Cynoglossus semilaevis (tongue sole): 103392081
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Entry
103392081 CDS
T04866
Symbol
snx4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103392081 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103392081 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103392081 (snx4)
Membrane trafficking [BR:
csem04131
]
SNARE
SNARE associated proteins
Others
103392081 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
103392081 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
103392081 (snx4)
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103392081 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
FapA
Motif
Other DBs
NCBI-GeneID:
103392081
NCBI-ProteinID:
XP_008326829
LinkDB
All DBs
Position
16:10578928..10585893
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AA seq
436 aa
AA seq
DB search
MMADSDSADVALIGNTDLTSSESENNIVNTMVEKGTALLRKIEINVPEAEKRTGKNTVNM
QETYTAYLIETRPAESLPEGSVPATPDSLWRRYSEFELLRMYLLVTYPYIIIPPLPEKRA
EFVWHKLSADNLDPDFVERRRVGLENFLLRVASHPVLSTDKIFYRFLTEEKKWKDEVLET
GFQDKADSRLKSLSAMYRVKNPDKKFTALKLYSDELSAAISQLLRVRARVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYAASIDDILEEEEHYADQLKEYLFYTDAV
RSVCRKHELIQYELETAAQDLVSKKQQKEELTTGTVRIFSLKGMTSKIFGQESQEQRESR
LAALEQSIQEGEEALKEKNKECQEFLQTAWEDIERFKEQKDRDLRDALINYAIMQITMCK
KGIQVWSNAKECFNKM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagatagtgacagcgcagacgttgctctgatcggcaacaccgatctaacttct
tctgaatcagagaacaacatcgtaaacacgatggtggaaaaaggaacagctctgttaaga
aaaattgaaattaatgttccggaggcagagaagagaacagggaagaacacggtgaatatg
caggaaacctacactgcctacctcatagaaacaagaccggctgaaagtcttccagaggga
agtgtcccggccaccccggacagtttgtggagacgctacagtgaatttgagctgctcaga
atgtacctcctggtcacttacccctacatcatcatcccacctctgccagaaaaaagggca
gagtttgtgtggcacaaactgtcagcagacaacctggacccagactttgtggagcgaagg
agggttggactggaaaacttcctcttacgggtggcatcacatcctgtcctctccacagat
aaaatattctaccgattcctcacagaggagaaaaaatggaaagatgaagttttggaaaca
ggatttcaagataaggctgattccagactcaagtcactgagtgcgatgtacagagtcaaa
aacccagacaagaaatttacagcacttaaactatacagtgatgaactgagcgctgccata
tctcagctactcagggtcagggcgagagtagcagacaggctgtatggagtttacaaggtc
catggaaactacggccgagtcttcagtgagtggagtgctatagaaaaagaaatgggtgat
ggactgcagagtgctggacaccacatggacacatatgctgcgtcgatagacgacattctg
gaggaagaagaacattatgccgatcaactgaaagaatacctcttctacaccgacgccgtc
aggtcagtgtgtaggaaacatgagttgatccagtacgagctggagacagcagctcaggac
ctcgtcagcaaaaaacaacagaaggaagagctgaccaccgggacggtacgaatcttttcc
ctgaaggggatgaccagtaaaatatttggccaggagagccaggagcagagggagagcagg
ttggcagcactagagcagagtatacaggagggagaggaggcactgaaggagaaaaacaaa
gagtgccaggaatttttgcaaacagcctgggaagacattgaacggttcaaggagcaaaag
gacagagatttacgagacgcactaatcaattatgccatcatgcagatcactatgtgtaag
aagggaatccaggtgtggtcaaatgccaaggagtgtttcaacaaaatgtga
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