Cynoglossus semilaevis (tongue sole): 103392136
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Entry
103392136 CDS
T04866
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103392136 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103392136 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103392136 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103392136 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103392136 (col4a2)
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103392136 (col4a2)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103392136 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103392136
NCBI-ProteinID:
XP_008326907
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All DBs
Position
16:complement(10748826..10793892)
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AA seq
1669 aa
AA seq
DB search
MRGTMQGQQNRGLTTLRLLLLLLCLSLTILTSGVEAGGKKHSGPCGGRDCSGGCKCFPEK
GARGQHGPLGPQGIQGPLGKKGDSGIQGHKGHKGDSGQHGVIGPKGSVVNFGSMFTLQGH
PGQAGPRGKPGADGCNGTKGEPGFPGQPGFHGPSGFPGQIGRKGDKGDSLELSVYMERFR
GDSGTPGSHGIYGPPGNPGWPGNRGTMGPKGPPGPPGPPGPKGTNAKVIKGNKGEQGDTG
PPGLPGNSTHPHTLPPQGPTGEKGQKGDRGDHAENVGEIGVMGPPGPRGTFGLDGPPGPR
GDPGEDGLIGRVGPKGAIGEPGLLISSGWPFGQSGGQSGPPGEPGPDGDRGPIGDQGPPG
SPGRPASASQVQVFELFGPFGFPGEKGDKGLQGEPGIPAVTAGPPGANGRPGARGPPGPE
GTWLEFFKGAPGVRGRPGNAGFKGPKGEHGECECSIVHSPSGPPGPVGERGDAGMSGEFG
QEGDVGDPGVPGDEGFPGSPGISGLPGPKGQKGYSSVANQKGYPGDQGQPGLDGQPGSQG
APGLNGVPGLPGSRGLPGEGLWGQRGEKGFPGLPGRPGVPGVTGDPGLVLGALKGQRGLP
GDDGLAGFPGVPGTPGSPGDCRPTADGGQVDVTGPCSADPGPPGPPGLPGPEGLPGFPGL
NGQRGPQGSLGISGEKGEVGEHGIGGQTGPPGFPGPRGDLGVPGSKGSVGNPGLPGVNGR
HGSQGEKGFHGDILGASPGPPGDPGLPGFQGNKGEQGDQGKQGYPGMGGMPGMIGYKGER
GPEGLEGEEGRPGAAGQYGYPGNPGQAGPPGPHGAFGGPGFPGERGTVGDPGPPGPIGLK
GNPGDYGSDGVIGEYGTRGNPGLPGVNGQPGLPGMKGYKGSAGMSGFEGKRGNQGVKGFG
GLKGEDGVPGQLGPKGISGHQGEKGERGLTGPPGEKPKIPLQLVFEMKGPKGNRGSKGSK
GFVGPRGEKGFPGVPGSEGYHGLPGDPSHVKGIHGDPGAQGLPGIKGMPGPTGNRGISGF
QGMKGNKGIKGGPGAYGASGETGKQGLKGDKGPQIDLLGATGLRGEDGFQGVQGHRGLKG
YPGETGAVGFDGIEGLKGESGDPGIQGPPGSVGQRGTFGNRGQQGLHGFSGKDGTRGLDG
LPGNKGFPGLKGLYGLHGLKGQKGVQGTPGLDIVGPAGESGATGEKGESGDPNSEPGFPG
TAGLKGFQGPLGDQGHPGLPGIRGSVGPDGSPYRLGSSGDPGFTGPRGLQGFPGPKGFPG
VDAPPGEKGIIGLNGFPGGPGRKGFKGDQGPYGYRGSNGVSGKKGIKGDQGVMGIPGMNG
FKGERGSVGSKGESGPPGVRGIPGNQGPPAIPVTLPGERGNPGQQGIRGPGGVIGEPGVQ
GPPGDPGFIGPSGYKGMPGISGTPGTPGFRGHNGQMGHPGLQGMEGQRGQPGIPGLPGMP
GRSVSVGYLLVKHSQSDHTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPKFN
TMPFLYCNPGDLCYYASRNDKSFWLSTTAPLPMMPVEEGEIKPYISRCSVCEAPSVAIAV
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGSEGGGQSLSSPGSCLEDFRTSPFIECNGAK
