Cynoglossus semilaevis (tongue sole): 103391964
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Entry
103391964 CDS
T04866
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103391964 (ttf2)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103391964 (ttf2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
103391964
NCBI-ProteinID:
XP_008326682
UniProt:
A0A3P8VKC4
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Position
16:8787676..8795898
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AA seq
1116 aa
AA seq
DB search
MEKVICTEHGCVCMLKTGVKEGPTKGKSFYVCVNKQGCDFSQIASIPPSHCLHHEDSMVE
LQALTYSSQQQCYRLFYRCIVGKKAGQRWCGNVPWTGVDKKQKIPADTKAQPSSLSPVRN
PFKASEKVDKSKVKQSSEGDVTDSQKSHKNEARKSDRKELEESTGGEAEEDKENGKKLNL
ADTYRGKPLPAGMKMKKRLSDEERDASKANNVAKTAEEVKSKLGETQPDKESKTPHVTYK
DSHQQPAPTKSCAVDQKQTVEKELSSKDTRGSTESYCGSAKATSDQQGHCDDKNSEDDDD
VVLVSVKPAAQTTSPASAVQKTITTFPGFQTASKVKGQQPDPRGLRNLLTAQLEQKKTTL
SVVNTAALPDKGQRLKTQVRELEEALESLSLSAASQTGSQDEADSSAPHPANGHAINPFS
RQGGTILLPAAPTAGPSHNQASSSSMGLQLSQGLTQTYGVNPQVQAFYGGRMTNDRLLAV
KNATSEAIDHLHNSLESCPDAEAESPDPRGIKVTLLAHQRRALAWLLWREAQKPCGGILA
DDMGLGKTLTMISLILHQKKKAKVEDEKKEEKKLDKWLSKTDPSVVASKGTLIICPASLV
HHWKKEIERHVKSGRLTVYLYHGPNRERSARALADYDVVVTTYGLVSKEIPVPKEETQKP
SECSDEAPKTSSSSPLMRVTWARVILDEAHNIKNPKVQTSQAVCQLRACARWAVTGTPIQ
NNLLDMYSLLKFLRCSPFDEFKLWKAQVDNGSKRGRERLNILTRTLLLRRTKDQKDSTGN
PLVVLPDRTCEVHRLKLSKDEKAVYDVVFAQSKSTLQNYLKRHEGNDVSKGSKSSNPFDK
VAQEFGLSQPDSAVSSSQQASSTVHILSLLLRLRQCCCHLSLLKKTLDSSELQADGVVLS
LEEQLNALSLSSGSSSSDPDPKDSVALNGTRFSAQLFEEGRESTKISSMVSELKAIRQKS
DDQKSVIVSQWTSMLQIVALHLEQMGLRYGVIDGSVNPKRRMDLVEEFNTNPKGPEVMLV
SLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQRKDVTIHRFVCEDTVEEKI
STLQEKKKELAQNVLSGTGSTFTKLSLADLRIIFGV
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtaatttgtactgaacacggttgcgtgtgcatgttgaaaaccggtgtaaaa
gaagggccgaccaagggcaaaagcttctacgtctgcgttaacaaacagggatgtgacttt
agtcaaattgccagcattccaccgtcccactgcctgcatcatgaggactcaatggtagaa
ctacaggctcttacctacagttcacagcagcagtgttacagattattctaccggtgcatt
gtgggtaaaaaagcaggacagagatggtgtggaaatgtgccatggactggagtagacaaa
aagcaaaaaataccagctgacactaaggctcagccatccagcctctcacctgtcagaaac
ccctttaaggcctcagaaaaagtggacaagtcaaaggtgaagcagtctagtgaaggagat
gtaacagacagtcagaaaagtcacaagaatgaagcaagaaaaagtgatcggaaggagctg
gaggagagtacaggaggcgaagcagaagaagacaaagagaatggtaaaaagctgaattta
gcagacacttacaggggcaaaccacttcctgcaggtatgaaaatgaaaaagaggttgtca
gatgaggagagagacgcttctaaagccaacaatgtggctaaaactgcagaggaggtaaaa
agtaagctgggggaaactcaacctgataaagaaagtaagacaccacatgtgacttacaag
gactcacaccaacaaccagctcccactaaaagctgtgcggtggatcaaaaacagaccgtc
gaaaaagaactctcttctaaagatacaaggggcagcactgagagttattgtggctccgct
