Cynoglossus semilaevis (tongue sole): 103391560
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Entry
103391560 CDS
T04866
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csem03016
]
103391560 (lcmt2)
Enzymes [BR:
csem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
103391560 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
103391560 (lcmt2)
Transfer RNA biogenesis [BR:
csem03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103391560 (lcmt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
LCM
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_6
Kelch_1
Kelch_2
NANM
RAG2
Alkyl_sulf_C
Motif
Other DBs
NCBI-GeneID:
103391560
NCBI-ProteinID:
XP_016895624
UniProt:
A0A3P8UR88
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All DBs
Position
16:1473489..1486009
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AA seq
673 aa
AA seq
DB search
MPTTNRKKQEGKDTAVQGTNDSSVVSKASAAAQGYFKDTFIQHFVCKVVRRAPLINRGYY
VRWRAVDHCVRRFLQVTESCPKRQILSLGAGFDSLYFRLHAEKALTETVVFEVDFPDVAR
RKALLIMHNNTLRGMLDEHLPPSAGASHLWSSQYRLLGLDIREESQVKEALSSAGLDWES
PTLILSEVVLTYMETNWSDKVIKWAAKLFPQSLFVLYEQIHPCDPFGLIMQEHFRKLNST
LHALRQYPDAAAQRRRFLEKGWDQCVCLDINDFFFGLVPEEERRRIESLEPFDEYEEWHQ
KCSHYFILTASRGSSLAQALLSAPPVSVSSPVIPSWSQSLLSVKTVSVSVGGLGMASTSV
SPGLVLITGGCSREGRRSASQVLYRSPTGWRSWNVEPSADVGVRLYHTVTSCPSGGAVVF
GGRSSPLNPIRSVFKVNLDLCDLSENGDAVKLCVEQMHCTGEEPTPRWRHTATVVQHEGQ
DFLFVFGGKNESKAALGDAHFLRLQQQHWTEIRIEGAAPEARHSHSACSYQGHVLVFGGL
DSRGQPLGDMFLLKPTDRGFMWERVKTQPPAVPRYSHSAHVIEEKLVVVGGVWLHSDNVP
GVTVIDLDTGISMDFQLDSSAVPWPLMLHSFCCEPTDSEEPELIVIGGGGNCFSFGTHFN
LQPVTMALGAALG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgacgaataggaagaagcaagagggcaaagacacagcggtgcagggaaccaat
gacagcagtgtggtcagtaaagcatctgcagcagctcaaggctactttaaagacacattc
atccagcactttgtctgtaaagtggtcaggagagcgccgctcatcaacagaggttattat
gtccgctggagagctgtggaccattgtgtgaggaggttcctgcaggtgactgagagctgt
cccaaaagacagattttgtctcttggtgcaggttttgactcattatatttccgcctgcat
gcagaaaaagccctaactgaaactgtagtgttcgaggtggattttccagatgtggcccgg
cgtaaagctttgttgattatgcataataatacgttaagggggatgttagatgagcattta
ccaccctctgcaggagcttcgcatctgtggagtagtcagtaccgtctcttggggttggac
atccgagaagaatctcaagtgaaagaggctctgagttcagctggtttggactgggaatct
cctactcttattctctctgaagtggttctcacctacatggagacaaattggtcagacaag
gtcatcaaatgggcggcaaagctttttcctcagtcgcttttcgtcttgtatgagcagatc
catccgtgtgatcccttcggtctgatcatgcaggaacattttcgcaaactaaattccacc
cttcacgccctgcggcagtatccagacgcggctgcacagagacgcaggttcctggaaaag
ggctgggatcagtgtgtgtgtctggacataaatgatttctttttcgggctggttcctgag
gaggagcggagaagaattgaatccttggagccttttgatgagtatgaggagtggcatcaa
aaatgctcccactactttatcctgacagcatctcgaggttcctccctagctcaggcttta
ctctctgcccctccagtgtctgtgtcatcgcctgtcatcccgtcctggagtcagtcactt
ctgagtgtgaagactgtatcagtttctgtgggcggtctgggcatggcgtccacatctgtg
agtccagggctggttctgatcacaggaggttgtagccgagaaggcagaaggtcggccagt
caagtcctttacagaagtcctactggatggagatcctggaatgtggagccatcagcagat
gtaggtgtcagactttaccacaccgtcacatcctgccctagtggaggcgctgtggtcttc
ggaggtcgctcttctcctctcaacccaatcagaagtgtgtttaaagtaaacctggacctt
tgcgatctctccgagaacggagacgcagttaaactgtgtgtagagcagatgcactgtaca
ggtgaagaaccaacgccgagatggagacacacggctacagtcgtccagcacgaaggtcag
gacttcctgtttgtgtttggaggaaagaatgagtcaaaggccgccctgggcgacgctcac
tttctacgtcttcagcagcagcactggactgagatccgaatagagggcgctgctcctgag
gcccgccactctcactcagcctgttcgtatcagggccatgtgctcgtgtttggaggactg
gacagcagagggcagcctctgggggacatgttcttgttaaagcccaccgacagaggcttc
atgtgggagagggtaaaaactcagcctcctgctgttcccagatattctcattctgcccat
gtgattgaagagaagctggttgtggtgggcggagtctggctgcactcagacaacgttcca
ggtgtcactgtcatcgacctcgacacagggatcagcatggacttccaactggactcgtcg
gcagttccttggcctctgatgcttcactctttctgttgtgagccgacagactcagaggag
cctgagctgatcgtcattggtggcggaggaaactgtttctccttcgggacacacttcaac
cttcagcccgtcaccatggccctcggagctgccctgggataa
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