GTCHYFANKNSFWLTSVDQSFNAEPSAETLKAGQLLSRISRCQVCMKNL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgagagggaccatgcaagggcaacagaacagaggactgaccactctgaggctgctgctg
ctgctcctctgcctctccctcaccatcctcacctcaggagtggaggcgggtgggaagaag
cacagcggcccctgtggaggaagagattgcagcggaggctgtaaatgtttcccagagaag
ggtgctaggggtcagcatgggcctcttggtcctcagggtatacaaggacctcttgggaaa
aagggtgattctggcatccaaggacataaaggacataaaggtgacagtggccaacatggt
gtcatcggccccaaaggcagtgtggtaaattttggttctatgttcactctgcagggccac
cctggacaagctgggcccagggggaagccaggtgcagatggctgtaacggaaccaaggga
gaacctggtttcccaggtcaacctggttttcatggcccttcaggttttcctggacaaata
ggcaggaaaggtgataagggggactcattggagctgagtgtgtacatggaacgtttcagg
ggagattcaggcactccaggaagtcatgggatatatggacctccaggaaatccaggctgg
cctggtaacagaggaactatgggaccaaaaggtcctccagggcctccaggtccacctgga
ccaaagggcaccaatgccaaagtgattaaaggaaacaaaggagaacaaggggacaccgga
ccacctggcctgccaggaaactctactcatcctcatactctgcccccccaaggacctact
ggagagaaaggccagaaaggagacagaggagaccacgcagaaaacgttggagaaattggt
gtgatgggaccccccggaccacggggcacatttggtttagatggacctcctggaccaagg
ggggatcctggtgaagatgggttaattggcagagtggggccaaagggagccatcggggag
ccaggattactgatttcatctggttggccttttggtcagtcagggggacaatctggtcca
cctggcgaaccaggtccagatggagatagaggcccaataggagatcaaggcccccctgga
agcccaggacgtcctgcctctgcttcacaagtacaagtgtttgaattatttggacccttt
ggttttccgggtgagaaaggagacaaaggccttcagggtgaaccaggaattcccgctgtc
actgcaggacctcctggagccaatggacggccaggggccagaggacctccaggacctgaa
ggaacatggcttgagtttttcaagggagctccaggtgtaagaggaagacccggcaacgct
ggctttaaaggaccaaaaggtgaacatggggagtgtgagtgcagtattgtccactctccg
tcgggaccacctggtcctgttggtgagcgtggggatgctggaatgtctggagaatttggg
caggagggtgatgtaggagaccctggtgtccccggcgatgaagggttccctggctctcct
ggaattagtgggttacctggtcctaaaggccagaaaggatactcaagtgtggccaatcag
aaaggatatcctggagatcaaggacaacctggattggatggtcagccaggttcccagggt
gctccaggcctcaatggggttcctggtctccctggtagcagaggtcttccgggagaaggt
ctctggggacaacgtggagaaaaaggttttcctggtcttcctggccgccctggtgtaccc
ggggtcacaggagaccctggcttggtactgggggctctaaaaggccagcgtggtctacct
ggtgatgatggtcttgcaggctttcctggagttcctggaacacctggcagtccaggggac
tgtagaccgactgcagatggaggacaggtggatgtaacaggtccttgcagtgcagatcca
ggacctcctggaccacctggacttccaggaccagaaggactaccaggtttcccaggactg
aatggtcaaagaggaccacaaggttcattaggaatatctggagaaaaaggagaagttgga
gagcatggaataggtggccagactggacccccaggttttcctggtcctcgtggagacctg
ggagttcctggaagcaaaggctccgttggaaaccctggtttgcctggtgttaatggacgg
cacgggtcacaaggcgagaaggggtttcacggggacatcttaggagcatcacccggaccc
cctggtgaccctggtctccctgggtttcagggtaataaaggagaacagggtgatcaagga
aagcaaggttatccaggaatgggcggcatgcctggtatgattggctataaaggagaacgt
ggacctgaaggcctggagggagaggaagggaggccgggggcagctggccaatatggctac
cctggtaatcctgggcaggcaggtccacctggacctcatggtgctttcggagggccagga
ttccctggagaaaggggcactgtgggagacccaggtcctccaggtccaattggtttaaaa
