KEGG   Cynoglossus semilaevis (tongue sole): 103392136
Entry
103392136         CDS       T04866                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103392136 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103392136 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103392136 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103392136 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:csem00536]
    103392136 (col4a2)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103392136 (col4a2)
Glycosaminoglycan binding proteins [BR:csem00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103392136 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103392136
NCBI-ProteinID: XP_008326907
LinkDB
Position
16:complement(10748826..10793892)
AA seq 1669 aa
MRGTMQGQQNRGLTTLRLLLLLLCLSLTILTSGVEAGGKKHSGPCGGRDCSGGCKCFPEK
GARGQHGPLGPQGIQGPLGKKGDSGIQGHKGHKGDSGQHGVIGPKGSVVNFGSMFTLQGH
PGQAGPRGKPGADGCNGTKGEPGFPGQPGFHGPSGFPGQIGRKGDKGDSLELSVYMERFR
GDSGTPGSHGIYGPPGNPGWPGNRGTMGPKGPPGPPGPPGPKGTNAKVIKGNKGEQGDTG
PPGLPGNSTHPHTLPPQGPTGEKGQKGDRGDHAENVGEIGVMGPPGPRGTFGLDGPPGPR
GDPGEDGLIGRVGPKGAIGEPGLLISSGWPFGQSGGQSGPPGEPGPDGDRGPIGDQGPPG
SPGRPASASQVQVFELFGPFGFPGEKGDKGLQGEPGIPAVTAGPPGANGRPGARGPPGPE
GTWLEFFKGAPGVRGRPGNAGFKGPKGEHGECECSIVHSPSGPPGPVGERGDAGMSGEFG
QEGDVGDPGVPGDEGFPGSPGISGLPGPKGQKGYSSVANQKGYPGDQGQPGLDGQPGSQG
APGLNGVPGLPGSRGLPGEGLWGQRGEKGFPGLPGRPGVPGVTGDPGLVLGALKGQRGLP
GDDGLAGFPGVPGTPGSPGDCRPTADGGQVDVTGPCSADPGPPGPPGLPGPEGLPGFPGL
NGQRGPQGSLGISGEKGEVGEHGIGGQTGPPGFPGPRGDLGVPGSKGSVGNPGLPGVNGR
HGSQGEKGFHGDILGASPGPPGDPGLPGFQGNKGEQGDQGKQGYPGMGGMPGMIGYKGER
GPEGLEGEEGRPGAAGQYGYPGNPGQAGPPGPHGAFGGPGFPGERGTVGDPGPPGPIGLK
GNPGDYGSDGVIGEYGTRGNPGLPGVNGQPGLPGMKGYKGSAGMSGFEGKRGNQGVKGFG
GLKGEDGVPGQLGPKGISGHQGEKGERGLTGPPGEKPKIPLQLVFEMKGPKGNRGSKGSK
GFVGPRGEKGFPGVPGSEGYHGLPGDPSHVKGIHGDPGAQGLPGIKGMPGPTGNRGISGF
QGMKGNKGIKGGPGAYGASGETGKQGLKGDKGPQIDLLGATGLRGEDGFQGVQGHRGLKG
YPGETGAVGFDGIEGLKGESGDPGIQGPPGSVGQRGTFGNRGQQGLHGFSGKDGTRGLDG
LPGNKGFPGLKGLYGLHGLKGQKGVQGTPGLDIVGPAGESGATGEKGESGDPNSEPGFPG
TAGLKGFQGPLGDQGHPGLPGIRGSVGPDGSPYRLGSSGDPGFTGPRGLQGFPGPKGFPG
VDAPPGEKGIIGLNGFPGGPGRKGFKGDQGPYGYRGSNGVSGKKGIKGDQGVMGIPGMNG
FKGERGSVGSKGESGPPGVRGIPGNQGPPAIPVTLPGERGNPGQQGIRGPGGVIGEPGVQ
GPPGDPGFIGPSGYKGMPGISGTPGTPGFRGHNGQMGHPGLQGMEGQRGQPGIPGLPGMP
GRSVSVGYLLVKHSQSDHTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPKFN
TMPFLYCNPGDLCYYASRNDKSFWLSTTAPLPMMPVEEGEIKPYISRCSVCEAPSVAIAV
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGSEGGGQSLSSPGSCLEDFRTSPFIECNGAK
GTCHYFANKNSFWLTSVDQSFNAEPSAETLKAGQLLSRISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgagagggaccatgcaagggcaacagaacagaggactgaccactctgaggctgctgctg
