Cynoglossus semilaevis (tongue sole): 103391096
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Entry
103391096 CDS
T04866
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04010
MAPK signaling pathway
csem04210
Apoptosis
csem04218
Cellular senescence
csem04620
Toll-like receptor signaling pathway
csem04621
NOD-like receptor signaling pathway
csem04622
RIG-I-like receptor signaling pathway
csem04623
Cytosolic DNA-sensing pathway
csem04625
C-type lectin receptor signaling pathway
csem04920
Adipocytokine signaling pathway
csem05132
Salmonella infection
csem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103391096 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103391096 (nfkb1)
04218 Cellular senescence
103391096 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103391096 (nfkb1)
04621 NOD-like receptor signaling pathway
103391096 (nfkb1)
04622 RIG-I-like receptor signaling pathway
103391096 (nfkb1)
04623 Cytosolic DNA-sensing pathway
103391096 (nfkb1)
04625 C-type lectin receptor signaling pathway
103391096 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
103391096 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103391096 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
103391096 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103391096 (nfkb1)
Transcription factors [BR:
csem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
103391096 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
103391096
NCBI-ProteinID:
XP_016894878
LinkDB
All DBs
Position
15:complement(12895536..12910472)
Genome browser
AA seq
922 aa
AA seq
DB search
MAADDHYLHPNNQIFDNIMMDPSWDFTHFPTMTQTTSSLRAGDGPFLQILEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKTYPSVKICNYQGPARVVVQLVTALTPHPQLHAHSLVGK
QCDKGICVADMQPKDSTVSFPNLGIEHVTKKNVAKTLEERMIEAFRMGYNSGVAIHPEID
ALQGEVRVPRDLHDHHRSIISTAAVVQAKEMDLSVVRLMFTAFLLDSDGGYSRRLEPVVS
EPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDESGMIWEA
LGDFSPTDVHRQFAIVFKTPKYRDQNLLRPTPVFVQLKRKSDNETSEPKPFTYHPQIIDK
EEVQRKRQKTLPNFHDFSGHGAGGGLYRGGGGGPTSGGGGGPGYFQGFTTYNYGGGGGGG
GGFSTGYSAGLGGGAGGMKHVCQRDDSDDDNDDEDDDSGAGAVLGASGQTVEERMKEVGV
KTDLEPDADEELDEMTSKQLVALFQYSVTGDPAYLLTPQRPLMKAQDEDGDTGLHLAIIH
SQQEALQSLTQVVLALPGEEVLNMRNHLYQTPLHLAVITQQKEAVEALLMAGADPTLTDR
NGNTVLHLASQQEAGGMVMFLLQHQDVRRVMEQNNTAGMCAIHLAVMANQLNSLRELLES
GADVEAQERSCGRTALHLATETDNVSLAGCLLLEGNADVDCCTFNGSTPLHIAAGRGSAK
LTALLMAAGADPHKENCEPLFFKEESELFDEEEEDEGYVPGTTPLNMAATTQVLELLNGK
EYEPHTCSSVIDLPKGDLSSLDAKVKEKVCHALESEGCWEKLAHSLGLGILNTAFKLSPS
PSKTLLDSYEVSGGTVSDLLAALRLAGKCRALSILEETLQGSTVEESKTPDKDYRLLQFQ
DIKADVRIDSGVCDSGVELSTA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgaccactaccttcaccccaataaccagatatttgacaacatcatgatg
gatccctcgtgggatttcacacatttcccaaccatgactcagaccacatcgtctctaagg
