Cynoglossus semilaevis (tongue sole): 103390832
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Entry
103390832 CDS
T04866
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem02010
ABC transporters
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103390832
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103390832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csem02000
]
103390832
Transporters [BR:
csem02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103390832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
103390832
NCBI-ProteinID:
XP_008325095
LinkDB
All DBs
Position
1:complement(29313302..29467703)
Genome browser
AA seq
2230 aa
AA seq
DB search
MGLWTQFTLLLWKNFSLRKRQKVRLVVEVIWPLVLFFILMAVRSTIQPIHKGQCHYPNKA
MPSAGVLPWIQGMMCNIQNPCWNYSTPGETPGQVNNFNNSIISRVLLELQALLQNRSVVS
KAQTLADAVEGWNSMLLQFNSINVQPVTLRSILRQDETFSTYLKEDLSVPETVVDSLMNA
TVNITQVRGVQRPGGLRTVLCEGTNLDEYVQFSSPAERETFQNISCSLTEQQLIYTQQML
LQNLDVRKVLSGVTGQNNADTMIQFNDVAQSAFPLMQELVRLQASAVFQEARELNFQQDM
IGSFNMLLCGEQPDFSSNVMTLISRSSTQMSGFQSIFITGNTSDDFCQNFIDTLENTPGL
RNIWATFKPLVLGKILYTPDTPVSRLIVSKANSTLDALAKLKELADMWVELGPRVYDFFQ
NGTQVNTIRALLANPVFATVLDQRLEGTGWTAELIANFLYNGPPEDRPPGMPTYDWRDVY
QATDRILTFLSKFLSCLDLNKFQAVSTEHLLVIKALDLVNNDSHWASVVFENLQPNSSVP
PVHIKYKIRMDTNDVEHSDDIEHRSWSPGARDNAYSDLKYVMGGFVYLQDMMDHGIIQVQ
TSKTQPLGVFAQQMPYPCYVNDSFTEQIATMISLIVVLAFIYTVSMTIKDLVLEKELRLK
DVLRAVGVHNSSLWLARLTENIVLLTVPCLLISVLLKYGKLLRYSDPSLVFVFLLVYCVV
TISQCFLISVFFSKANLAAACGGLIYFVLYLPHVFFNAWRDVLGFPVKVAVSVLSCVSFG
FGCESFTKYEEQGIGIQWHNMHKSPEDGERFTFLLSIIMMLFDAVLYWTLTWYIENVFPG
EYGIPKPWYFPFTSLYWCGPTKKTSDDPDLLKDTGGQGYLEKPPPNMRAGVSVRNLVKIY
KTGNKLAVDGLTVDFYENQITSFLGHNGAGKTTTMSILTGLFTPTSGTALINGYDIHTDM
DSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRKEVEMEMEQMIIDVGLPHKRKDL
AKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTH
HMDEADILGDRIAIISHGRMRCCGSSLFLKKCFGSGYYLTLVRDGTEKMAAQRHGMIQSQ
AAEEKDLSGKNSPDDGIGSQTLNFMDPSALGQLVRRHVPAAVFLESIGQEITYVLPYSAA
RDGTFALLFQELDESIADLGLTSYGISDTSLEEIFLKVAEETGVDVEIQTTEKRALRDHK
RNSQKAKRNSISSVCASRAVSESHEKLTNKVQDVVRNTSVGGRGSTVITGKELIRRQFLA
LFIKRFHHARRSRKGIIGQMILPPVFVCLSLIFTLIIPSVSDYPSLELQPWMYGLPQNTF
FSNDMPNDTEVSQVVESLVNSPGFGTRCMEGDPILNLPCSSRGTDWFTPPVDQTVMDIFL
NGNWTMANPSPSCQCSTPQLVTMLPRCPPGAGGLPPPQRIQNTTDTLQDLSGRNMTDFLI
KTFEKSGKFRYGGLSVGEVNSQVRMTEEDIEAAFVDLKELLGSSENNVTDRLLQTSEELL
KKLGTKNNVKVWFYNQAYHSLVSFLGVANNAILRGNLPAGENPRQFGISVSNHPLNLTKE
QLALAVTVRSSTDVVVSICIIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWLA
NFAWDMCNYILASLIVVLIFIAFQKKAYVSAANLPALILLLLLYGWSITPMMYPASFVFS
