Cynoglossus semilaevis (tongue sole): 103391949
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Entry
103391949 CDS
T04866
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
103391949 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103391949 (lmo7)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103391949 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
STAT2_C
Motif
Other DBs
NCBI-GeneID:
103391949
NCBI-ProteinID:
XP_016895267
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All DBs
Position
16:complement(8169627..8228042)
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AA seq
1500 aa
AA seq
DB search
MEWREQSAVGCQEAFMEAQRWIEAVTKKNFGSQDFRSALENGVLLCDLVNRIRPGLIKRV
NRLPTPIAGLDNLNVFLRACGRLGLKEAQLFHPGDLQDLSTRVTVKDQETDRRLKNVLIT
IYWLGRRAQCDSFYDGPYLNFKAFEGLLGTALYKALHESATQKGSSVRDSGFGDSWYSER
EEICQLREVGGEGGRSSCSSGGSGSGHRRDDSLDSLDSLGSRPHSISSDTTLKGSSEGCC
SDPEADSEHRMADSKDNISYRRSAVIAPKTTTQFNQFLPTKDKSSGYIPPPLRKKRAERN
EDNRRSWANPIYTEEDGTLTRNNQTEESTDDGSKSTSDLPVNPSILRQLSYEEMEKFREQ
QKANDDVWEDALSKWKTRRKSVNSDIVKKKEEREKIEQITFGNSRRSKTFKEMQEERESK
ATGSRLASLSYTDNDDVFERPVISPRTRTLPARSYTIDTSYFSSEPSLKEEEPPTAAPAR
GRAASPQPTQTVNAVDSRTETNITTTTNTSITPGLITSTRRSQLAAAAPPERRLLSEDKK
TTRTEEVTKIVTDSFSSVQRVSEPRRSMWAKQTELEAPSSGAFSKQQQQIKPSPPLSSME
AKPPAVSQVSASLPRSYQRSDSARITSVIAPKPFGTQSSRLSSLSRASTMDDSYKRVNGD
VNTSKKTSVPSRYHAFMTSEDEAQSSSAHSSEDEEEEEEEQQQWNGSGVKSVTSTQTVVS
TQSVKSAAPVTAAPDTQNKQENCCEMRISLNQKPNSSKDFGFVAAWDSTGAQVTSVQPGS
QAAMCQLQVGDEVLSVNKQQVADMSYTDWKNCMEAALQEGSLVMDILHHGPNNWDKALPS
PPFKSHKTINLTSMDHPILLGSPEILTTKPSLDFTSRISTETLQPKELSAKPAVDLASNG
VNANFYEQSVTMRNKESEPISLKNLKRRSEFFEQGGPETTVPDIPVPSLTHSSSRWSWDP
EEERKRQEKWQKEQERVLQEKYKRDQEKLQEEWQKAQEEISKSEDHQEFTRKNSQMSRLQ
PSVSTLWEEEERRRKQEEQEVLRRMEERRIREEEERERLRQEEEERRLRREMEEKREHQR
QEEERRRREEEEQELQRLQEEKKRKEEEERKRKEEEERKRMEEEVRKRKEKEERMRREAQ
AEELRWQRRREEEKKRQEALEQLRREREKAFQQQEQWSAGYRVQPTLSYTDRAKSKSSPQ
LDEEDRPQRRGVHVQTGGMAHWLLEEQLKIAADREAQSQRAASELELERRNILNAMRYRE
PERVSSGGFDEKKSLSQAELERQQILNEMKKKTSLLTDNSWIRQSSCSTTYSKETDIPPM
RRGESLDNLDRHSWRSSWTPRSNSYAPSYSRPHSALSGSASFYSSTGGGPGLQGPKSSTL
PPFYSMGFLQGGAGTHSTPWSQQMSPPLSPERLSESGLQQRNRSVSGKKVCTFCDTPLGK
GAAMIIESLGLCYHLSCFKCIDCKSDLGGSEAGAEVRIRNKQLYCNSCYMRFKTGQPTEM
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagagaacagtctgcggtcggctgccaagaagccttcatggaggcgcagcgg
tggatagaggcagtaaccaagaaaaattttgggagccaggacttccgatcagcgttggaa
aacggcgttctcctgtgcgatctagtcaacagaatcaggcctggactcatcaagagggtg
aaccgacttcctacacctatcgctggactggacaacctcaacgtcttcctcagggcctgc
gggagacttggactaaaggaagctcagctctttcaccccggtgatcttcaggacttgtcc
acgagagtcacagtcaaggatcaggagactgacaggaggctgaaaaatgtgctgatcact
atttactggcttggcagaagagctcagtgtgacagtttctatgatgggccttacctgaac
ttcaaggcctttgagggattattagggacagcactgtacaaggctctgcacgagtcggcc
actcagaaaggcagcagtgtccgagacagtggttttggtgatagttggtactcagagcga
gaggagatctgccagctcagagaagtaggaggagaaggaggacggagcagctgcagcagc
ggtggcagcggcagtggacacaggagagacgactccctggacagtttggactctttaggt
tccagacctcacagtatctcctctgataccactcttaaaggcagcagtgagggctgttgc
agtgacccggaagcagactctgaacacaggatggctgacagcaaggacaacatcagttac
cgccgctcggccgtcatcgcacccaagaccaccacccagttcaaccagttcctgcccacc
aaagacaaatcgtcagggtacatccctcctcctctgaggaagaaacgggccgaacgaaat
gaggataatcggcgcagttgggcaaatcccatctacactgaggaggacgggaccctcacc
agaaacaaccaaactgaggagagtacggacgatgggagtaaatccaccagtgacctccct
gttaatccatccatcttacggcagctcagctacgaagagatggagaagttccgtgagcag
cagaaggcaaatgatgatgtctgggaggatgccttgagcaaatggaagaccaggcgcaag
agcgtcaactctgacattgtgaagaagaaagaggagcgtgagaagatagagcagatcact
