Cynoglossus semilaevis (tongue sole): 103392059
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Entry
103392059 CDS
T04866
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103392059 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csem03400
]
103392059 (xrcc5)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103392059 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
FPL
DUF4599
Motif
Other DBs
NCBI-GeneID:
103392059
NCBI-ProteinID:
XP_008326808
UniProt:
A0A3P8VQN3
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All DBs
Position
16:10246275..10254850
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AA seq
726 aa
AA seq
DB search
MARSRSALVLCMDVGFSMSNSAPGDESHFDLAKKIIQKFVQRQVFAETKEELALVLFGTD
STKNPLHRDDQYQNIIVHRHLMVADFELLEEIENQIHPESQQADWLDALVVCMDLLQTET
KGKKYDRLNIALLTNFSTASSSDNLDIIIGNLKKAGITLQFFLPFPLDEDEQGGEDGDSR
GPGHQGAGKGLSSEQQNALSMMKHIMLSLDEEEGLDEVYSFRNALQELHMFKRIETRPMA
WPCLLTIGSSLSIRIVGYKAVTEEKRKKTWMTIDAQSHQSEDVKKETVYCLDDDNETEVQ
KDNIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFSKRNLVQRHLFMGNQVLKIFA
AKDDEHAGIALSALIRALDELKMVAVVRYAYNRSSNPQVGAAFPFIKKNYECLMYVQLPF
TEDLRQFTFPSLENNKKVTPSETQLSAVDSLIDSMMLVEEDENGETDDLFRVHHIPNPDF
QRLFQCLHHRAVNPSAPLPPIEPWLKAALERPEVISERCRAPLEQIKKNFPLTEVEKKKP
LKTSAQIYGKDSGESDVKKAKEDVEEGEYNLADITEGSVTSVGSVDPARDFCTLVRQKSL
PFGEVCQQLTQRIEQLLSNKNTQYYMKSITCIQAFREQSVKLENAELYNSYIQSLKSSVP
SRGLEVFWDLLRQDALTLISRDEVEGSTVSKYEANQFLVAEEKEEEAMAASPAGDVGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcacggtctagatcggcgctggtgctctgcatggatgttggcttttccatgtccaac
tcagctccaggtgacgaatctcactttgatcttgcaaaaaaaataatccagaagtttgtc
caacgtcaggtttttgctgagacaaaagaggaactggctttagttctgtttggaacagat
tcaaccaaaaatcctttgcacagagatgatcagtaccagaacatcatcgtccaccgccac
ctcatggtggcagactttgaactgttggaggaaatagaaaatcaaattcacccagagagt
cagcaggctgactggctggatgctcttgttgtctgcatggatcttttgcagactgagact
aagggaaagaagtacgatcgtctcaacatcgccctcctgactaacttcagcactgcatcc
agttcagacaacttggatattatcattggaaacctgaaaaaagctggcatcactttacag
ttctttctgccatttcctttggatgaagatgagcagggtggagaggatggagacagcagg
gggccaggtcaccaaggtgcaggaaaaggtctgtccagtgaacagcaaaatgccctgagt
atgatgaaacacattatgctgagcctggatgaagaggaaggcctggatgaagtttacagc
ttcagaaatgcactgcaggagctgcacatgttcaagcgtatcgagacgagacctatggcc
tggccctgcctgctgacaattggtagttctctgtcaatccgcattgtaggatataaagca
gtaacagaagagaaacggaagaagacatggatgactattgatgctcagagccaccagagt
gaagacgtgaagaaagagacagtgtattgtctggacgatgacaacgagaccgaggtgcag
aaagacaacatcattcaaggtttccgttacggaagtgatattgtccccttctccaaagtg
gatcaggagcaaatgaagtacaaacacgatgggaagtgttttgctgttctgggcttcagc
aaaaggaacttggtgcaacgacatcttttcatgggaaaccaggtcctaaagatttttgca
gcaaaagatgacgagcatgctggaatagctctgtctgctctcatccgagccctggacgaa
ctcaaaatggtagccgtcgtacgctacgcctacaaccgaagcagtaaccctcaagttgga
gcagctttccctttcattaaaaagaactacgagtgtctcatgtacgtccagctgcccttc
acagaagacctcaggcagttcacctttccctctcttgaaaacaacaaaaaggtcacgccg
tcagaaactcagctttctgctgtggactctctcatcgactccatgatgttggtggaggaa
gatgaaaatggagaaacagacgacttgtttagggtccatcatattcccaaccctgacttc
cagaggctcttccagtgtttgcatcatcgtgcagtgaaccccagcgccccgcttcctccc
atagagccgtggctgaaggctgctctcgagcgccctgaagtcattagtgaacgctgtcga
gctccactggagcagataaagaagaattttcccctcacagaagttgagaagaagaagccg
ctgaaaaccagcgcccagatttatggcaaagactctggtgagtcagacgtcaagaaagcc
aaagaagatgtagaggagggagagtataatctggctgacatcactgaaggctccgtgacc
tctgtgggaagtgtggatccagctcgagacttctgcactctggtcaggcagaagagtctt
cccttcggagaggtctgtcagcagctgactcagaggatagagcagttgctaagcaacaag
aatacacaatactacatgaagagcatcacctgtatccaggcttttagagagcagtctgtc
aagttggagaacgccgaactgtacaacagctacatccagtccttgaaaagcagtgttcca
agcagagggctggaggtcttctgggatctgcttcgtcaagatgccctgacactgatcagc
agggatgaagttgaaggaagcaccgtgtccaaatatgaggctaatcagtttctggttgcc
gaggagaaggaggaggaggcgatggctgcatctccagctggagacgttggagacgtcgat
gacttgctggacatgatgtaa
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