ctgctcctctgcctctccctcaccatcctcacctcaggagtggaggcgggtgggaagaag
cacagcggcccctgtggaggaagagattgcagcggaggctgtaaatgtttcccagagaag
ggtgctaggggtcagcatgggcctcttggtcctcagggtatacaaggacctcttgggaaa
aagggtgattctggcatccaaggacataaaggacataaaggtgacagtggccaacatggt
gtcatcggccccaaaggcagtgtggtaaattttggttctatgttcactctgcagggccac
cctggacaagctgggcccagggggaagccaggtgcagatggctgtaacggaaccaaggga
gaacctggtttcccaggtcaacctggttttcatggcccttcaggttttcctggacaaata
ggcaggaaaggtgataagggggactcattggagctgagtgtgtacatggaacgtttcagg
ggagattcaggcactccaggaagtcatgggatatatggacctccaggaaatccaggctgg
cctggtaacagaggaactatgggaccaaaaggtcctccagggcctccaggtccacctgga
ccaaagggcaccaatgccaaagtgattaaaggaaacaaaggagaacaaggggacaccgga
ccacctggcctgccaggaaactctactcatcctcatactctgcccccccaaggacctact
ggagagaaaggccagaaaggagacagaggagaccacgcagaaaacgttggagaaattggt
gtgatgggaccccccggaccacggggcacatttggtttagatggacctcctggaccaagg
ggggatcctggtgaagatgggttaattggcagagtggggccaaagggagccatcggggag
ccaggattactgatttcatctggttggccttttggtcagtcagggggacaatctggtcca
cctggcgaaccaggtccagatggagatagaggcccaataggagatcaaggcccccctgga
agcccaggacgtcctgcctctgcttcacaagtacaagtgtttgaattatttggacccttt
ggttttccgggtgagaaaggagacaaaggccttcagggtgaaccaggaattcccgctgtc
actgcaggacctcctggagccaatggacggccaggggccagaggacctccaggacctgaa
ggaacatggcttgagtttttcaagggagctccaggtgtaagaggaagacccggcaacgct
ggctttaaaggaccaaaaggtgaacatggggagtgtgagtgcagtattgtccactctccg
tcgggaccacctggtcctgttggtgagcgtggggatgctggaatgtctggagaatttggg
caggagggtgatgtaggagaccctggtgtccccggcgatgaagggttccctggctctcct
ggaattagtgggttacctggtcctaaaggccagaaaggatactcaagtgtggccaatcag
aaaggatatcctggagatcaaggacaacctggattggatggtcagccaggttcccagggt
gctccaggcctcaatggggttcctggtctccctggtagcagaggtcttccgggagaaggt
ctctggggacaacgtggagaaaaaggttttcctggtcttcctggccgccctggtgtaccc
ggggtcacaggagaccctggcttggtactgggggctctaaaaggccagcgtggtctacct
ggtgatgatggtcttgcaggctttcctggagttcctggaacacctggcagtccaggggac
tgtagaccgactgcagatggaggacaggtggatgtaacaggtccttgcagtgcagatcca
ggacctcctggaccacctggacttccaggaccagaaggactaccaggtttcccaggactg
aatggtcaaagaggaccacaaggttcattaggaatatctggagaaaaaggagaagttgga
gagcatggaataggtggccagactggacccccaggttttcctggtcctcgtggagacctg
ggagttcctggaagcaaaggctccgttggaaaccctggtttgcctggtgttaatggacgg
cacgggtcacaaggcgagaaggggtttcacggggacatcttaggagcatcacccggaccc
cctggtgaccctggtctccctgggtttcagggtaataaaggagaacagggtgatcaagga
aagcaaggttatccaggaatgggcggcatgcctggtatgattggctataaaggagaacgt
ggacctgaaggcctggagggagaggaagggaggccgggggcagctggccaatatggctac
cctggtaatcctgggcaggcaggtccacctggacctcatggtgctttcggagggccagga
ttccctggagaaaggggcactgtgggagacccaggtcctccaggtccaattggtttaaaa
