Cynoglossus semilaevis (tongue sole): 103391856
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Entry
103391856 CDS
T04866
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103391856 (sh3tc1)
Membrane trafficking [BR:
csem04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103391856 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_10
TPR_7
SH3_2
SH3_1
TPR_NPHP3
SH3_9
Motif
Other DBs
NCBI-GeneID:
103391856
NCBI-ProteinID:
XP_008326517
LinkDB
All DBs
Position
1:34012064..34030048
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AA seq
1273 aa
AA seq
DB search
MPQKKRAVPLLLNVVRGPERLPATQQYQETLLRKLHTLQSDSTKVNTLFAELCAHVTSIN
SEEKVIIIGFENFEEIWKFCTYYRVGFVGHCLEHLLLDDQLWLESFEEDIAIDVSIPEET
LNRVYTGLLMQEGSLFAYSSANQMFDSSTSGRDIYLEQGDLAQFEPPFLDSGWTVRSLSD
GTRGTAPNPALKPVDPFHQWFLKSCAEAVLIGEWKAEITCPLQFAHGTCLATVEYDAEGP
FELSLAQGNLIVIVGHMISGFDWFIGRKEMTGEVGLVKTSHVKPTTDSVETTDVFLENNE
GMFPNPQQDDIKKKAVAILKKKSQNNAACDYKLDKVNYTDFEKNQSGTTSHKADTQRIEG
LREKMQTILKQPKSCLSDITSADISLKDSVMLTEPETIPPCFTVHPILEENNSNSKILAP
LLSFLDGADCKVEFGLLYQLNPEVLTSSIFCGHSCEDELISFLSVGREMARRKKILWSQT
RLCFLLGKICAGRSKFSQARVYFEETLRVPQECFRDFKLLASTYYNLATVYLLQKNMESF
SALMERLVALIMGIPTCLECLKDTLVLQYFLKKAVFYNNKTAEARACCLLAKHHWTCAEK
VVPYLERLLVLGAESELPWNVSLSQGYLTLAHFYQELGLLHLSTSSARKASQQPTTALSD
CLDSMILVLENVDKLHGTIQQAFIPSQALPFLYKALSFALTEQEGGSNNHVLSHQLAFCL
SKQFYKHRMFDRAIDHMNVLCRDGLPLYQIPVSETESNNVLLWMAWLHIDNNQPSLALDI
LDLVLSSIPEHCTTPQEGVILNLQGVALCNLGYLRKAAESYQAAVDICQEYEDLANWAVA
QGNLGLLSLKAGAKKLAERHLTEAVQLFSELEGEGHEANFIGVLLELGRHFVKQREIHHG
KGCYEWALLLAVKANLFDCQLSATRILCHLYKYDCPDQTRCIIYNEYQIHLLRHLKDQIQ
ESEVLEILSEIYLNLGTERAYRAALDCTKSSLGIFIDLGLKKKEAYGWLHAGKIYHLLGH
NELVDLYVQVAQEVALKIGDTSFILKFLETAGDIFLNSCRDRDKAITFYRERALPMAIKQ
SSSVHTTLRLCNKLTVVMFSLNLYKEALEFAQMALDLSISQGEHLNQRVAYHRLASLYHR
LEQYELAEHYYLKTLTHCPTPMQFDEETLYYVRVYQVLGDMIFYDMKDPFDAAGYYHLAL
AAAMDLGNKHAQLQLCTRLATIYHNFLNDRDLSLFFYQKARAFAAELHVRRTDISLFKQY
SSTSVCTIKEEQK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaagaagcgagctgtgccactgctgttgaatgttgtcaggggtcccgagcgc
cttcctgcaactcaacaatatcaggaaacactgctgaggaaactacacactttacagagt
gacagcaccaaggtcaacactttgtttgcggaactgtgtgctcatgtcacctccatcaac
agtgaagaaaaagttattatcatcggctttgaaaactttgaggaaatatggaagttttgc
acgtattatagagtaggttttgtgggtcattgtctggaacatttgctgcttgacgaccaa
ctgtggcttgaatctttcgaagaggacattgcaattgacgtgtctattccagaggaaaca
ctaaaccgtgtctatacaggcctcctcatgcaagaaggttcattgtttgcctacagtagt
gccaaccaaatgtttgacagctccacctctggtagggacatctatctggagcagggagac
ttggcccaatttgagcctccctttctcgattcgggttggaccgtccgcagcctgtctgat
ggaacccgcggcacagccccgaatccagctctgaaaccagttgatccttttcatcaatgg
ttccttaaatcctgtgctgaggcagttttaattggagaatggaaagctgagataacctgt
cccctgcagtttgctcatggaacatgtttagccaccgtggagtatgatgctgaaggtcca
tttgagctgagccttgcacagggcaatcttattgttattgtggggcacatgatttctggt
tttgactggttcattggcaggaaagaaatgacaggggaagtgggtctggtaaagacgagc
catgttaaaccaactactgacagtgttgagacaacagatgttttcctggagaacaacgag
gggatgtttcccaacccacaacaggacgacatcaaaaagaaggcagtggccatattgaag
aagaaatctcaaaacaatgctgcttgtgattataaactagataaagttaattacactgat