tttggcaacagcagaaggtctaagaccttcaaggagatgcaagaggagagagaaagtaaa
gccacaggcagtcgtcttgcatcgctctcttacacagacaacgacgacgtatttgagaga
cctgtcatctcccctcgcacccgaacccttcctgcaaggagctacactattgacacttcc
tacttttcttctgagccttcgctgaaagaagaggaacctcctacggctgctccagctcgt
ggccgcgctgcttctcctcagcctacacagacagtgaacgctgtagacagtcgtacagag
accaacatcaccacaacaaccaacacttccatcactccaggcctcatcacctccacccgc
aggtctcagcttgctgcagctgcaccccctgaaaggaggctactctctgaagataagaaa
acaaccaggaccgaggaggtgaccaagatagtcaccgactcctttagctccgtgcagagg
gtttcagagcccaggcgctcaatgtgggccaagcagaccgagctggaggccccctcttct
ggtgctttttctaaacaacagcaacaaataaagccttctccccctctcagctccatggaa
gccaaacctcctgcagtgtctcaggtttctgcctccctccccaggagctaccagagatca
gatagcgcacgtataacctcagtcatcgcaccaaagccttttgggacccagtccagtcgg
ctcagctcactttcccgagcctctaccatggatgattcctacaagcgagtcaacggtgac
gtgaacacttccaaaaagacatcggttccgagtcgctaccatgcattcatgacctctgag
gacgaggcccagtccagctcagcccacagcagtgaggatgaagaggaggaggaggaagag
cagcagcagtggaatgggagcggagtgaagagtgtcacctccacgcagactgtggtctcc
actcagagcgtcaagagtgcagctccagtcactgctgctccagacacacaaaacaaacag
gagaactgctgtgagatgcggatcagcctgaaccagaagccaaacagcagcaaagacttt
ggcttcgtggcagcctgggactcgactggagctcaagtcacatctgtacagccaggcagt
caggctgccatgtgccagctccaggttggtgatgaggttttgtcagtgaacaaacagcag
gtggcagacatgagctacacagactggaagaactgcatggaggcagctctgcaggagggc
agtctggtcatggacatcctccaccatggcccaaacaactgggacaaagctctaccttcc
ccaccatttaaaagccataagaccatcaatctgaccagtatggatcatccaatacttcta
ggttcccctgaaatcctcaccacaaagcccagtctggattttacctcacggatttccaca
gaaactctgcagcccaaagagctctctgctaagccagcagtggacttggcatcaaatgga
gtcaatgcaaatttctatgagcagtcggtcaccatgaggaacaaagagtcagaacccata
tctttgaaaaacttaaaacggaggtcagagttttttgaacaaggaggaccagagacaaca
gtgccagatatccctgttccttcactcactcactcctccagccgctggtcctgggaccca
gaggaggaacgcaagagacaagaaaaatggcagaaagaacaggaacgcgttctacaggag
aaatataagcgtgatcaggagaaactgcaggaggagtggcagaaggcccaggaggagatt
tcaaaaagtgaagaccaccaagagttcacaaggaaaaacagccaaatgtctcgactccaa
ccatcagtttctactctgtgggaagaggaggagagaaggagaaagcaggaagagcaagag
gtcctcaggaggatggaggagagaaggatacgtgaggaggaggagagagagcgcctgcgg
caagaagaggaggagaggagactaaggagggaaatggaggaaaagagagagcaccagagg
caggaggaagagaggagaagaagggaagaggaggaacaagagctgcagcggctccaagag
gagaaaaagaggaaggaggaggaggagaggaagagaaaggaagaggaagagagaaagagg
atggaggaggaggtgaggaaaagaaaggaaaaggaggagagaatgagaagggaggcacag
gcggaagagctgaggtggcagaggcgcagggaggaggagaagaagcggcaggaggcgctg
gagcagctgcgcagggagagggagaaggccttccagcagcaggagcagtggtctgctggc
taccgcgtccagcccacactgtcctacacagacagggccaaatccaaatcctcaccacag
ctggacgaagaagacagacctcagagaagaggtgtgcatgtgcagactggtggcatggct
cactggctgcttgaggagcagctgaaaatagctgctgacagggaggcgcagagtcagaga
gctgcctcggagctggagcttgagaggcgaaacatcctcaatgccatgagatacagagag
ccagagagagtgagcagtggtggctttgatgaaaagaagagtctgtcgcaggccgagctg
gagcgtcagcagatcctgaatgaaatgaagaagaaaacatcgctgctcacagacaacagc
tggattcgccagtcctcgtgcagcaccacctacagcaaagagaccgacattccacccatg
cgcagaggtgagtctcttgacaacttggacagacactcctggcgttcgtcgtggacacca
aggagcaactcatatgcccccagctacagccggccccactctgccctttctggaagcgcc
tccttttacagtagtactggtggtggaccaggactacaggggcccaaatcctccaccctg
ccccctttttattccatgggctttctccaaggtggggcaggaacccactccacaccctgg
tcccaacagatgtctcctcctttgtctccagagcgtttgtctgagtcagggcttcagcag
aggaacaggtcagtgagtggaaagaaagtgtgtacattctgtgacactccactgggaaag
ggagcggccatgatcatcgagtccctggggctctgttatcatttgagctgttttaagtgt
attgactgtaaatctgacctcggaggatcagaagctggagctgaagtcaggatacggaac
aaacagctctactgtaactcctgctacatgcgatttaaaactggccagccaacagagatg
tga
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