaaatgctgccacatgtcggagtcagtgacttctgtgaaactaag
aaggcatatttcttaggctacatggtccaccgcttgcttctagctgcactcggtagacga
gaactggacgacagagatcactatggaaacaagaggctggacctcgccggaccactgttg
gctttccttttcaggggcatgttcaagaacctgctgaaggagatcagaatctacgctcag
aagttcattgacagagggaaagactttaacctggaactcgccatcaaaaccagaatcatc
tctgatggactcaaatactccctcgccaccgggaactggggtgacgtaaagaaggctcac
caggcccgagcaggagtgtcacaggtgttgaaccgtctgacgtttgcgtccactttatct
cacctgcgtcgagtcaactctcctatcggcagagatggaaaacttgcaaagcctcgacag
ttgcacaacaccctgtggggaatggtgtgtccagccgagacacccgagggtcacgccgta
ggtctggtgaagaatttggcgctcatggcctacatctctgtaggttctcagccttcaccc
atcctcgagttcttggaagagtggagtatggagaacctggaggagatctcaccagctgcc
atcgcagatgcaacaaagatttttgtgaatggttgctgggtcggaatccacaaagatccc
gagcagctgatgaacacactgcgtaaactaaggcgacagatggacatcatcgtctctgag
gtgtcaatgattcgagacatcagagaacgtgagatcagaatttatacggacgcaggacga
atctgtcggcctctgctgattgttgagaaacagaagttgctgctgaagagaagacacatc
gaccagctaaaggaacgggagtacaacaactacagctggcaggacctggtagcgagtgga
gtggttgagtacattgatactttggaggaggagacggtgatgcttgccatgacccctgat
gacctccaggagaagggtgtggcctactgttccacatacactcactgtgagattcatcca
tctatgatcctaggagtgtgtgcttccatcattcccttccctgaccataaccagtctccc
aggaatacgtaccagtctgctatgggtaaacaggccatgggcgtttacatcaccaacttc
catgttcgaatggacacactggctcacgtcttgtactacccccagaaaccactggtcact
acccgatccatggagtaccttcgctttagagagctgcctgcaggcatcaactccattgtg
gcgattgcatcgtacactggatacaaccaggaggactctgtgatcatgaacaggtcggct
gtggatcgaggtttcttcagatcggttttctatcggtcctacaaagagcaggagtcaaag
aaaggctttgatcaggaggagatctttgagaagccaacacgtgaaacctgtcaggggatg
agacacgccatatatgacaaactggatgatgacggactgattgcacctggagtccgtgtg
tcaggcgaggacgtgatcataggtaagactgtgacgctgcctgagaacgacgacgacctc
gacagcactaaccggcgctacaccaagagggactgcagtactttcctcagaactagtgaa
actggcatcgtggaccaagtgatggtgacgctaaatcaggagggctacaaattctgcaag
atcagagttcgttctgttcgaattcctcaaattggagacaagttcgccagtcgacacgga
cagaaaggaacctgtgggattcagtacagacaggaggacatgcctttcacttgcgaggga
attacaccagacatcatcatcaatcctcacgccatcccatccagaatgacagtcggccat
ttgatcgagtgtttgcagggcaaggtttctgcaaacaaaggtgagattggagacgccact
ccttttaatgacgctgtcaacgtgcagaaagtttctaacttgctagctgagtatggatat
cacctgagaggaaatgaggttctgtataatggcttcactgggaggaagctgacgtcacag
atcttcattggtccaacatattatcagcgtctcaagcacatggtggacgataagatccac
tcccgagccaggggtccagttcagatcctgaacagacaaccaatggaaggacgttcacgt
gatggcggtctgcgttttggtgagatggagcgtgactgtcaaattgctcacggtgctgct
cagttcctcagagagcgtctctttgaggcatcggatccttatcaagtccacgtgtgtaac
ctgtgcggactgatggccatcgccaatacgaggacacacacgtacgagtgtcgaggctgc
cgcaacaagacacagatctcgctcatccggatgccgtacgcctgtaaactcctcttccag
gaactaatgtcaatgagcatcgcccctcggatgatgacatcatag
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