Cynoglossus semilaevis (tongue sole): 103391620
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Entry
103391620 CDS
T04866
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04145
Phagosome
csem04148
Efferocytosis
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04810
Regulation of actin cytoskeleton
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103391620 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103391620 (itgb5)
04148 Efferocytosis
103391620 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103391620 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103391620 (itgb5)
04810 Regulation of actin cytoskeleton
103391620 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103391620 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csem04515
]
103391620 (itgb5)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
103391620 (itgb5)
Cell adhesion molecules [BR:
csem04515
]
Integrins
Integrin beta subunits
103391620 (itgb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
PSI_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
103391620
NCBI-ProteinID:
XP_008326179
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Position
16:complement(2253415..2291569)
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AA seq
803 aa
AA seq
DB search
MWIPRWWMCRAALCCVILETLTHTVVGLNMCMSGSATSCEECLLIHPSCAWCAQQDFGKG
RTLTFRCDFSQNLQKRGCLTQHIEYPTSSVSVLQNNPLSSKGSGSTLYNVVQMAPQQISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNFR
LGFGSFVDKNISPFSYTSPKYQENPCKGYKPFPSCAPSFGFRNILSLTDEVDRFNQEVQK
QIVSRNRDAPEGGFDAILQAAVCKNEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGLCHLNDQNEYSASAQMDYPSLALLGEKLAENNIFLIFAVTKNLYIIYKNFTALIPGTT
VEILDQDSKNVIQLIVAAYNNIRSKVELTVWDQPEDISLSVTATCQDGQPLPGLRKCADL
KIGDTVSFNVSVDARSCPTRGADHSFTIKPVGFKDRLEVTVNYQCDCGCSRTAKTNSSIC
SSIGTYNCGTCHCEPGYLGAHCECQEGEAGSMYLSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGFIGDNCNCSIDTSTCVA
DDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFDLGRLADNQ
TCQRLCKDEIITVETLETNDPSAVLCVYKADNDCVMKFTYSEHFSGRSILTALKEPDCGG
GPDALTVLPVVVGSILLVGLVLLAVWKLVITIHDRREFAQFQSARSRARYEMASNPLYKQ
PVTTHSVETDFDMFGKSYNGGVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggattccgaggtggtggatgtgcagagccgctctgtgctgcgtgatcctggagact
ttaacgcacacagttgtaggacttaacatgtgcatgagtggcagcgctacttcctgtgaa
gaatgtctccttattcatccaagctgcgcctggtgcgcacaacaggattttgggaaaggc
cggactctgacatttcggtgtgatttcagtcagaacctgcagaagagaggctgcttaact
cagcacatagaataccccaccagcagcgtctcagttctgcaaaataacccactgagttcc
aaaggttctgggtcgactctgtacaatgtcgttcagatggcgcctcagcagatttccctc
agtttgcgaccaggagaccagacctggttcggcctgcaggtgcggcaggtcgaggattac
ccagtggatctctactacctgatggacctctccctttccatgaaagatgatctggacacc
atccgtaacctgggcaccaaactggcagaggagatgggaaaactcaccagcaacttcaga
ctcggctttggctcctttgtggacaaaaatatatccccgttttcctacacgtcaccgaag
taccaggagaatccatgcaaaggatacaaaccgtttcccagctgcgccccaagttttggt
ttccgcaacatcctgtcgctgaccgacgaagtggaccgattcaaccaggaggtgcagaag
cagatcgtatcgcgcaaccgcgatgcacccgagggtggatttgacgctatcctgcaggcc
gctgtttgtaagaatgaaataggctggagaaaagaagcctaccacctgctggtgttcgcc
acagatgatgttcctcacctggctctggacggcagactgggaggcctggtccagcctcac
gacggactgtgtcacctcaacgaccagaatgaatacagcgcctccgctcagatggattat
ccgtcgttggctctgctgggagagaaactggctgagaataacatcttcctcatctttgca
gtcacgaagaatctgtatattatttataagaatttcaccgcgttgatacccgggaccacg
gtcgaaatcctggatcaggactcgaagaacgtcatccagctgatcgttgcagcctacaat
aatatccggtctaaagtggagctgacggtgtgggaccagcctgaggacatcagtctgtcc
gttactgccacctgtcaggatggacaacctctgccgggactgaggaagtgtgccgacctg
aagataggagacactgtttcatttaacgtcagcgtggatgcgaggagctgcccgacccgc
ggcgctgaccacagcttcaccatcaaacccgttggcttcaaggaccgtctggaggtgact
gtgaactatcagtgcgactgtggctgcagtcgaacggcgaaaaccaacagcagcatctgc
agctctatagggacctacaactgtggcacctgtcactgtgaaccgggctacctgggagct
cactgtgagtgtcaggagggcgaggccggcagcatgtacctgagcgcctgcagagaagct
gaggggaagcagatctgcagcggccgaggggagtgcagctgtaaccagtgtctctgctac
gagtccgagtttgggaagatttacggcagcttctgcgagtgcgacgacttctcctgcgct
cgccacaaagggatactctgctctggtcatggagaatgtcactgcggtgaatgtaaatgt
cacgccggtttcatcggggacaactgtaactgctccattgatacgtctacctgcgtggct
gatgatggacagatgtgcagcgggcgcggaaactgtgtgtgcggccgctgtcagtgcacg
gagcctggagcctttggagacacctgtgagaagtgccccacttgccccgacgcctgtggt
acgaaaagggagtgcatcgagtgtagactattcgacttgggacgactcgcagacaatcag
acctgccagcgtctgtgcaaggatgaaatcatcactgtggagacgttagagaccaacgac
cccagtgctgtgttgtgtgtgtacaaggcagacaacgactgcgtcatgaagtttacctac
tctgaacatttcagtggacgttcaattctcactgctctgaaggaaccagattgcggaggt
ggacctgacgccctcaccgtgctgccggttgtggtcggcagcatcctgctagtgggcctg
gtcctgctggctgtttggaagctggttatcaccatacacgaccgcagggagttcgcacaa
ttccagagtgcacgatcaagagcacgatacgagatggcgtccaaccctctgtacaaacag
cccgtcaccacacactctgtggagaccgatttcgacatgtttggaaagtcctacaacgga
ggggtccactga
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