KEGG   Cynoglossus semilaevis (tongue sole): 103391087
Entry
103391087         CDS       T04866                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03013  Nucleocytoplasmic transport
csem03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103391087 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103391087 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103391087 (thoc3)
   03041 Spliceosome [BR:csem03041]
    103391087 (thoc3)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103391087 (thoc3)
Spliceosome [BR:csem03041]
 Complex C
  Other components
   EJC/TREX
    103391087 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103391087 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML RMC1_N WD40_RFWD3 DSE1_N eIF2A Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Tricorn_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th PAC11 PD40 TRM82_WD Beta-prop_ACSF4 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_SPT8 ASA1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR41 Peptidase_S9_N Beta-prop_NWD2_C Beta-prop_Nup120_160 TP_0598_N Cytochrom_D1 Beta-prop_WDR11_1st DPPIV_N Beta-prop_ELP1_1st WD_LRWD1
Other DBs
NCBI-GeneID: 103391087
NCBI-ProteinID: XP_008325442
UniProt: A0A3P8W6E1
LinkDB
Position
15
AA seq 322 aa
MASQYYQQMQESFQNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFILEKDRL
VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFAIGSADALVSLWNLEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACDDK
DGKYDNNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtattaccagcagatgcaggagagctttcagaataacaacaagagccgc
gaattccccgctcactccgccaaagtccactcggtggcctggagctgcgacggccgcaga
cttgcttctggttcttttgacaaaacagccagtgttttcattctggaaaaggaccgactg
gttaaagagaacaactacagaggtcacggggacagcgtagatcaactctgttggcatccg
acaaacccagacctgttcgtcactgcatcaggagataagaccatccgcatatgggatgta
cgaaccaccaaatgtatcgcaactgtcaacacaaaaggagaaaacatcaacatctgttgg
agtccagacggtcagactatcgccgttggtaacaaagatgatgtagtcaccttcattgac
gccaagactcaccggtctaaggctgaggagcagttcaagttcgaggtgaatgagatttcc
tggaacaacgacaacgacatgttcttcctcaccaacggaaatggatgcatcaacattctg
agttacccggagctgaagcccattcagtccattaacgctcacccatcaaactgcatctgt
atcaagtttgaccccacaggaaagtactttgctataggaagcgcagacgcactggtcagt
ctgtggaacttagaggagctggtgtgtgtccgctgtttctctagactagactggccagta
aggactctaagctttagtcatgatgggaagatgttggcttcagcctctgaggatcatttc
attgacattgctgaagtggagacaggagaaaaactttgggaggtccaatgcgactctcct
accttcactgttgcttggcacccaaagaggccgctactggcctacgcctgtgatgacaaa
gatggaaaatatgacaacaaccgtgaggcgggcactgtcaaactcttcggtctccccaac
gactcctga

DBGET integrated database retrieval system