KEGG   Cynoglossus semilaevis (tongue sole): 103391561
Entry
103391561         CDS       T04866                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04137  Mitophagy - animal
csem04144  Endocytosis
csem04145  Phagosome
csem04148  Efferocytosis
csem05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:csem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103391561
   04145 Phagosome
    103391561
   04137 Mitophagy - animal
    103391561
   04148 Efferocytosis
    103391561
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103391561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103391561
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103391561
   04031 GTP-binding proteins [BR:csem04031]
    103391561
Membrane trafficking [BR:csem04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103391561
 Endosome - Lysosome transport
    103391561
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103391561
  Exosomal proteins of other body fluids (saliva and urine)
   103391561
  Exosomal proteins of colorectal cancer cells
   103391561
  Exosomal proteins of melanoma cells
   103391561
GTP-binding proteins [BR:csem04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103391561
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 103391561
NCBI-ProteinID: XP_008326077
UniProt: A0A3P8UPR2
LinkDB
Position
16:complement(1466972..1473049)
AA seq 216 aa
MSTRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLSEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagcaccagagggagcggaggccgcaccaatggttctctgccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtggggaagtccagcctagtgctgcgc
ttcgtcaagggacagttcgatgagtttcaggagaccaccattggagctgcattcctggcc
cagtcagtgtgtctggacgacaccacggtgaagtttgaaatttgggacaccgcagggcag
gagcgataccacagtctggctcctatgtactaccgtggagcccaggctgccatcgttgtc
tttgatataaccaaaccggagacgtttgaaagagccaaagcctgggtgaaggagctgcag
agacaggcgagtcccaacattgttatcgctctggctggaaacaaggccgacctgtcagag
aagagactagtagaatatgaggaagcgcaaacgtatgctgaagacaccggcctgctcttc
atggagacgtctgctaagacagccatgaacgtcaatgagctcttcctggccattgcgaag
aagatgccaaaaacagacacccaaaacccgacacatgcagcacgacatcgtggagtcaat
ctgcaggaccccgatgcccactccacccgagcctgctgcggaggaaactag

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