VPSTAYVVLTCINLFIGINGSMATFFMELLDDEEVTHVNDIMKQVLLIFPHFCLGRGLID
MATNQVTADLFSNFGEDRFKDPLSWNMVGRNLCSMSILGAVMFAVTILIQYKFFCKPRLI
SGKSLSAEEEDIDVARERDRVYSGKAQSDLLRIYDLTKVYPRKKTPAVDRICVGVPAAEC
FGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQSLGYCPQFDAIDNLL
TGREHLQFYARLRGVPEHEVAMVAEWGIQKLGLIKYSNKCAGTYSGGNKRKLSTAIALMG
CPPVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCTRMAIMVNGA
FKCLGSIQHLKNRFGDGYTVTVRVGGSPPALKPVEDFVEQTFAGSVLKEKHHNTLQYQLP
YTPGALANIFSQFISHQQTLGVEDYSVSQTTLDQVFVNFARHQQGEEESQSYENPVDTSD
EEPKTINTVF
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctggacgcaattcactctgctcctgtggaagaacttcagtctgcggaagaga
cagaaggtccgactggtggttgaggtgatatggcctctggtcctcttcttcattctgatg
gcggtgcgctccaccatccagccaattcataaaggccaatgtcattacccgaataaagca
atgccatcggctggcgtgcttccctggattcagggtatgatgtgcaacatccagaatccc
tgctggaactactcgacaccgggggagacaccaggacaagtcaacaacttcaataactcc
ataatttccagagtgttgctggagcttcaggccctcctgcagaacaggtctgttgtcagt
aaagcacagacgttggcggacgctgtggaagggtggaactcgatgctgctccagtttaat
tccattaatgttcaaccagtcaccctgaggagcattttgagacaggatgaaaccttttcc
acgtacctgaaagaggacttgtcagtgccagaaactgttgttgacagcctcatgaacgct
accgtgaacatcactcaggtgagaggcgttcaaaggccaggtggcttgaggacagtgctg
tgcgaggggacaaacttggacgagtacgtccaattcagcagccctgctgaaagagagacc
ttccagaacatcagctgctcgctcactgaacagcagctgatttacacccagcaaatgcta
ctgcagaacctggatgtcaggaaagtgctgtccggggtgacaggtcagaacaacgcagac
accatgatacagttcaatgatgtggctcagtctgcttttcctttgatgcaggagctggtc
aggttacaggcctccgcagtctttcaggaagcgagggaattgaatttccagcaggacatg
attggcagtttcaatatgctactgtgtggagagcagcctgacttcagttccaacgtcatg
accctgatttcacgctcatctacacaaatgagtggcttccagtcaatcttcatcacaggc
aacacttccgatgatttctgtcagaatttcattgacaccttggaaaacacacctggtctg
cgcaacatttgggccaccttcaagccactggtgctgggaaaaatcctctacacaccagat
acacctgtcagccgcctcatcgtgagcaaagcaaatagcacattggacgccttggccaag
ttaaaagagctggctgacatgtgggtggaacttgggccacgtgtctacgatttctttcag
aatggcactcaagtcaacacaatacgggctttgttggccaaccctgtctttgcaaccgtc
ttggaccagcgtctcgaaggcacaggatggacagccgagctgatagccaacttcctgtac
aacgggcctcctgaagatcgacctcctggcatgcctacatatgactggcgtgatgtttat
caggcaactgatcggatactgacatttctgtctaagttcctcagttgtttggacctgaac
aagttccaggccgtctccaccgaacacctcctggtgattaaggcactggatctcgtaaac
aatgactcccactgggccagtgtggtctttgaaaacttgcagccaaattccagcgtccca
cctgtgcatatcaaatacaaaatccgcatggataccaatgatgtggagcattcagacgat
atagaacacaggtcatggtcccccggggctagagacaacgcctacagcgacctcaaatat
gtcatgggaggctttgtctacctgcaggacatgatggaccatggcatcatccaagtgcag
acatcaaagacccagcccctcggtgtgttcgcccaacagatgccatacccatgctacgtg
