Cynoglossus semilaevis (tongue sole): 103391561
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Entry
103391561 CDS
T04866
Name
(RefSeq) ras-related protein Rab-5B-like
KO
K07888
Ras-related protein Rab-5B
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04137
Mitophagy - animal
csem04144
Endocytosis
csem04145
Phagosome
csem04148
Efferocytosis
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103391561
04145 Phagosome
103391561
04137 Mitophagy - animal
103391561
04148 Efferocytosis
103391561
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103391561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103391561
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103391561
04031 GTP-binding proteins [BR:
csem04031
]
103391561
Membrane trafficking [BR:
csem04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
103391561
Endosome - Lysosome transport
103391561
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103391561
Exosomal proteins of other body fluids (saliva and urine)
103391561
Exosomal proteins of colorectal cancer cells
103391561
Exosomal proteins of melanoma cells
103391561
GTP-binding proteins [BR:
csem04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
103391561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
103391561
NCBI-ProteinID:
XP_008326077
UniProt:
A0A3P8UPR2
LinkDB
All DBs
Position
16:complement(1466972..1473049)
Genome browser
AA seq
216 aa
AA seq
DB search
MSTRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLSEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagagggagcggaggccgcaccaatggttctctgccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtggggaagtccagcctagtgctgcgc
ttcgtcaagggacagttcgatgagtttcaggagaccaccattggagctgcattcctggcc
cagtcagtgtgtctggacgacaccacggtgaagtttgaaatttgggacaccgcagggcag
gagcgataccacagtctggctcctatgtactaccgtggagcccaggctgccatcgttgtc
tttgatataaccaaaccggagacgtttgaaagagccaaagcctgggtgaaggagctgcag
agacaggcgagtcccaacattgttatcgctctggctggaaacaaggccgacctgtcagag
aagagactagtagaatatgaggaagcgcaaacgtatgctgaagacaccggcctgctcttc
atggagacgtctgctaagacagccatgaacgtcaatgagctcttcctggccattgcgaag
aagatgccaaaaacagacacccaaaacccgacacatgcagcacgacatcgtggagtcaat
ctgcaggaccccgatgcccactccacccgagcctgctgcggaggaaactag
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