KEGG   Cynoglossus semilaevis (tongue sole): 103391743
Entry
103391743         CDS       T04866                                 
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4 isoform X5
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03410  Base excision repair
csem04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103391743 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    103391743 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csem03400]
    103391743 (parp4)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103391743 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 BRCT_2 VWA BRCT VWA_2 VWA_CoxE PARP_reg Med9 PTCB-BRCT
Other DBs
NCBI-GeneID: 103391743
NCBI-ProteinID: XP_008326359
UniProt: A0A3P8UZ93
LinkDB
Position
16:4366711..4383922
AA seq 1645 aa
MAVFKDCTVLLELKTLPFKEKKKLKSAITENGGNVSYVVNKQCSFIVATDVTSLSSNRLR
SIQKYQTPVVGLHYVNSCIKNGAVLPLDDYKLDTSSSTSPSSFSLRTPEPDLIPCQVLGK
EKKQMELCHFNKVPKKTTDPGAPPPWHEGILKKYRLYSESHSDLPSYPNHFQVAKFKTFK
KINDYVWYVLELQSCRGQKEQRYRVVQFRKDKHSAKGVMDVLVFPPTAEEALEVFKALEV
TLLSSGHREMSYELVDAPSLGSFQLQQLLLDEKLSTMNLSETVAMFVELVWTECLGYLDN
VLQVSVDKLSLNDVTRAEGLLLQVQKMLRDKKHVGMRELYLEFHSLLPHKQRTSLDMKSI
SQKLDLCQLIRDILNVTEMTLGSPTPSSLGKYRALRCCIEAVPPESSEFHTVIALLGDSS
LQIQQVLKVARVLELQTFKSDLGNIKPLLHSSSPSNFVGILSRGLLLPHIGVEHHGIERT
DVGNLGSGIYFSNAVSTCLKYSKPSTTDGSRLLLVCDVALGKCKKVQKKDVTLTKAPEGH
DSVHGVRCSGDNDSEFEDDEFVVYSPDQVKLKYVVQFTVEDDQLKEFSPAVNTTQEPVSM
TETQTDMSLTTDDEFIENTLEDVTPGLLDSAGQQLPLQAVHVKCKLMDLVSQVIIFQKYT
NTSTTPIEAKYVFPLDDLAAVCGFEAFINGKHVVGQVKEKLQARKEYKEAVEKGHGGYLM
DQDAANVFTISVGNLPPNSTVLIKVTFVSELIIKDGGILFTLPGSVAPWQERSALNQTTQ
VTVEKVSVTGEAASSREFSLDMSVEMPNAIKTLESTTHQIKMKLTDCKAVVSVLPGQVIG
TEGFQLFVSLSVVHLPRMWVEQHPDKNNQACMLVFYPDFDTGFNSEDNEIVLLVDNSESM
KGEPASVARRIGHLVLKTLGKNHKVRINIIVFGTAYMETFEMAQPLGEVYQIVENAIKTP
SSIGGSTELWRPLRTLSLLPPSRGIRNLLLLSDGHIQNPELILQLVRDNVQHSRLFTCGV
SPTANQHMLRALAQAGGGAYEFFDTKMKHKWADKVAFQVKRMASPGCTSVSVKWQQFNPI
APPAIQAPKQLHALFNNCHTLVYGFVPHCTQATLHGNLSGQELKTMVSTTELQKTKGTFL
HKLTARALIRDYEDGSLDTNEAKHEGKKAELKSFVIQLSEEFSILSQFTSFVAIEERDSE
QPEGFTDISKLVAEEDVDLLPYMSWVFPEEQRESHVDELLTSFSSVDDDEEEEEEEFCGN
TIQGDIYDMIEYSSVCQSLDYDPPPPLPPPSPPTTTVLAEVPLAKFGIPPPPPPPYRPKR
FFQISGSMLPPCPPPPPCPPTTNVLADILENQESSLPRFRPPPPSFDLCSSEVGSELYGA
LPISLHERPCMNSIPHKLAGSSSVGPSSASSFHRKAFSSFGLKTQELEHTTSSDHRRHKA
FKRTLVNKCSISPDLQQDSASEVMENRAWSAVEIKRFYTRGRRNRAAAVVNWTQIFLIQH
IEGYWELTPQLGNLINVNVDVFANVFLKGKGICSLGMKAHTDILRLVATLLVLQLMRIEK
LEEGKLLRSLFCLDSIQHRPPRWEALQKAVEWVCWADRQYPSIYSRLEFGLSWESSTRQL
LGYDSLPTFSHLHGMNVVRPNLCCS
NT seq 4938 nt   +upstreamnt  +downstreamnt
