Cynoglossus semilaevis (tongue sole): 103390790
Help
Entry
103390790 CDS
T04866
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem02010
ABC transporters
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103390790
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103390790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csem02000
]
103390790
Transporters [BR:
csem02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103390790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
103390790
NCBI-ProteinID:
XP_008325035
UniProt:
A0A3P8UZK0
LinkDB
All DBs
Position
15:complement(8405525..8428283)
Genome browser
AA seq
2290 aa
AA seq
DB search
MSVVFTQLLLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILISVRLNYPPYEQHECHFPNK
AMPSAGTLPWLQGILCNANNPCFRNPTPGESPGIVGNFNDSIISRLFSDAKKILLYSQND
QNLESFKELARALKALQDSRSGFKLKHVLKDDETLSSFLMKNASLPENIVQQINDGNINL
EKVFLRGFGVHLRDMCPRNGGASMVEDYVTFSDPQVTAFVQEVICRSPTAWLNLAEEHFL
SSLDFLKPIQRDVTSDPEAVRQVAIATNNLLDSLGFLAVELAGMKSWVALRNEIIFLTHN
ATSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNYNSSEDDAAAHYDNSS
TPYCNSLVQNMDSNPMSRMIWQALKPLLMGKILYTPHTSATQKIIHEMNRTFQELGVFRD
LGGMWEEMRPKVWDFMENSPQMDLVRTLLKNNITASFFHAQLSETDWTVADLSNFLSKKV
ANRRSPGSTLTWREVFNETDQAIMSISRFMECVNLDKLQPVSTEEVMVNESMILLEDRKF
WAGIVFSDITTNTTELPANISYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGG
FVYLQDVIEHGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSV
AIILKSVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAGLLVLVLKKGNLLPY
SDPGVIFLFLASYAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWEDYIG
FGTKLFATLLSPVAFGFGCEYFALFEEQGVGIQWLNLLTSTEDGGFNLRTAIIMMYFDSF
LYGLLTWYIEAVFPGQYGIPRIWYFPFTKTYWFGEKEGKSSSIPLNRTGNQRAVCIEEEP
AHLELGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYIMGRDIRTDLTAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKGEI
EQILQDTGLPHKRTARTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNHLGTGYYLTLVKK
DPEPSLSSCRNSSSNVSFSKKDGECASVSSSDAGLGSENESEAATIDNGPAATFCNIPFV
PPDVSLISSLILRHVPTARLVEDLGHEVTFVLPYHAAKDGAFVDLFKVLDVKLVDLGISS
YGVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGEPQSCLRPLTEDDRD
EGNDEDGDPESGASDWVTCTDGKGSAQVTGWSLKRHQFVALMWKRFLYARRSRKGFFAQI
VLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVSFISNDAPGDATMQSLQNALLDP
PGFGARCMVGHPIQEATCTMGDDDWLVPDVPESVQQLFSSDNWTMDDPSPACVCSCHGKK
KMLPDCPAGAGGLPPPEMKLSATDTLQNLTGRNISDYVVKTYAQIIGKSLKNKVWVNEFR
YGGFSLGARSTQVLPPANEVDDAIERVRKIFELQKGAAADRFLESLSGFINGLDTKNNVK
VWFNNKGWHSVTAFINVINNGILRANLPEGQDPEFYGIRAFNHPLNLTKEQLSQVALVTT
SVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMHFISGVQPLLYWVTNFIWDMCNYI
