Cynoglossus semilaevis (tongue sole): 103391137
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Entry
103391137 CDS
T04866
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
csem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103391137 (syvn1)
04120 Ubiquitin mediated proteolysis
103391137 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103391137 (syvn1)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103391137 (syvn1)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103391137 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-Nse
Motif
Other DBs
NCBI-GeneID:
103391137
NCBI-ProteinID:
XP_016894660
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All DBs
Position
15:complement(14169246..14180837)
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AA seq
664 aa
AA seq
DB search
MVRAALVTVTSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHIRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTVFIKYILHTVDLQSENPWDNKAVYMLYTELFTGDALSSSRRPRQHWEKERERD
RQINTALVYSHKNVSLCKCVRVCVHMCVFSCYGYVWLMKKQFKKAVTDAIMSRRAIRNMN
TLYPDATPEDLQASDNVCIICREEMVTGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDV
LRATNNNQTPAPAQAPPPAPAAPANAAANAAPPNVAPGMLPAFPPGMFPFWGPFPAVPPP
HAPPPGAAAAAEAPGAPHAPQNGTEATQGAGSSQLTSSAADTSTAAPAPGTGFPGFPFSF
PPPPFPTAPWLPMPPPPPPFVSSMPPPPPSLSQMSEEELRELEAEGRRGLEARLQCLQNI
HTLLDAAMLNIHHYLSTVATLTPPPTQSSTGETSGTNNTASSSAADSGRTEGAAQEEEDA
ASLNGAAASSPPDVSTLTASEGEGETEGMEEHAVGDGEPNTAELRRRRLRKLESGSSSSP
PVDN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagccttggtgactgtcaccagtctggcactgactggggcagtggtggca
cacgcctatctactaaagcaccagttctatcccactgtggtctacctcactaagagcagc
cccagcatggcggtgttgtacatacaggcctttgtgctggtgtttctgctgggaaagttc
atgagaaaggtcttttttggacagcttagggcagcagaaatggagcatctgatcgagcgt
tcgtggtacgcggtcactgagacctgtctggcattcactgtgttcagagatgacttctct
cctcgctttgttgccctcttcacactcctgctcttcctcaagtgcttccactggctggct
gaggaccgggtggactttatggaacgaagtcctaacatctcctggatttttcacatcaga
gtgttgtctctgatgggactgctggctgtcctggacttcctgtttgtcaaccatgcgtgt
cacagcatcatcaccagaggagcatctgttcagcttgtttttggatttgagtatgccatc
ctgatgaccatggtgctgacggtcttcatcaagtacatactgcacactgttgacctgcag
agtgaaaatccctgggacaacaaggccgtctatatgctctacacggagctcttcacaggt
gacgcgttgtcttcctccagacgtccacgtcagcactgggagaaagagagagagagagac
agacagataaataccgcccttgtatattctcacaaaaatgtgtctctctgcaaatgtgta
cgtgtgtgcgtgcacatgtgtgtgttttcctgctatggctacgtttggctgatgaaaaag
caattcaagaaagctgtaacagatgcgataatgtctcgaagagctattcgcaacatgaat
acactataccctgatgccacccctgaggacctgcaggcttctgacaacgtctgcatcatt
tgtcgggaggagatggtcaccggagccaagaagctgccatgtaatcacatctttcactcc
agctgcctgcgttcctggttccaaagacagcagacttgtccgacctgtcgtatggacgtc
ctccgggccaccaacaacaaccagactcctgctccagcccaggctccacctccggctcca
gcagcacctgctaacgcggctgctaatgccgcacctccaaacgtggctccaggcatgtta
ccagccttcccaccgggcatgttcccattctggggaccctttcctgcagtgcctccccct
cacgcccctcctcccggtgctgctgcagcagctgaagctcctggtgctcctcatgctcct
caaaacggcacagaagccacacaaggagcaggtagcagccagctcacatcatctgcggcc
gacacctccacggcagccccggctccaggaacgggcttcccgggattcccgttctccttc
cctcctcctcccttccctactgcaccctggctgcccatgccaccccctcctcctcctttt
gtatcgtcgatgcctccccctcctccttctctgtcccagatgtctgaggaggagttgagg
gagttggaggccgaaggccgccgtggccttgaagccaggcttcagtgtctccaaaacatc
cacaccctgctggacgccgccatgctgaacatccaccactacctcagcactgttgccacg
ctcacgcctcctccaactcagagcagcaccggagaaaccagtggcaccaacaacacggcc
tcgtcctccgcagctgacagcggcagaactgagggtgcagctcaggaggaggaggacgcc
gccagcttaaacggtgccgcagcctcgtctccaccggatgtctccacactcactgcctcg
gaaggtgaaggagagacagaagggatggaggaacacgcggtaggggacggggaaccaaac
actgccgaacttcggcgtcgccgccttcgcaagctggagtcggggtcgtcatcgtcaccc
cccgtagacaactga
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