atggctgtgtttaaggactgcactgtgcttttggagctgaaaacgctgcctttcaaggag
aaaaagaagctgaagtcagcaataacagagaatggagggaatgtttcctatgtggtcaat
aaacagtgctccttcatagtggccactgatgtgaccagcctgagcagtaacagactacgc
agcatccaaaagtaccaaacccctgtggttgggttgcactatgtgaacagctgtataaaa
aacggagctgttctgcctttggatgattacaagctggacacttcctcttctacatctcca
tcttctttttctctccgcacaccagagcccgacctaatcccatgtcaggttttaggaaaa
gaaaaaaaacagatggagttatgccattttaacaaagtaccaaagaaaacaacagaccct
ggtgctcctccaccatggcatgaaggcattctgaaaaagtacagactttactctgaatcc
cattctgatctcccatcatatccgaaccattttcaagtggccaagtttaaaacctttaaa
aagataaatgactacgtctggtatgtgctggagctacaaagttgcagaggacagaaagaa
cagcggtaccgtgtggttcaatttcgtaaggacaagcactcggctaaaggagtgatggat
gtgctggtgtttccacctaccgcagaagaagctttagaagtattcaaggcattggaggtc
actttgttgtctagtggtcacagggaaatgtcctacgagctggtagatgcccccagcctt
ggctcatttcagcttcagcagctgttgcttgatgagaaactgagcacaatgaacctatca
gagacggtggccatgtttgtggagctggtgtggaccgagtgtttgggttaccttgacaac
gttctccaagtttccgtcgacaagctcagcctcaacgatgtgaccagagccgaggggctg
ctgctccaggttcaaaagatgctaagagataaaaaacatgttggaatgagagaactttat
ttagagtttcactctctgctgccacataaacaaaggacctctctagatatgaagtccatc
tctcagaagctggacttgtgccagttaattagagatattctgaatgtgactgagatgact
ctgggaagccctactccttccagcttaggaaagtaccgtgcactgaggtgctgcattgaa
gccgttcctcctgaaagctcagagttccacactgtgatagctttgctgggagacagcagt
ctgcagatccaacaggttctgaaggtggccagagtgttggagcttcagacttttaaaagt
gatcttgggaacattaagccactccttcactcttccagccccagcaactttgttggaatt
ctctctcgtggtcttctcttgccccacattggagtggagcatcatgggattgagaggaca
gatgtgggaaacctgggcagtggaatttatttcagcaatgctgtgagcacctgtcttaaa
tactctaaacccagcaccactgacggttctcggctgctgctggtctgtgacgtggcgttg
ggtaaatgtaagaaggtccaaaaaaaagatgtgacgctgaccaaagccccagagggccac
gacagtgtacacggagtcagatgctctggtgacaacgactccgagtttgaggatgatgag
tttgtggtgtacagtcctgatcaagtgaaactcaaatacgtggttcagttcactgttgag
gacgaccaactgaaggagtttagtcctgctgtaaacaccacacaagagcctgtttccatg
acagaaacccagactgacatgtcgttaaccaccgatgacgagttcattgaaaacacatta
gaggatgtgacgcctggtttgctggacagcgctggacaacagcttcctctacaggccgtt
cacgtgaagtgcaaacttatggacttggtctcacaggtgataattttccaaaaatacacc
aacacaagcaccacgcccattgaggcaaagtatgtcttcccactggatgatttagcggca
gtgtgtggatttgaagccttcattaacggcaaacatgtcgtgggacaggtgaaggaaaag
ctgcaagctcggaaggagtacaaggaggctgtggagaaaggccatggagggtatctgatg
gaccaggatgctgctaacgtcttcaccatcagtgtgggaaacctgccaccaaacagtact
gtcctgattaaagtgacatttgtgtctgagctgatcatcaaagatggaggaattctgttc
accctgcctggaagtgtggctccgtggcaagagaggtcagcactgaaccagaccactcaa
gtcactgtggaaaaggtgtctgtgactggggaggcagcaagttcaagagagttttcgttg
gatatgtcagttgaaatgccaaatgccatcaaaaccctggagagcaccactcaccaaatt
aagatgaagttaacagactgtaaggcagtggtgagcgtgctgccaggacaagtcattggc