aaagccacatctgatcaacaaggccactgcgatgacaagaattccgaggatgatgatgat
gttgtcttggtgtcagtaaaacctgctgctcagacaacatcccctgcttctgctgtgcaa
aaaaccatcacgactttcccaggatttcagactgcatctaaggtcaaaggtcaacagcca
gatcctagaggcctgaggaatctgctcactgctcagctggagcagaagaagaccactctg
tctgtggtgaacacggctgctctgccagataaaggtcagaggctgaaaacacaggtcagg
gagctggaggaggcgctggagtccctgagtctcagtgctgcttcacagacggggtctcag
gatgaagcagacagcagtgcccctcatccagctaacggtcacgcgatcaacccgttcagt
cgacaaggcggcaccatcctgctgcctgctgcgcccactgctggcccctcccacaaccaa
gcgtccagcagctctatgggacttcagctaagtcagggtttgacccagacgtatggagta
aacccacaggttcaggccttctatggtggcagaatgactaacgaccgtctgctggcggtg
aaaaatgccaccagcgaggccatcgaccacttgcacaactctttagagtcctgtcccgat
gctgaggccgaatctccagaccccaggggcattaaggtgacactcctggcccatcagagg
agagctctggcctggctgctctggagagaagctcagaaaccctgtggaggaattctagct
gatgacatgggtctgggaaaaaccctgaccatgatttccctcatactacaccagaagaaa
aaggcaaaagtggaagatgaaaagaaggaggagaaaaagctggataagtggctctccaaa
actgaccccagtgtggttgcatccaaaggaactctcatcatctgtcctgcctctctggtc
caccactggaagaaggaaatcgagcgacacgtgaagagcggcagactgacggtgtatctg
tatcatggtccaaacagagaacgcagcgctagagcactggctgattatgacgtagtggtg
accacgtacggtttggtctccaaagagatcccagtcccaaaggaggagacacaaaaaccc
tctgaatgttctgatgaagcgccaaaaacctcctcctcttctcctctaatgcgagtgacc
tgggctcgtgtgattctggacgaagcccacaacatcaaaaaccctaaagtgcagacgtca
caggcggtgtgtcaactgagggcgtgtgctcggtgggcagtcaccggtacgcccatccag
aacaacctgctggacatgtactcgctgctgaagttcctgcgctgttctccgtttgacgag
ttcaagctgtggaaagctcaggtggacaacggatcaaaaagaggcagagagagactgaac
atcctgaccaggactctgctgctgagaagaaccaaagaccaaaaggattcaactggaaac
cctctggtggttcttcccgatcgcacctgtgaagtgcatcgactcaaactgtccaaagac
gaaaaggcagtgtacgatgtcgtcttcgcccagtcaaaatccactctgcagaactaccta
aagagacatgaaggaaacgatgtcagcaaaggaagcaagtcttcaaatccttttgataaa
gtagcccaggagtttggtttgtctcaacctgattctgccgtgtccagctcccagcaggca
tcgagcaccgtccacatcctgtccctgctgctgcgcttgagacagtgctgctgccatctg
tccctcctgaagaagactctcgattcttcagagctccaggctgatggcgtcgtcctgtct
ctggaggaacagctcaacgccctgtctctgtcctcaggctcctcgtcctcagaccctgat
cctaaagactctgtggccctgaacggcacccgcttctccgcccagctgtttgaagagggc
agggagagcaccaagatttcctctatggtctctgagctgaaggccatcagacagaagagc
gacgatcaaaaaagcgtgattgtgtctcagtggaccagcatgttgcaaatcgttgccctt
cacctggagcagatgggcttgagatacggcgtcatcgacggcagtgtcaaccccaaacgt
cgcatggacctggtggaagaattcaacaccaacccgaagggaccagaggtaatgctggtg
tctctctgtgctggaggagttggactcaacctgattggtggaaatcacctctttctcatc
gacatgcactggaatccagccttagaggatcaggcttgtgaccgaatttacagagtcgga
caaaggaaagatgtcactatccacaggtttgtgtgtgaagacacagtggaggagaagatt
tccacactgcaggagaagaaaaaggagttggcccaaaatgttctgtcaggaacaggaagc
accttcaccaagctgtcgttggctgacctcagaatcatttttggcgtctaa
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