Cynoglossus semilaevis (tongue sole): 103391729
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Entry
103391729 CDS
T04866
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103391729 (sox1)
Transcription factors [BR:
csem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103391729 (sox1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103391729
NCBI-ProteinID:
XP_016895227
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Position
16:3510931..3516202
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AA seq
347 aa
AA seq
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MYSMMMETDLHSPGPQTNTTAGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGTASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHHHAHHHHSHNPQPMHRYDMTALQYSPISN
SQTYMSASPSGYGSLTYTQHQSSGVSSSSSAMGTLGSLVKSEPSVSPPVSGTHTRGPCPG
DLREMISMYLPTGEPGDPAMQSRLHALPQHYQSAAAGVNGTVPLTHI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgacctccactcccccggcccccaaacgaacacgacc
gcgggacaaacggggccaaacagcggctccaaagcgaaccaggaccgcgtgaagagaccg
atgaacgcgttcatggtctggtcccgcgggcagcggaggaagatggcacaggagaacccc
aaaatgcacaactccgagatcagcaagaggctgggggccgagtggaagttaatgtccgag
tcagagaagcgacctttcatcgacgaggcgaagcgactgcgggccatgcacatgaaggag
catccggattacaagtaccggccgagacggaagaccaagaccctgctgaagaaggacaaa
tattccctggccggtggactgctttccgggcctagcgggggcggcggagttggtttaggg
gtcggcatgagttcgtcgggggtcgggcagaggttggagagccccgggggccacggcggc
acggccagctccggctacgcgcacatgaacggctgggccaacggtgcgtactctgggcag
gtggctgcggcggcggcggctgctgccatgatgcaggaggctcagctcgcctacagccag
cacccgggcagcggggcgcaccaccatcaccaccatcacgcacatcatcaccactcccac
aacccgcagcccatgcaccgctacgacatgacggcgctgcagtacagccccatctcgaac
tctcagacctacatgagcgcgtctccctctggctacggcagcctcacctacacgcagcac
cagagctccggcgtctcctcctcctccagcgccatggggacgttaggctcactggtcaag
tcagagccgagcgtaagcccccccgtcagcggcacacacactcggggcccctgccccgga
gacttgagagagatgataagcatgtatttacccaccggggagccaggggacccggccatg
cagagcagactccatgccctgcctcagcactaccagagcgccgcggctggagtgaacggg
acggtccccctaacacacatttag
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