gcaggagatgggccatttctacagatcctggagcagccaaagcagcggggtttcaggttc
agatatggttgtgaaggtccatctcatggcggacttcctggggcttccagtgagaagaat
aggaagacgtaccccagcgtcaagatctgtaactaccagggtccggcccgggtggtagtc
cagcttgtgacggcactgactccccaccctcagcttcacgcccacagtctggtggggaaa
cagtgtgacaaagggatctgcgtcgctgacatgcagcctaaagactccactgtcagcttt
ccaaacctgggtattgaacatgtaacaaaaaagaatgtggccaagactctggaggagaga
atgatagaggcatttaggatgggatacaactctggggtcgccattcaccctgaaatcgac
gctctgcagggggaggtccgagttccccgagacctccatgaccaccatcgtagcatcatc
agcaccgcagctgtcgttcaggccaaagagatggacctcagtgtggtccgcctcatgttc
acagcctttcttctcgacagtgatggcggttactccagacgactggaaccggtcgtgtca
gaacccatctttgacagcaaggctccaaatgcttcaaacctgaagattgtgaggatggat
cgaactgcaggctgtgtgacagggggagaggaagtttatctgctctgtgacaaagtacag
aaagatgatatccaggtacgattttatgaagaagatgagtcagggatgatctgggaggct
cttggtgatttctcacccacagatgttcatagacagtttgccattgtcttcaaaactcca
aagtatcgtgaccagaatcttctgagaccgacaccagtgtttgtccaactgaagagaaag
tcagataatgaaaccagcgaacccaaacccttcacttatcacccccagatcatagacaag
gaggaggttcagaggaaaaggcagaagacgctgccaaatttccatgactttagtggtcat
ggtgcaggaggaggtctttacagaggaggcggaggaggaccaacatcaggaggaggagga
ggaccaggttacttccagggttttactacatataattatggtggcgggggaggaggaggt
ggtggcttctccacgggatactcagcaggtctgggaggaggagcgggaggcatgaaacac
gtctgtcagcgtgatgattcagacgatgacaatgacgatgaagacgatgactctggggct
ggtgctgtgctaggagcctcaggtcagacggtggaggagaggatgaaggaggttggagtc
aaaacagatttggaaccagatgcagatgaagagttggatgagatgaccagcaaacagttg
gtcgctctgtttcagtactctgtgacaggtgacccagcatacctgctgactccacagcgc
cccctaatgaaagcacaagatgaggacggagacaccgggcttcacctggccatcatccac
agccagcaggaggcgctgcagagtctgactcaggtagtcttggctttgcctggagaggaa
gttctcaatatgagaaaccacctgtaccagactcctttacacctggcggtaatcacacag
caaaaggaagcagtagaggcgctgttgatggcgggggctgacccaaccctgacagatcgc
aacggcaacacagtgctccacctggcatcacagcaggaggcaggggggatggtcatgttc
ttactccaacaccaagatgtgaggagagtgatggagcagaacaacactgcaggcatgtgt
gctatccacctggctgtcatggccaatcagttgaattctctgcgggagctgctagagagt
ggagctgacgtggaggctcaggagcgcagctgtggtcggactgcgctccacctcgccaca
gagaccgacaatgtgtcgctggcagggtgtctgctgctagagggaaatgctgatgtggac
tgttgcacttttaatggctccacaccccttcacatcgctgcagggcgaggttctgctaaa
cttaccgcccttctcatggcagcaggtgccgacccacataaggaaaactgtgagcccttg
ttcttcaaagaggagtccgagctctttgatgaggaggaggaagatgaaggctatgtccca
ggaactactccactcaacatggcagccaccacacaggtactggaacttcttaacggaaaa
gagtacgaaccacacacatgctcaagtgtcatagatctcccaaaaggtgatttgtcaagc
ctcgatgcaaaggttaaggagaaggtgtgccatgctttggagagtgaaggatgctgggaa
aagttggctcacagtctgggtcttgggatcctcaacacagctttcaaattaagtccgtcc
ccttccaaaaccctgctggacagctacgaggtctcaggagggacagtcagtgatctacta
gctgcactgaggttagctgggaagtgcagagctctaagcattctagaggagacgttgcaa
ggctccactgtagaggaatccaaaacaccagataaagattatcggctcctccagtttcag
gacattaaggcggacgttcgcatcgatagtggtgtctgtgatagcggggttgagctttct
acagcctaa
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