aacgacagcttcactgaacaaatcgctaccatgatatctttgatagtcgtgctggccttt
atatacaccgtgagcatgaccatcaaagacctggtgcttgagaaggagctcaggctgaag
gatgtgctgcgtgctgtgggcgttcataacagttccctgtggttggccaggttgacagag
aacattgttttgctcacagttccctgtttgctcatcagtgtcttgctgaagtatggtaaa
ctgctgcggtacagcgacccctcgttggtctttgtcttcctgctggtgtactgtgtggtc
accatcagtcagtgcttcctcattagcgtcttcttctctaaggccaacttagcggcggcg
tgcggtggcctcatctactttgtcctctatctgccgcatgtcttcttcaacgcctggagg
gacgtcctaggtttcccggtcaaggttgctgtgagtgtgctgtcttgtgtgtcctttggc
ttcggctgtgagagtttcactaagtacgaggagcaaggcatcggcattcagtggcacaac
atgcacaagagtcctgaagatggagagcgtttcacgttcctcctgtccatcattatgatg
ctttttgatgcagttttatactggacattgacttggtacattgagaatgtatttccagga
gaatatgggattccaaaaccatggtatttcccctttacttcattgtattggtgtggaccc
accaaaaaaacctcagatgaccccgacctgctgaaggatacgggaggacaaggatacctg
gagaaaccaccacccaatatgagggcgggggtctccgtccggaacctcgtcaagatctac
aagactgggaacaagctggctgtagatggcctgaccgttgacttttacgagaaccagatc
acatccttcctcggccacaatggtgctggaaagacaaccaccatgtcaattctgacagga
ctcttcacccctacctcaggcaccgcgctcatcaatggatatgacatccacactgacatg
gacagcatccggaagtatttgggaatgtgcccgcagcacaatgttttattcaatgagctg
acggtggaggagcacatctacttctacgcccggctgaaggggctcagccgtaaggaagtg
gaaatggagatggagcagatgataatagacgtcggtttgccacacaaacggaaggatctg
gctaagaacctgtcaggtggtatgcagaggaagctgtctgtggccatagcatttgttgga
ggctcgaaaatcgttatcttggatgaacccacagcaggtgtcgacccatacgcccgcagg
ggtatctgggagctgttgttgaagtacaaacaaggtcgcaccatcatcttgtcaacgcac
cacatggacgaagcagacatcctgggagaccgcatcgccatcatctcccacggcagaatg
cgctgctgcggctcctcacttttcctcaaaaaatgtttcggcagtggttactacctcact
ctggttcgagatgggacggaaaagatggcagctcagcgccatggtatgatccaaagtcaa
gccgctgaggagaaggatctttctggaaagaacagcccagatgacggcattggcagtcaa
accttgaacttcatggatccctcagctttgggtcagctggtgcgccgccatgtacccgct
gcagtcttcttggagagcatcggtcaggagatcacctacgtcctgccctacagcgctgcc
agagacgggacctttgctcttcttttccaagagctggacgagtccattgccgacctcggt
ctgaccagctacggcatctctgacacttcactggaggagatattccttaaagttgctgaa
gagacaggagtggacgtggaaattcaaacaacagagaagagggccctgagagaccacaaa
agaaactcccagaaagcgaagcggaacagtatctccagcgtctgtgcgtcacgagctgtg
tcagaatctcatgaaaaactcacaaataaagtccaagacgtggtgaggaacaccagtgtc
ggggggaggggatccacagtcatcacaggaaaagagctaatcaggaggcagttcctcgca
ctcttcatcaaacgcttccaccacgcccgcaggagccgcaagggaatcatcggccagatg
atcctgccacccgttttcgtttgcctgtccttgatcttcacgctcatcatcccatctgtg
tctgattatcccagtctggaactgcagccctggatgtatggtctgcctcaaaacaccttt
ttcagcaatgacatgccaaacgacacggaggtgtcccaggtggtggaatctttggtgaac
agtcccggctttggaacccgctgcatggaaggagacccgatactgaatttaccttgttcc
tcccgtggtaccgactggtttactccgcccgtggatcagactgtgatggacatctttctc