VPATLVILIFICFQQKSYVSSSNLPTLALLLLLYGWSITPLMYPASFFFTVPSTAYVVLT
SVNILIGINGSIATFVMELFGNNDIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADA
LERFGENRFRSPLEWDMVGKNLFAMAVEGVFFFIITVLIQYRFFFKPRPVSLLNKLGPLG
EEDEDVARERQKIVHGLGQGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNG
AGKTTTFKMLTGDTLVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHLEF
YAILRGVPENEVCQVAEWGIRKLGLIKYADKAAGSYSGGNMRKLSTAMSLIGGPPVVFLD
EPTTGMDPKARRALWDCIHSVIKEGRSVILTSHSMEECEALCTRMAIMVNGRFRCLGSVQ
HLKNRFGDGYTIILRVAGPDPDLVPVMKFIESELRGSTLKERHRNMLQYQLPSSLTSLAH
IFATLAENKEKLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNSVKRKEATVEIPLLSI
NSSAAKESGD
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgtcttcacgcagctgcttctgctgctgtggaaaaacttcacctaccgacga
cgacagacgcttcaactgctggtggagatcgtctggccactcttcatcttcttcatcctc
atctccgtgcgactcaattacccgccctacgaacaacatgagtgtcattttcccaacaag
gcaatgccttcagccggaactctaccgtggcttcagggaatcctctgcaacgccaacaat
ccctgcttcagaaacccaacacctggagagtctccgggaatcgttggcaactttaatgac
tcgataatatctcgtcttttttctgatgccaaaaagattttgctctacagccaaaatgac
cagaacctggaaagcttcaaggagcttgcacgggccctcaaggccctacaggacagtcgc
tcaggcttcaaactgaaacacgttctcaaagatgatgaaactctgtctagtttcttgatg
aaaaacgcatcattgcctgaaaacatcgtgcaacagataaatgatggaaacatcaaccta
gagaaggtcttcctccgtggatttggcgtccaccttagggacatgtgtcccaggaatgga
ggagcgtccatggtagaagactacgtgacattctcggatcctcaggtgacagcgtttgta
caagaagtcatctgtcgttcgcccaccgcctggttaaacctcgctgaggaacacttcctc
agtagcctggactttctcaaacccatccaaagggatgtcacctctgatccagaggctgtg
agacaggttgccattgcgactaacaacctcctggacagtctaggtttcttggcagtggag
ttggcaggtatgaagagctgggtggccctaaggaacgagatcatcttcctgacccacaac
gccacatcatcacctagtgccatgtaccaggcagtgtctaggattgtttgtggtcaccct
gagggcggcgggctgcagatcaagtctctgaactggtacgaagacagcaactacaaagca
ctttttggaaactacaacagcagtgaggacgatgctgccgctcactacgacaattcttcc
acaccatactgcaacagtcttgtccaaaatatggactctaacccaatgtccagaatgatc
tggcaagcactgaagccactgctcatgggaaaaattttgtacacaccccatacgtcagcc
acacaaaaaatcatccatgaaatgaaccggaccttccaggagctgggtgtgttcagggat
cttggaggaatgtgggaagagatgagaccgaaagtgtgggacttcatggagaacagtcca
cagatggaccttgtcaggaccctactgaagaacaacatcaccgccagcttcttccacgct
cagctgtctgaaacagactggactgttgcagatttgtccaacttcctgtcgaagaaggtg
gctaaccgacgatcgcccggcagcactctcacatggagggaggtttttaacgagactgac
caggccatcatgagcatctcccgcttcatggagtgtgtgaacctggacaaactccagcca
gtctctactgaggaggttatggtgaacgagtccatgatattgttggaggacaggaagttc
tgggcaggaatcgtgttttcagacatcaccaccaacaccaccgaactaccagccaacatc
agctacaaaatccgcatggacattgacaatgtggagaggaccaataaaattaaagacgcg
tactgggacccaggtcctcgggccgatccattcgaagacatgaggtacatctggggtggg
tttgtgtacctgcaggacgtcattgagcatggcatcatcagagccgtgacagggaccaag