acagagggtttccagctgtttgtcagtctgtctgtggttcatttgccaaggatgtgggtg
gagcaacatccggataagaacaatcaggcctgcatgttggtcttctatccagactttgac
accggcttcaactcagaagacaatgaaatcgtcctgttagtggacaattctgagtccatg
aagggtgagcctgccagtgtcgctcggagaatcggacacctggtcctaaaaacccttgga
aaaaatcacaaagtgagaatcaacatcatcgtttttggcacagcttacatggaaacattc
gagatggcacaacctcttggcgaggtctaccagatagtagaaaacgctatcaagacgccc
tcttcaataggtggcagcactgagctctggcgtccactgcgcactctaagcttgctgcct
ccttcccgcggaatcagaaatctgctgctgctctcagacggacacattcagaacccagag
ctgatcctgcagctggtcagagacaacgttcagcacagtcgcctcttcacctgcggcgtc
agtccaacagccaatcagcacatgctaagagctctggctcaggctgggggaggagcctat
gaattctttgatacaaaaatgaagcacaagtgggcagataaggtggcgttccaagtgaag
cgtatggcctctccaggctgtacctcagtgtcagtgaagtggcaacagttcaacccaata
gcgcctccagctatacaggctcccaaacagctccatgctctcttcaacaactgccacaca
ctggtttatggcttcgttcctcactgcacacaggcaacacttcatgggaacctgagtggt
caggaactcaagacaatggtgtcaaccactgagctgcagaagactaaaggcacatttctt
cacaagctcacagcaagggccctcatcagggactacgaagatgggagcctggacaccaat
gaagccaaacatgagggcaagaaagcagaattaaaatcctttgttattcagctaagcgaa
gagttctccatcttgtcccagttcaccagcttcgtagctattgaagaaagggactcggaa
caacctgaaggattcactgacatctccaagttggtcgcagaggaagatgtggacctgctc
ccttatatgagctgggtttttccagaggaacaaagggaaagtcatgtggacgagttgctt
acctcattttcctcagtagatgatgatgaagaagaagaagaagaagaattttgtgggaat
accattcagggcgacatatatgacatgattgagtattcttcagtctgccagtctttggac
tatgacccaccccctcctcttccacctccctccccccctactactactgttttggctgaa
gtacctttagccaaatttggcattccacctcctcctcctcctccatatcgtccaaaaaga
ttttttcaaatctcaggatctatgttaccgccatgtcctcctccacctccctgcccccct
actactaatgttttggcagatattctagaaaaccaggaatcttcattgccacgtttccgc
cctcctcctccttccttcgacctctgcagcagcgaagtcggttcggaattgtacggtgca
ttgcctatttctttacatgaaaggccttgcatgaattccatcccacacaagttggctggg
tcttcctcggttgggccttcctcagcctcttcattccatagaaaggcttttagttcattt
ggcctcaagactcaagagttagaacacactacgtcttctgatcatcgcagacataaagct
ttcaaaaggacactggtaaataaatgcagtatctcaccagatttacagcaagacagtgca
tcagaggttatggagaacagggcctggagtgcagtagagataaagaggttttacactaga
gggcgcagaaaccgtgcagcggcagttgtcaactggacgcagatcttcctgattcagcac
attgaaggttactgggagctaaccccacaactgggaaatctgatcaacgtcaatgttgac
gtctttgccaatgtgttcctcaagggcaagggcatctgttctctgggtatgaaggcccat
acagacatactgaggttggtggcaactctgctggtcctacagctgatgaggatagaaaag
ctggaagagggcaaactgctgcgaagccttttctgtttagactccatccagcacagacca
ccgcggtgggaggcgctgcagaaggcagtggagtgggtttgttgggctgacaggcagtac
ccctcaatctacagccgcctggagttcggtctgagctgggagtcctccacccgtcagctg
ctgggctacgacagcctgcccaccttctcacacctgcatggaatgaacgtagtgcgccca
aacttgtgctgttcataa

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