aacggaaactggaccatggccaacccctccccctcctgccagtgcagcactccccagctg
gttaccatgttaccgcgctgtccgcccggtgcaggaggtctccctccacctcagaggatc
cagaacaccactgacacgctgcaggatctatctggacggaacatgaccgacttcttgatc
aagacttttgaaaaaagtggcaaatttaggtacggaggtttgtctgtgggagaagtcaat
tctcaagtccgtatgactgaagaagacatcgaggcagcgtttgtggatctgaaggagctc
ctgggatcatctgagaataatgtcactgatcggctgctacagacgtccgaggagctgctg
aagaagctgggcaccaagaacaatgttaaggtgtggttctacaaccaggcgtatcacagc
ttggtgtctttcctcggcgtggccaacaatgccatcttgaggggaaacttgccagcggga
gagaatccccgccagttcggcatctctgtgtccaatcaccctctcaaccttaccaaggag
cagctcgcgttggccgtcacggtcaggtcgtccacagatgtggtggtgtccatctgcatt
atcttcgccatgtccttcatccccgccagctttgtcctcttcctcatccaggagcgggtg
agcaaagccaagcacctgcaattcgtcagcggcgtcaaccccactgtatactggctggcc
aattttgcatgggacatgtgtaactacatcttggcctctttgattgtggtcctgatcttc
atcgccttccaaaaaaaggcctatgtttctgctgccaacctgcctgctctgattttgctg
ctgctcttgtacgggtggtccatcacccccatgatgtatcccgcctcctttgtcttcagc
gtgcccagcactgcctacgtggtgctcacctgcatcaacctgttcataggcattaacggc
agcatggccacctttttcatggagcttttagatgacgaggaagtcactcacgtcaatgac
atcatgaagcaagtgctgctgattttcccacacttctgtcttggccgaggcctcatcgac
atggccacgaaccaggtgacggccgacctcttcagcaattttggcgaagaccgctttaag
gatcctctcagttggaacatggtgggaaggaatctctgctccatgtccattcttggagca
gttatgtttgctgtgacaatcctcatccagtacaagttcttctgcaaaccaaggctcatt
tcggggaagtcattatctgcggaggaggaggatatcgatgttgctcgggaacgtgatcga
gtgtacagtggaaaagcccagagcgaccttctgcgaatctatgacctcactaaggtgtac
cctcggaagaaaacccctgctgtggacaggatatgtgtgggtgtacctgcagcagagtgt
tttggcttgctgggaatcaatggggctgggaaaaccaccaccttcaagatgctgacagga
gatatcccagtctctggtggagaggctttcctaaacggatacagcatacggactgaaatg
agggacgtgcaccagagtttgggctactgtccacagtttgatgccattgataacctgctc
acggggcgggaacatctgcagttttacgccaggttacgaggagtaccagaacacgaggtc
gccatggtggcagagtggggtatccagaagttgggcctgatcaagtattccaacaagtgt
gcaggaacctacagcggcgggaacaaacgaaaactttccacagcgatcgccttgatgggt
tgccctccagtcatctttctggatgagccgacgacagggatggatcccaaagcccgacgc
ttcctgtgggactgcatcctcagcatcatcaaggagggacgctctgtcattctcacttca
catagcatggaggaatgtgaggcgctgtgcacccgcatggccatcatggtgaatggtgcc
ttcaagtgtctgggcagcatccaacatctgaagaacaggttcggcgatggctacacggtg
acggtgcgtgtgggtggctctcctcctgccctaaagccggtggaggactttgtggagcag
acgttcgcaggaagtgtcctgaaggaaaagcatcacaacacactgcagtatcagctgcca
tacacaccgggggctctggcaaacatcttcagccagttcatcagccaccaacagacgctc
ggtgtggaggattactctgtgtctcagaccactctggaccaggtctttgtgaattttgca
aggcaccagcaaggggaagaggagtcccagagctatgaaaacccagtggacacttcagat
gaggagcctaagacgataaacaccgtgttttag
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integrated database retrieval system