gagaagactggtgtctacatccagcagatgccatatccatgctatgtagatgacatcttc
ttgcgtgtgatgagccgctccatgccgctcttcatgactctggcatggatgtactcggtc
gccatcatcctaaagagtgttgtgtatgaaaaggaggcacggcttaaagagactatgagg
atcatgggtttggacaacgggattttgtggctcagctggttcatcagcagcctgattcct
ctgctgattagtgctgggctgttggtgctggtgctcaagaaaggaaacctgctgccctac
agtgaccctggtgtaatcttcctcttccttgcgtcctacgctgtagtgactatcatgcag
tgtttcctcctgagcacagcatttgcacgagcgaacctggcagcagcatgtggaggcatc
atttactttacactctacctgccctatgtgctgtgcgtcgcctgggaggattacattggc
ttcggcaccaaacttttcgctactctcctgtctccagtggcttttgggtttggctgtgag
tactttgccctgtttgaggagcagggcgtcgggatccagtggctgaaccttctgacttcc
acagaagacggtggctttaacctccgcactgccatcatcatgatgtactttgactccttt
ctgtatggtctcctcacctggtacattgaggccgtgtttccaggtcagtatggaatccct
cgaatttggtatttcccattcaccaagacctattggtttggagaaaaggaagggaagtcc
agcagcattccactcaaccggactggaaaccaaagagctgtgtgtatagaggaggagcca
gctcacctggagctcggtgtttacattgagaacttggtaaaggtttaccgccatgggaaa
aagcttgcagtggatggactgacactgggcttctacgaggggcagatcacgtccttcctg
gggcacaatggagcaggaaaaacaaccacgatgtcaatcctcactggtctgttccccccc
acctccggcactgcctacatcatgggcagagacatccgtacagacctgacagcgattcga
cagagtcttggagtctgtccgcaacataatgttcttttcagcatgctgacagtggaggag
cacatctggttttatgcacgtctcaaaggtttgtcagaggagcaggtgaaaggagagatt
gaacagattctacaggacactggactgccacataaacgcacagcccggaccagcactctg
tccgggggcatgcagaggaagctgtctgtggccctggcttttgttggtgggtcaaaggtt
gtgattcttgatgagccaacagctggtgttgacccctatgcacgtagaggaatatgggat
ctgctgctgaaatatcgacaggggcgcactatcatcttgtccactcaccacatggacgag
gcggacatccttggtgacaggattgcaatcatttcccacggaaagctttgctgtgtgggt
tcttccttgtacctgaagaaccatttagggacaggttattatctgacactggtcaagaaa
gatccagaaccatcgctgagctcctgtagaaactcttccagcaatgtatccttcagcaaa
aaggacggggaatgtgcatcagtgagcagcagtgacgccggcttaggaagtgaaaatgaa
agtgaggcagcaaccatcgataatggacctgctgcgaccttctgtaacatcccttttgtt
ccaccggatgtgtcccttatctcaagtctaatcttgcgccatgtgcccactgcccgcttg
gttgaggacctgggccatgaggtgactttcgtactaccataccacgctgctaaagatggc
gcctttgtggatctgttcaaagttctggatgtgaaacttgtggacctcggcatctccagc
tatggtgtgtcagacaccacactggaggagattttcctaaaggtggcagaagataacgga
gtggacactgaagtaccctcagatggaacacttcctgttcgccgtcggaggcggactcac
gcatttggaggaggtgaacctcagagttgcctgagaccattaacggaagatgaccgcgat
gagggaaacgatgaggatggtgatcctgagagtggagcatctgattgggtgacgtgcaca
gatggtaaaggctcagctcaggtgacagggtggagtctgaagaggcatcaatttgtggct
ctgatgtggaaacgtttcctgtacgcgcgtcgctccagaaagggcttctttgcacagatt
gttctcccggctgtgtttgtctgcatcgctcttgtcttcagtcttattgtcccaccattt
ggaaagtatcccagcctagagctacagccatggatgtacgaagaccaagtctccttcatc
agcaacgacgctcccggtgacgctacaatgcagagtttacaaaacgcccttcttgaccca
ccaggctttggagcacgctgcatggttggacatccaatccaggaggcaacatgtacaatg
