Cynoglossus semilaevis (tongue sole): 103391063
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Entry
103391063 CDS
T04866
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03015
mRNA surveillance pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103391063 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
103391063 (ncbp1)
03015 mRNA surveillance pathway
103391063 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103391063 (ncbp1)
03041 Spliceosome [BR:
csem03041
]
103391063 (ncbp1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103391063 (ncbp1)
Spliceosome [BR:
csem03041
]
Common components
Common spliceosomal components
Cap binding complex
103391063 (ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AAA_13
Vfa1
DUF1664
AAA_11
C24B10_03
FapA
DUF1690
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
103391063
NCBI-ProteinID:
XP_008325408
UniProt:
A0A3P8VYN6
LinkDB
All DBs
Position
15
Genome browser
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVQMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPTPPHIDVLYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWADCLTVDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSVLIPAE
PIFIYKYLDETASTLPGYQLSITLGNAIKNRATNEEILTILKEVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEILKTLADSDEGKLHTLKVIYEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLYIWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQLKRRDSGDDEDMDKNSEDEDGQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCETGSVDISTPWYKNCVDRLQQIFLMHHVTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaggcgacacagcgacgagaatgacggaggccaggcccataaaagaagaaga
acatcagagcccattgagattgaagaccgtctggagtctctgatatgtcgtgtcggggag
aagagtacatcatccctggagagcaacctagagggccttgcaggtgtcttggaggctgat
cttccaaattacaaaaacaaaattttgcgcatattatgtgctgttgcccgtctcctcccc
gagaaactgaccgtctacacaacgttagtcggtcttctcaatgccagaaactacaacttt
ggaggcgagtttgtggaggccatgattaggcagctcaaggagacgttgaagaacaacttg
tacaatgaagctgtttacttggtgcgtttcctttctgacctggtcaactgtcacgtgatc
gctgctccttctatggtggctatgtttgaaaactttgtcagtgttactcaagaagaagac
gtacctcaggttcggtcagactggtttgtgtatgtggttctgtcctgtctgccctgggtg
ggcaaagagttgtatgaaaagaaggatgttgagatggaccgactcctcagccagattgaa
ggctacctcaagaggagagtaaaaactcatgtccaaatgctccaggtgtggactgcagag
aagccacacccccaggaagaatacctagattgtctttgggctcagatccagaagctaaag
aaagaccgctggcaggagcgtcacatccttcgtccatacatcgccttcgacagcgtcctg
tgtgaagccctgcagcacaatctgccaccctttactccacctggccacatgccggacgcc
cagtacccaatgccccgagtcgtgttccgcatgtttgactacaccgatgccccagagggt
ccagttatgcctggcagccactcagtggagaggtttgtcattgaagagaacctgcactgt
atcatcaagacccactggaaagaaagaaaaacatgtgctgcacagttactcagttatcct
gggaaaaataagattccactcaactatcacatcgtggaggtgatttttggagaacttttc
cagctgccaacccctccgcacattgacgtcttgtacacgacactgcttattgaactctgc
aaactgcagccaggctctttgcctcaagttttggctcaagctacagagatgctttacatg
agactggacactatgaacacgacctgcattgacagacttattaactggttttctcaccat
ttgagcaacttccaattcagatggagctgggatgactgggctgactgcttaacagtggat
ctagagaaacccaagcccaagtttgtgaaggaagttctggaaaagagtatgagactttcc
taccatcagaggatcgtggacattgtccctccgaccttctcggtgctcattcctgccgaa
cccatctttatctataaatacctagatgagactgcatcaacattaccaggttatcaatta
tccatcactttgggaaatgccatcaagaaccgagcgacaaacgaggagattctaaccatc
cttaaagaagttcccaaccccaaccaggaggatgatgatgatgaaggcgaaagcttcaac
cctctgaagatcgacgtcttcctccagactctccttcaccttgccgccaaatccttcagc
cactcctttagtgccctggccaagtttcatgagattttaaagacattggccgacagtgac
gaggggaagcttcacacgcttaaagtgatttatgaagtgtggaggaatcacccgcagatg
attgctgtgttggtggacaaaatgattcgaacacagatcgtggactgcgccgccgtcgcc
aactggctcttctctcaggacatggcgcatgagttcaccagactgtacatctgggagatt
ctacactcgaccatcagaaagatgaacaaacatgtccagaagatccagaaggagctggag
gaggcgaaggacaagctggagaaacagcaacttaagaggagggacagtggcgatgacgag
gacatggacaagaacagcgaggacgaggatggtcagcttgaggagcaaatcgagaggctc
caggagaaggtggagtctgcccagagtgaacagaagaatcttttccttgtcattttccag
cgcttcattatgttgttgacggagcatctggttcgctgtgagacgggcagcgtagatata
agcacaccctggtataagaattgtgtggatcgactgcagcagatcttcctcatgcaccac
gtgaccatccagcagtacatgggaactttagagaatctgctgttcaccgcagagctggac
catcacatcctggctgtgtaccaacagttctgtgctctgcagctctga
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