KEGG   Cynoglossus semilaevis (tongue sole): 103391620
Entry
103391620         CDS       T04866                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04145  Phagosome
csem04148  Efferocytosis
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04810  Regulation of actin cytoskeleton
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103391620 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103391620 (itgb5)
   04148 Efferocytosis
    103391620 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103391620 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103391620 (itgb5)
   04810 Regulation of actin cytoskeleton
    103391620 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103391620 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:csem04515]
    103391620 (itgb5)
Membrane trafficking [BR:csem04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    103391620 (itgb5)
Cell adhesion molecules [BR:csem04515]
 Integrins
  Integrin beta subunits
   103391620 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin Integrin_b_cyt PSI_integrin EGF_2 I-EGF_1 vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 103391620
NCBI-ProteinID: XP_008326179
LinkDB
Position
16:complement(2253415..2291569)
AA seq 803 aa
MWIPRWWMCRAALCCVILETLTHTVVGLNMCMSGSATSCEECLLIHPSCAWCAQQDFGKG
RTLTFRCDFSQNLQKRGCLTQHIEYPTSSVSVLQNNPLSSKGSGSTLYNVVQMAPQQISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNFR
LGFGSFVDKNISPFSYTSPKYQENPCKGYKPFPSCAPSFGFRNILSLTDEVDRFNQEVQK
QIVSRNRDAPEGGFDAILQAAVCKNEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGLCHLNDQNEYSASAQMDYPSLALLGEKLAENNIFLIFAVTKNLYIIYKNFTALIPGTT
VEILDQDSKNVIQLIVAAYNNIRSKVELTVWDQPEDISLSVTATCQDGQPLPGLRKCADL
KIGDTVSFNVSVDARSCPTRGADHSFTIKPVGFKDRLEVTVNYQCDCGCSRTAKTNSSIC
SSIGTYNCGTCHCEPGYLGAHCECQEGEAGSMYLSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGFIGDNCNCSIDTSTCVA
DDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFDLGRLADNQ
TCQRLCKDEIITVETLETNDPSAVLCVYKADNDCVMKFTYSEHFSGRSILTALKEPDCGG
GPDALTVLPVVVGSILLVGLVLLAVWKLVITIHDRREFAQFQSARSRARYEMASNPLYKQ
PVTTHSVETDFDMFGKSYNGGVH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtggattccgaggtggtggatgtgcagagccgctctgtgctgcgtgatcctggagact
ttaacgcacacagttgtaggacttaacatgtgcatgagtggcagcgctacttcctgtgaa
gaatgtctccttattcatccaagctgcgcctggtgcgcacaacaggattttgggaaaggc
cggactctgacatttcggtgtgatttcagtcagaacctgcagaagagaggctgcttaact
cagcacatagaataccccaccagcagcgtctcagttctgcaaaataacccactgagttcc
aaaggttctgggtcgactctgtacaatgtcgttcagatggcgcctcagcagatttccctc
agtttgcgaccaggagaccagacctggttcggcctgcaggtgcggcaggtcgaggattac
ccagtggatctctactacctgatggacctctccctttccatgaaagatgatctggacacc
atccgtaacctgggcaccaaactggcagaggagatgggaaaactcaccagcaacttcaga
ctcggctttggctcctttgtggacaaaaatatatccccgttttcctacacgtcaccgaag
taccaggagaatccatgcaaaggatacaaaccgtttcccagctgcgccccaagttttggt
ttccgcaacatcctgtcgctgaccgacgaagtggaccgattcaaccaggaggtgcagaag
cagatcgtatcgcgcaaccgcgatgcacccgagggtggatttgacgctatcctgcaggcc
gctgtttgtaagaatgaaataggctggagaaaagaagcctaccacctgctggtgttcgcc
acagatgatgttcctcacctggctctggacggcagactgggaggcctggtccagcctcac
gacggactgtgtcacctcaacgaccagaatgaatacagcgcctccgctcagatggattat
ccgtcgttggctctgctgggagagaaactggctgagaataacatcttcctcatctttgca
gtcacgaagaatctgtatattatttataagaatttcaccgcgttgatacccgggaccacg
gtcgaaatcctggatcaggactcgaagaacgtcatccagctgatcgttgcagcctacaat
aatatccggtctaaagtggagctgacggtgtgggaccagcctgaggacatcagtctgtcc
gttactgccacctgtcaggatggacaacctctgccgggactgaggaagtgtgccgacctg
aagataggagacactgtttcatttaacgtcagcgtggatgcgaggagctgcccgacccgc
ggcgctgaccacagcttcaccatcaaacccgttggcttcaaggaccgtctggaggtgact
gtgaactatcagtgcgactgtggctgcagtcgaacggcgaaaaccaacagcagcatctgc
agctctatagggacctacaactgtggcacctgtcactgtgaaccgggctacctgggagct
cactgtgagtgtcaggagggcgaggccggcagcatgtacctgagcgcctgcagagaagct
gaggggaagcagatctgcagcggccgaggggagtgcagctgtaaccagtgtctctgctac
gagtccgagtttgggaagatttacggcagcttctgcgagtgcgacgacttctcctgcgct
cgccacaaagggatactctgctctggtcatggagaatgtcactgcggtgaatgtaaatgt
cacgccggtttcatcggggacaactgtaactgctccattgatacgtctacctgcgtggct
gatgatggacagatgtgcagcgggcgcggaaactgtgtgtgcggccgctgtcagtgcacg
gagcctggagcctttggagacacctgtgagaagtgccccacttgccccgacgcctgtggt
acgaaaagggagtgcatcgagtgtagactattcgacttgggacgactcgcagacaatcag
acctgccagcgtctgtgcaaggatgaaatcatcactgtggagacgttagagaccaacgac
cccagtgctgtgttgtgtgtgtacaaggcagacaacgactgcgtcatgaagtttacctac
tctgaacatttcagtggacgttcaattctcactgctctgaaggaaccagattgcggaggt
ggacctgacgccctcaccgtgctgccggttgtggtcggcagcatcctgctagtgggcctg
gtcctgctggctgtttggaagctggttatcaccatacacgaccgcagggagttcgcacaa
ttccagagtgcacgatcaagagcacgatacgagatggcgtccaaccctctgtacaaacag
cccgtcaccacacactctgtggagaccgatttcgacatgtttggaaagtcctacaacgga
ggggtccactga

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