Cynoglossus semilaevis (tongue sole): 103391959
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Entry
103391959 CDS
T04866
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103391959 (ift88)
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103391959 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_8
TPR_6
TPR_14
TPR_7
TPR_16
ANAPC3
TPR_11
SNAP
TPR_17
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
DUF2225
MIT
TPR_10
ARM_TT21_4th
ARM_TT21_C
TPR_15
HEAT_Nup120
TPR_MalT
ARM_TT21_N
HAT_PRP39_C
ARM_TT21
DUF6584
DUF2989
Coatomer_E
Consortin_N
NatA_aux_su
ARM_TT21_2nd
SHPRH_helical-1st
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
103391959
NCBI-ProteinID:
XP_008326671
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All DBs
Position
16:8866988..8883351
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AA seq
826 aa
AA seq
DB search
MENVHLAPDEDDLYSGYNDYNPAFDSEELDNDAGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPLATSFGPRTSMTSSMGRPMTGAVLDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSRGP
APPLELKTEDTPEEKIKILEKKVNDLIEESSMAQSMGALQLALEKAKEAGRKERALVRQR
EQSGNGDHINLDLTYSVLLNLANQYENNEMYPEALNSYQVIVKNKMFSNAGRLKVNMANI
YFQQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFIRMGQYSDAITSFSHIMGES
PNIKTGFNLILCYYAIGDREMMKKAFQNLISVPLGIDDEDKYIPSNDDPSSNMVVEAIKN
DKLHQMERNLKSLTEKYIMTAAKLIAPAIETSFAAGFDWCVDMVKGSQYVELANDLEINK
AITYLRQKDFNQIEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYSDLAMNA
DRYNPAALINKGNTVFVRQDYEKAAEFYKEALRNDSSCTEALYNLGLCYKKLSRLDEALD
CFLKLHAILRNSAQVMYQLAQIYELLEDPQQAIEWLMQVISVIPTDPKILAKLGELHDAE
GDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALGTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATRLKKVEKM
KEIREQRVKSGREGSARGRREGRDGSAGSADSSHSSSSAKGERLSAKMRSLPASNEPYET
SSPKELDASYVDPLGPQMERPKTGAKRRVEEDDFADEELGDDLLPE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgcatttagctccggacgaagatgatctttactccggttacaacgactat
aatcccgcatttgactccgaggagttggataatgatgcaggatttcagcaagcagtgagg
acaagtcatggaagaagacctcctatgacggccaagtttcctggcacagctattggagct
cgtcctcttgctacttcatttggtcctcggacttctatgacctcatcaatgggcagacca
atgactggagctgtgctggatggagctgcccgacccatgaccgcagtcagagctgcaggt
tacacatcatcactgacccgtggttcaacctttgaccctttgggtcagtccagaggccct
gctcctcctttggaattaaagactgaggatacgcctgaggagaagatcaaaatcctggaa
aaaaaagtaaatgacctaatagaagagagttccatggcacagagcatgggagccctgcag
ctggctcttgaaaaagcaaaagaagcggggaggaaggagagagctctggtgaggcagaga
gaacagtctggaaatggagaccacatcaatttagatctcacttactctgttttgctgaac
ctggccaaccagtacgagaacaatgaaatgtacccagaggctctgaacagttaccaggtc
atagtaaagaacaagatgttcagcaatgcaggccggctcaaagtcaacatggccaacatc
tacttccaacagaaaaactaccccaaagccatcaagttctaccgcatggccctggaccag
atctccaatgctcacaaggagatgaggatcaagatcatgcagaacattggtgtggttttc
atacgtatgggccagtattcagatgccattacgtccttcagtcacatcatgggcgagagc
cccaacattaagactggcttcaacctcattctgtgctactacgccatcggagacagagag
atgatgaagaaggcctttcagaacctcatctctgtccctctgggaatcgatgacgaggac
aagtacatcccatccaacgacgaccccagttcaaacatggtggttgaagccattaagaac
gacaagcttcaccagatggagagaaatctaaaatccctgactgaaaaatacatcatgacg
gctgccaagctcattgctcctgctattgaaacttcatttgctgctggattcgactggtgt
gtggacatggtgaaaggttcccagtatgttgaactggccaacgatctggagatcaacaaa
gccatcacctacctcagacagaaggacttcaaccaaattgaggcagtagaaaccttgaaa
acgtttgagaagaaggacagcagagtgaagagtgcggcagccaccaacctctctttcctt
tacttcctggagaaggactatgaccaggctgaccgttattctgatctggccatgaacgca
gaccgctacaatccagccgctctgatcaacaagggcaacacggtgtttgtcagacaggac
tacgagaaggcagcagagttctacaaagaggctctgaggaacgactcctcctgcactgag
gccctgtacaacctcgggctgtgctataagaaactcagccgtctggacgaggctctggac
tgtttcctcaagctccatgctattctgaggaacagtgctcaggtcatgtaccagctggcc
caaatctatgaactcctggaggatccccaacaggccattgagtggttgatgcaggtgatc
agtgtgatccccactgaccctaagatactggccaaactgggagagttacatgacgcagag
ggcgacaagtcccaggcgtttcagtactactatgagtccttcaggtattttccgtctaac
attgatgtgatcgagtggctgggggcctactacatcgagactcagttctgcgaaaaagcc
attcagtattttgagagagctacactcatacaaccaacacaggtgaagtggcagctgatg
gtagcgagctgctacagaaggagtggaaactaccagaaagctttgggcacgtataaagac
atccaccgcaagtttccagagaatgttgaatgtctgcgatttctggtgaggctatgcaca
gacataggcctgaaggaagtccaggaatacgccaccagactgaagaaggtggagaagatg
aaggaaatcagagaacagagagtgaaatcagggcgagagggcagcgccagaggtcgcaga
gaaggcagagatgggagcgctgggagtgcagacagcagccacagcagcagcagtgctaaa
ggggagcgactcagcgccaagatgcgatcacttcctgcctccaacgagccctacgagacc
agcagcccgaaagagctggacgcatcctacgtggacccactgggacctcagatggaaaga
ccaaagacgggagccaagagacgcgtggaagaggacgattttgcagatgaagagttggga
gacgacctgctgccggagtag
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