Cynoglossus semilaevis (tongue sole): 103391789
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Entry
103391789 CDS
T04866
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
103391789
NCBI-ProteinID:
XP_008326417
UniProt:
A0A3P8UX19
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Position
16:5027293..5055079
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AA seq
740 aa
AA seq
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MPPLSGPHMLTLLQLAVLTCVTGGAYYGHKQHPQQYQPVQHHQHMGMGKEGFPQQQFIGK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NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctctctggcccccacatgctgaccctgctgcagcttgcagtactaacttgt
gtgactggtggggcctactatggacacaagcaacacccacaacaatatcaaccagtgcag
caccaccaacacatgggcatgggaaaagaaggatttcctcagcagcagtttattggcaaa
gagattccctacatgcagtatccacattacaggaaggagttaccccagatacccgtgttc
aagggtaaagaaagtggtcgtaaaggaggtcgatataatggtggtcaagacaaaggtcag
acaattcctagtggtgcagagggagttcctcagggacaacctggtccagctgggccacct
ggaccagaaggaccaccaggacctcctgggcctcctggggatggacagccaggacttgtt
ggacagcctggacccgcaggacctccaggcttgccaggcattggaaagccaggtttgcca
ggactgccaggaaagccaggaggaaatggcgagcccggtccacaaggagaaattggtcct
aggggtgaggaagggccacctggacagccagggcctcaaggtcctccaggaccccctgga
ctaccaggaataggtaaaccaggagtacaaggactacctggtcaaccaggattgaaagga
ttgccaggtcacaaagggctgccaggactgccaggattaccagggccaaagggggataaa
gggatgggtcaaccaggtctacctggtcacaaagggcttccaggacacccaggaccaatt
ggcccaagaggactgcctggttttggaaagcctgggcttaatggtttaccaggcccacaa
ggacccccaggggagaaagggtatcctggagagcctggaccagctgggttaactggagaa
ggaggacagcctggcccaccagggttacctggccaaggaaaaccaggtcagaatggtctc
ccaggtcaaccaggtgtacaaggacctaagggacatcaaggaataccaggtttgccaggg
aaaccaggtctaccaggatttggtaaaccaggacttccaggaccaaatggtgacaaagga
atgagtggaccccctggatctccaggaccaaaaggagaaaaaggacatgtgggactgcct
ggcatgctcggacctcctggtccaaatggcccatctggtcccccaggtccaatgggaccc
tcagggggtttgggttcccctggtcctaaaggtgactgtggtgaagtaggacctaaaggg
cttgatggaggccagggtgaaccaggtccttctggcttgcctggtaaagatggtctacct
ggagaaattggagaaccaggcccaaaaggtcctccggggctcaatggtcctaaaggagat
gagggtcataaaggtttacctggtacccctggtcctattggactacctggaccaaaaggg
caggtaggaccaccaggtgaagagggacctcagggtcccctaggaattccaggaatcgat
gggtcagcagggccaataggtcctcctggttttcctgggccaaagggagacattggtgca
ccaggtctaccagggattgcaggagaaggaatccaaggagtttctggtcccattggacca
ccaggacgagatggtcctttaggacctccaggacaaccaggtcagcctgggccaccaggc
ccaccaggtatacctggcttgtctcctgacatggctggagtcctttctgagatgggccct
ggactcgatggtgtcaaggctggtggttatgggaaaaagggcaagtatggaggtgagggg
gcagaagtgatgggtgttagtgggttggaaatgccagccttcactgcaatagcaacaaca
ccctttcctcctgtgggcactccagtgatcttcgacaagctcttgtacaatggtcgccaa
aactacaaccctcagacgggaattttcacctgtgacatgcctggcatttattattttgcc
taccacatccactgcaaaggagccaatgtttgggtggctttgatgaggaacaatgatcca
gtcatgtacacatatgatgaatacaaaaagagtttcctagaccaagcgtcagggagtgca
gtgttacctctacaagcaggagacactgtgtatatacagatgccctcagatcaggcttca
ggactctatgctgggcaatacgtgcactcctctttctctgggtatctgctgtatccaatg
taa
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