Cynoglossus semilaevis (tongue sole): 103392028
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Entry
103392028 CDS
T04866
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X2
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103392028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103392028
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103392028
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103392028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
PRY
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
103392028
NCBI-ProteinID:
XP_008326770
UniProt:
A0A3P8VJX4
LinkDB
All DBs
Position
16:complement(9850818..9892884)
Genome browser
AA seq
669 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPVQSINAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKVSLSGPNSPSETRRERAAPDSKAMTSPGIRVQ
CQFCEQDPPLDAVKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALGDRYDKLKQALDSNLSNLIKRTSELE
SLMGKLIQTCQNVEVNASRQENKLLEECELLINIVQQRRQVIATKIKEGKSVRMRKLAQQ
IASCKQCIERSSSLITQADQTLKETDHTRFLQTAKNTCERVSMATASSQILIPEINLNDT
FDSFVLDFTREKKMLEGLDYLTAPNPPAIREELCTASYDTITVHWTTDDEFSVITYELQY
AIFTSHSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYIFIVKAINQAGNRSSEPGK
LKTNSQPFKLDSKSAHRKLRISHDNLTVERDESLSKKSHSQDRFSSHSSYGVTGNVYIDS
GRHYWEVLIGGSTWFAVGITYKSAPKHEWIGKNSASWVISRCNNSWVVRHNSKEMTVEPS
PHLRRLGVLLDYDSGSLSFYDAVSSQHLYTFDIAFAQPICPVFNVWNRCLTILTGLPIPD
HLEGTEFNN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatttgtctagagctatttgaagacccg
ctgctcttgccctgtgcccacagcctttgtttcaactgtgcacatcgtatcctggtctcc
cactgcacccccagtgaaccagttcaatccatcaacgcctttcagtgcccaacctgccgc
tatgtcatcacactaaaccagaggggcctggagggacttaaacgcaacgtgactttacag
aacatcatcgaccgttaccagaaggtctccctcagtggaccgaattctcccagcgaaact
cggcgtgagcgcgcggctcccgacagcaaagccatgacatctcccggcatccgggtccag
tgtcagttctgcgagcaggacccgccgctggatgctgtaaagacttgcgtcacctgtgag
gtgtcgtactgcgacgagtgtctgaaggccacccaccccaacaagaagcccttcaccagc
caccgtctcattgagcccttgcttgactcccatctgcgagggcttatgtgtctggagcac
gaggatgagaaggtcaacatgtactgtgtgacagatgagcagttaatctgtgcgctgtgt
aagctggttggccgacaccgagaccaccaagtggcagccctcggagaccgttatgacaaa
ctcaagcaagccttggactccaacctcagcaatctaatcaagaggaccagtgagttggaa
agcctgatgggcaaacttatccaaacctgccagaatgtggaggtcaatgcatcacgacaa
gaaaacaagctgctggaggagtgtgaactgctgattaatatcgtacaacagcggagacaa
gtcatagccacgaagataaaggaaggaaagtctgtgcgaatgaggaaattagcccagcag
atagccagctgcaagcagtgcatcgagaggtcctcgtctctcatcactcaggctgaccag
accctgaaggagacggaccacactcgctttctgcagactgctaaaaacacctgtgagaga
gtgtcaatggccacggcctcctcccagatcttgatcccagaaattaacctgaatgacacg
tttgatagttttgttttggatttcaccagagagaagaaaatgctggaaggcctggattac
ctcactgcacctaatccaccggcaatccgtgaggaactgtgcacggcttcgtacgacacc
atcacggttcactggacgacagatgacgagttctccgtcatcacatatgaacttcagtat
gccatcttcaccagtcattctaatgtcgtcagtttatgtaactctgctgacagttggatg
attgtgccaaacatcaagcagaaccactacactgtgcatggactccagtgtggcacaaag
tacatcttcatagtgaaagcaataaaccaggctggcaaccgcagcagtgaaccagggaaa
ctcaagacaaacagtcagccattcaaattggactcaaagtctgctcaccgcaagctgagg
atatcccacgataacctgacggttgagagagatgagagtctgtctaagaagagtcacagt
caggatcgcttctccagccacagcagctacggtgtcacaggaaacgtctacatcgacagt
ggacgccattactgggaggtcctgataggaggaagcacatggtttgcagtggggatcacg
tacaagtctgcaccaaaacacgagtggattggaaagaactcagcctcctgggtaatctct
cgttgcaacaactcctgggtggtacgacataacagcaaggagatgactgttgagccttca
ccccacctgcggcgtcttggagttttgttggactacgactccggatccctgtctttctac
gacgctgtcagctctcagcacctgtatacatttgacattgcctttgctcagccgatctgc
cctgtgtttaatgtgtggaatcgatgtttgacaatcctcactggactgcccatccctgac
cacttggaggggacagagtttaataactaa
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