ggtgatgatgactggctcgttcctgatgtccccgagagtgttcagcagctgtttagctcc
gataactggaccatggacgacccatcacctgcctgtgtctgcagctgtcatggcaagaaa
aagatgctcccagattgtcccgctggggctggaggactacctccacctgagatgaagctc
agtgccacggacaccctgcagaacctgacaggaagaaacatctcagactacgtggtcaag
acatatgcacagattattggaaagagcttgaagaacaaggtctgggtgaatgagttcagg
tatggcggtttctcattgggtgcgaggagcactcaggtcctcccaccagccaatgaagtc
gatgatgccattgaacgagtcaggaagatctttgagttacagaagggggcagcagcagat
cggttcctggagagtttgtctggtttcatcaatggtttggacacaaagaacaatgtgaag
gtctggttcaataataaaggctggcacagtgtcacagccttcattaacgtcataaacaat
ggaattctccgtgctaacctgcctgaaggtcaggaccctgaattttatggcatcagagcg
tttaaccaccccctgaatctgaccaaggagcagctgtcacaggtggcgctagtgacaacc
tcagtggacgtgctggtgtccatctgcgtgatctttgccatgtctttcgtcccggccagt
tttgtggtctttctcattcaggagcgtgtttccaaagccaaacacatgcacttcatcagt
ggtgtgcagccactgctctactgggtcaccaacttcatctgggacatgtgtaactacatt
gtgcctgcaacactggtcatcctcatctttatctgctttcaacaaaaatcctacgtttca
tcaagtaacctgccgacacttgctctgctgctgctgctctatggctggtcgatcacgccc
ctcatgtaccccgcttctttcttcttcaccgtacccagcacagcatatgttgttctaacc
agcgttaacatcctgatcggcattaacggcagcatcgccacctttgtcatggagttgttt
ggaaacaatgatattggaggaattaacgacatcctgaagaacgtcctgctcatctttcca
cacttttgcttgggaagaggcttgattgacatggtgaagaaccaggccatggcagatgcc
ctcgaaagatttggtgagaacaggttccggtctcctctggagtgggacatggtcggtaaa
aacttgttcgccatggcagtggaaggcgtcttcttcttcatcatcactgtcctcattcag
tacagattcttcttcaagcccagaccggtcagtttattgaataagctcggtccacttgga
gaggaagacgaggatgtggcacgagagagacagaagatcgtccacggtctgggacaagga
gacatcctggagctgcgtcagctcaccaaggtgtttaaaaggaaacagaagccagctgta
gatcgactgtgtgttgggattccacccggagagtgctttggccttctaggtgtgaatgga
gctggaaagacaacaacctttaagatgctgactggagacacactggtgacgagcggagag
gccttcttagctggaaaaagcattctgagggaaatagatgaggttcatcagaacatgggc
tactgcccacagtttgatgccatcaatgaattgctgacaggaagagaacacctggaattc
tacgccatcctgagaggagtaccagagaatgaagtttgccaggtggcagaatggggaata
agaaagttgggtctcatcaaatatgctgacaaagcagcaggaagttacagtggtggaaac
atgaggaagctgtcgactgccatgtctctgattggagggccacctgttgtcttcctggac
gagcccaccacaggcatggaccccaaagctcgtcgtgctctctgggactgcattcacagt
gtcatcaaggaaggacgctcagttatcttaacatcccacagtatggaagagtgtgaagcc
ctgtgcaccaggatggccatcatggtgaacggcaggttccgatgtttgggcagtgtccaa
catttgaaaaacaggttcggtgatggttacaccatcatcttgagagtggcagggcctgac
cctgacttagtgcctgtcatgaagttcatagaaagcgagctgcgtggcagcacactgaag
gaacgtcatcgaaacatgttgcagtaccagctgccctcatcgctcacctcactcgcacac
atctttgccaccctggccgagaacaaagagaagctgcgcatcgaggactactcagttacg
caaaccacgctcgaccaggtgttcgtaaactttgcgaaggaccagagcgacgattatcac
tccaaagacaattctgtgaaacgaaaagaagcaactgtcgaaatcccgctgctgagcatt
aactccagtgctgcaaaagagagcggagactga
DBGET
integrated database retrieval system