ggaaatcctggagattatggtagtgatggtgtgattggagagtatggtaccagaggtaac
ccgggactaccaggtgtaaatggacagccaggccttcctggaatgaaaggatacaagggc
tctgctggaatgtcaggttttgaggggaaaagagggaaccaaggagtgaagggctttggt
gggctcaaaggagaagatggtgtaccaggccaactgggccccaaaggaatatcaggtcac
caaggagagaaaggtgaaaggggtctgactggaccacctggggaaaaaccaaaaatccct
ttgcagcttgtgtttgaaatgaagggtccgaaggggaaccgtgggagcaaaggaagcaaa
ggatttgttggaccgagaggtgagaaaggttttcctggtgtgccgggcagtgaggggtat
cacggtttgcctggagaccccagtcatgtcaaaggaatccatggagatccaggtgcacag
gggctcccagggataaagggaatgccaggacctacagggaatcgtggaatttctggtttt
caaggaatgaaaggcaacaagggaattaaaggaggtcctggagcgtatggtgcatcggga
gagacaggaaaacagggtttgaaaggtgacaaaggtcctcagatagacctactaggagct
acgggactgaggggggaggatggttttcaaggagtgcagggccacagaggattaaaagga
tatccgggggagacgggagccgtgggttttgatggcattgaaggactgaagggagaatca
ggtgatcctggaatacaaggacccccaggctcggttgggcagaggggaacttttggtaac
cgaggtcaacagggccttcatggattttctggaaaagatggaactcgaggcttagatggg
cttccaggaaacaaaggtttccctggcttgaagggtctttatggtctacatggattaaaa
ggacaaaagggtgtccaaggaacgccaggtctggatatcgttggaccagctggagaatca
ggagccacaggagaaaaaggagagagcggtgaccccaacagtgaaccaggttttccagga
acagctggtttgaaagggttccaaggccctctaggtgatcaaggtcatcctggactgcca
gggattcgtggttcagtaggaccagatggaagcccatacagactgggatcaagtggagac
cctggctttacaggacctagaggattacaaggattccctggaccaaaaggatttcctggt
gttgatgctccacctggagaaaagggtataatcgggttgaacggatttccaggaggtccc
ggtaggaaaggattcaaaggagatcaaggtccatatggatacagggggtctaatggtgtg
tctgggaaaaaaggcataaaaggagatcaaggagtgatgggaatccctggtatgaatggt
ttcaagggagaaagaggctcagttgggtcgaaaggagagtctggaccaccaggtgttcgt
ggaatcccaggcaaccaaggtcctcctgcaatccctgtcacacttccaggggagagaggc
aatccaggtcaacagggtatccgagggccaggtggagtcataggagaacctggggtacag
ggtcctcctggtgatcctggtttcattggaccttctgggtacaaggggatgccagggatt
agtggcacaccaggaacgcctggattccgtggacacaatggacaaatgggtcatcctggt
ctgcagggcatggaaggccagcgtggccaacctgggatccctgggttacctggcatgcct
ggtcgcagcgtcagcgttggctatttactggtgaaacacagtcagtctgaccacacaccc
atgtgtcccgtgggtatgtccaaactctgggacggctacagtctgctgtacttcgagggc
caggaaaaggcccataaccaggatctgggattggctggctcctgtctgcccaagttcaac
accatgcccttcctttactgcaaccctggggacctttgttactacgccagcagaaatgac
aagtccttctggttgtcaacaactgctcctctccccatgatgcctgtggaggaaggagag
atcaaaccgtatatcagccgttgctccgtgtgcgaggctccgtcggttgccattgcagtc
cacagccaggacatcaccataccacagtgcccagcaggctggcgcagcctctggatcggc
tactccttccttatgcacacagcagctggcagcgaaggcgggggtcagtccttgtcatcc
ccaggctcttgcctggaggacttccgcacatcaccgttcattgagtgcaacggtgccaaa
ggaacatgccactactttgctaacaagaacagcttctggctgacctctgtggatcagtcc
ttcaatgctgaaccatcagcagagacacttaaagcaggccagctcttgtcacgcatcagc
cgctgccaggtctgcatgaagaacttataa

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