KEGG   Cynoglossus semilaevis (tongue sole): 103391789
Entry
103391789         CDS       T04866                                 
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
  KO
K23455  collagen type VIII alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 103391789
NCBI-ProteinID: XP_008326417
UniProt: A0A3P8UX19
LinkDB
Position
16:5027293..5055079
AA seq 740 aa
MPPLSGPHMLTLLQLAVLTCVTGGAYYGHKQHPQQYQPVQHHQHMGMGKEGFPQQQFIGK
EIPYMQYPHYRKELPQIPVFKGKESGRKGGRYNGGQDKGQTIPSGAEGVPQGQPGPAGPP
GPEGPPGPPGPPGDGQPGLVGQPGPAGPPGLPGIGKPGLPGLPGKPGGNGEPGPQGEIGP
RGEEGPPGQPGPQGPPGPPGLPGIGKPGVQGLPGQPGLKGLPGHKGLPGLPGLPGPKGDK
GMGQPGLPGHKGLPGHPGPIGPRGLPGFGKPGLNGLPGPQGPPGEKGYPGEPGPAGLTGE
GGQPGPPGLPGQGKPGQNGLPGQPGVQGPKGHQGIPGLPGKPGLPGFGKPGLPGPNGDKG
MSGPPGSPGPKGEKGHVGLPGMLGPPGPNGPSGPPGPMGPSGGLGSPGPKGDCGEVGPKG
LDGGQGEPGPSGLPGKDGLPGEIGEPGPKGPPGLNGPKGDEGHKGLPGTPGPIGLPGPKG
QVGPPGEEGPQGPLGIPGIDGSAGPIGPPGFPGPKGDIGAPGLPGIAGEGIQGVSGPIGP
PGRDGPLGPPGQPGQPGPPGPPGIPGLSPDMAGVLSEMGPGLDGVKAGGYGKKGKYGGEG
AEVMGVSGLEMPAFTAIATTPFPPVGTPVIFDKLLYNGRQNYNPQTGIFTCDMPGIYYFA
YHIHCKGANVWVALMRNNDPVMYTYDEYKKSFLDQASGSAVLPLQAGDTVYIQMPSDQAS
GLYAGQYVHSSFSGYLLYPM
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgcctcccctctctggcccccacatgctgaccctgctgcagcttgcagtactaacttgt
gtgactggtggggcctactatggacacaagcaacacccacaacaatatcaaccagtgcag
caccaccaacacatgggcatgggaaaagaaggatttcctcagcagcagtttattggcaaa
gagattccctacatgcagtatccacattacaggaaggagttaccccagatacccgtgttc
aagggtaaagaaagtggtcgtaaaggaggtcgatataatggtggtcaagacaaaggtcag
acaattcctagtggtgcagagggagttcctcagggacaacctggtccagctgggccacct
ggaccagaaggaccaccaggacctcctgggcctcctggggatggacagccaggacttgtt
ggacagcctggacccgcaggacctccaggcttgccaggcattggaaagccaggtttgcca
ggactgccaggaaagccaggaggaaatggcgagcccggtccacaaggagaaattggtcct
aggggtgaggaagggccacctggacagccagggcctcaaggtcctccaggaccccctgga
ctaccaggaataggtaaaccaggagtacaaggactacctggtcaaccaggattgaaagga
ttgccaggtcacaaagggctgccaggactgccaggattaccagggccaaagggggataaa
gggatgggtcaaccaggtctacctggtcacaaagggcttccaggacacccaggaccaatt
ggcccaagaggactgcctggttttggaaagcctgggcttaatggtttaccaggcccacaa
ggacccccaggggagaaagggtatcctggagagcctggaccagctgggttaactggagaa
ggaggacagcctggcccaccagggttacctggccaaggaaaaccaggtcagaatggtctc
ccaggtcaaccaggtgtacaaggacctaagggacatcaaggaataccaggtttgccaggg
aaaccaggtctaccaggatttggtaaaccaggacttccaggaccaaatggtgacaaagga
atgagtggaccccctggatctccaggaccaaaaggagaaaaaggacatgtgggactgcct
ggcatgctcggacctcctggtccaaatggcccatctggtcccccaggtccaatgggaccc
tcagggggtttgggttcccctggtcctaaaggtgactgtggtgaagtaggacctaaaggg
cttgatggaggccagggtgaaccaggtccttctggcttgcctggtaaagatggtctacct
ggagaaattggagaaccaggcccaaaaggtcctccggggctcaatggtcctaaaggagat
gagggtcataaaggtttacctggtacccctggtcctattggactacctggaccaaaaggg
caggtaggaccaccaggtgaagagggacctcagggtcccctaggaattccaggaatcgat
gggtcagcagggccaataggtcctcctggttttcctgggccaaagggagacattggtgca
ccaggtctaccagggattgcaggagaaggaatccaaggagtttctggtcccattggacca
ccaggacgagatggtcctttaggacctccaggacaaccaggtcagcctgggccaccaggc
ccaccaggtatacctggcttgtctcctgacatggctggagtcctttctgagatgggccct
ggactcgatggtgtcaaggctggtggttatgggaaaaagggcaagtatggaggtgagggg
gcagaagtgatgggtgttagtgggttggaaatgccagccttcactgcaatagcaacaaca
ccctttcctcctgtgggcactccagtgatcttcgacaagctcttgtacaatggtcgccaa
aactacaaccctcagacgggaattttcacctgtgacatgcctggcatttattattttgcc
taccacatccactgcaaaggagccaatgtttgggtggctttgatgaggaacaatgatcca
gtcatgtacacatatgatgaatacaaaaagagtttcctagaccaagcgtcagggagtgca
gtgttacctctacaagcaggagacactgtgtatatacagatgccctcagatcaggcttca
ggactctatgctgggcaatacgtgcactcctctttctctgggtatctgctgtatccaatg
taa

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