tttgagaagaaccagtcaggcactacctcacataaagctgatactcagcggattgaagga
ctgagagaaaaaatgcagacaatactaaaacaaccaaagagttgcttatcagatattact
tcagctgatataagtctgaaggactcagtcatgcttactgagccggaaacaatccctcca
tgtttcactgttcacccgattctagaggaaaacaacagtaacagtaagattttagctcct
cttttgtcatttctggatggagcagactgcaaagtggagtttggtctcctataccaactt
aacccagaagtcctcacttcctctatattctgcggtcactcctgcgaggatgagctcatt
tcctttctgtctgttggaagggaaatggccagaaggaaaaaaatcctgtggtcacagact
cgcctgtgctttttattgggtaaaatctgtgcaggaaggtccaagttcagccaggccagg
gtttattttgaagagactctcagggttccgcaagaatgcttccgggattttaagcttttg
gctagcacctactacaacttggctactgtatatctgttgcaaaagaatatggaaagcttt
tcggcgctgatggagaggcttgttgccttgataatgggaattcctacgtgcctggagtgt
ctgaaggacactttagttcttcaatacttccttaagaaggcagtcttttataacaacaaa
accgctgaggcccgggcctgctgtctgctggcaaagcaccactggacttgtgctgagaaa
gtagtcccatatcttgagaggctacttgtcctcggtgctgaatctgagctaccatggaat
gtctctcttagtcaaggatacctgaccctagcacatttttaccaggaacttggccttctc
cacctcagcacctcttcagcaaggaaagcttctcagcaaccgactactgcacttagtgac
tgtcttgacagtatgattctagtcctggaaaatgtggataagctacatggtacaatccaa
caggcattcattccatcacaagcacttccatttttatacaaagccctgtctttcgcgctg
actgaacaggaagggggcagcaacaaccacgttctgagccatcagcttgcgttttgtctg
agcaagcagttttataagcacagaatgtttgatcgcgccatcgaccacatgaatgttctt
tgtagggacggcttaccattataccaaatcccagtgtctgaaacagaaagcaacaacgtc
cttctgtggatggcatggttacatattgacaacaaccagcccagtcttgccttggatata
ttggacttggtcctatcttccattccagaacactgcacaacacctcaagaaggtgtgatc
cttaacctgcaaggtgtggcactgtgcaacttgggttacctgcggaaggcggcggagagc
tatcaggcagctgttgacatctgccaagagtacgaggatctggcaaactgggccgtggct
cagggaaacctgggcttgttgtctctaaaggctggggccaaaaagctggcagagagacat
ctaactgaggctgtgcagctcttttcagagctggagggagaaggccatgaggcaaacttc
atcggcgtgttgctcgaactgggtcggcattttgtgaagcagagggagattcaccatggg
aaagggtgttatgagtgggctctgctgctggctgtcaaagcaaacctttttgactgtcag
ctttctgcaaccaggattctatgtcatctgtacaaatacgattgtccggatcagactcgg
tgtatcatctacaatgaataccaaatccatttgctgagacacttaaaagaccaaatacag
gagagtgaagtactggaaatcctgagtgagatctaccttaacctgggaacagaaagagca
taccgagcagctcttgattgtacgaaaagctccttgggtatcttcatcgacctgggcctt
aagaagaaggaggcatatggatggctgcatgctgggaagatttatcacctgttgggacat
aatgaactggtggacctttatgttcaggttgctcaggaagttgccctgaaaataggagac
accagcttcatcttgaagtttctggaaaccgcaggagatattttcttgaacagctgcaga
gacagggataaggccataaccttctacagggagcgtgcgctgcccatggcaataaagcag
agcagcagtgttcacaccacactcagactgtgtaataaactgaccgtggtgatgttcagt
ctgaatctgtataaggaagctcttgagtttgcacagatggcactggatctcagtatcagt
caaggtgagcatctgaaccaacgagtggcctaccatcgccttgcatctctctaccaccgt
ctggagcaatatgaacttgctgaacactattacctaaagacactgacacactgtccaaca
cctatgcagtttgatgaggaaacgctctactatgtcagggtttaccaagtcctcggagac
atgatattctacgacatgaaggatccgtttgatgctgcaggctactaccacctagctctg
gctgcagctatggaccttggaaacaagcatgctcagctgcagctctgcacacgcctggcc
accatctatcacaactttctcaacgatagagacctgtcgctcttcttttaccagaaggca
agagcatttgccgcagagctgcatgtcagaaggactgacatttcactattcaagcagtac
agcagcacgtcagtgtgtacaatcaaggaggaacagaagtaa
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