ggaaatcctggagattatggtagtgatggtgtgattggagagtatggtaccagaggtaac
ccgggactaccaggtgtaaatggacagccaggccttcctggaatgaaaggatacaagggc
tctgctggaatgtcaggttttgaggggaaaagagggaaccaaggagtgaagggctttggt
gggctcaaaggagaagatggtgtaccaggccaactgggccccaaaggaatatcaggtcac
caaggagagaaaggtgaaaggggtctgactggaccacctggggaaaaaccaaaaatccct
ttgcagcttgtgtttgaaatgaagggtccgaaggggaaccgtgggagcaaaggaagcaaa
ggatttgttggaccgagaggtgagaaaggttttcctggtgtgccgggcagtgaggggtat
cacggtttgcctggagaccccagtcatgtcaaaggaatccatggagatccaggtgcacag
gggctcccagggataaagggaatgccaggacctacagggaatcgtggaatttctggtttt
caaggaatgaaaggcaacaagggaattaaaggaggtcctggagcgtatggtgcatcggga
gagacaggaaaacagggtttgaaaggtgacaaaggtcctcagatagacctactaggagct
acgggactgaggggggaggatggttttcaaggagtgcagggccacagaggattaaaagga
tatccgggggagacgggagccgtgggttttgatggcattgaaggactgaagggagaatca
ggtgatcctggaatacaaggacccccaggctcggttgggcagaggggaacttttggtaac
cgaggtcaacagggccttcatggattttctggaaaagatggaactcgaggcttagatggg
cttccaggaaacaaaggtttccctggcttgaagggtctttatggtctacatggattaaaa
ggacaaaagggtgtccaaggaacgccaggtctggatatcgttggaccagctggagaatca
ggagccacaggagaaaaaggagagagcggtgaccccaacagtgaaccaggttttccagga
acagctggtttgaaagggttccaaggccctctaggtgatcaaggtcatcctggactgcca
gggattcgtggttcagtaggaccagatggaagcccatacagactgggatcaagtggagac
cctggctttacaggacctagaggattacaaggattccctggaccaaaaggatttcctggt
gttgatgctccacctggagaaaagggtataatcgggttgaacggatttccaggaggtccc
ggtaggaaaggattcaaaggagatcaaggtccatatggatacagggggtctaatggtgtg
tctgggaaaaaaggcataaaaggagatcaaggagtgatgggaatccctggtatgaatggt
ttcaagggagaaagaggctcagttgggtcgaaaggagagtctggaccaccaggtgttcgt
ggaatcccaggcaaccaaggtcctcctgcaatccctgtcacacttccaggggagagaggc
aatccaggtcaacagggtatccgagggccaggtggagtcataggagaacctggggtacag
ggtcctcctggtgatcctggtttcattggaccttctgggtacaaggggatgccagggatt
agtggcacaccaggaacgcctggattccgtggacacaatggacaaatgggtcatcctggt
ctgcagggcatggaaggccagcgtggccaacctgggatccctgggttacctggcatgcct
ggtcgcagcgtcagcgttggctatttactggtgaaacacagtcagtctgaccacacaccc
atgtgtcccgtgggtatgtccaaactctgggacggctacagtctgctgtacttcgagggc
caggaaaaggcccataaccaggatctgggattggctggctcctgtctgcccaagttcaac
accatgcccttcctttactgcaaccctggggacctttgttactacgccagcagaaatgac
aagtccttctggttgtcaacaactgctcctctccccatgatgcctgtggaggaaggagag
atcaaaccgtatatcagccgttgctccgtgtgcgaggctccgtcggttgccattgcagtc
cacagccaggacatcaccataccacagtgcccagcaggctggcgcagcctctggatcggc
tactccttccttatgcacacagcagctggcagcgaaggcgggggtcagtccttgtcatcc
ccaggctcttgcctggaggacttccgcacatcaccgttcattgagtgcaacggtgccaaa
ggaacatgccactactttgctaacaagaacagcttctggctgacctctgtggatcagtcc
ttcaatgctgaaccatcagcagagacacttaaagcaggccagctcttgtcacgcatcagc
cgctgccaggtctgcatgaagaacttataa
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integrated database retrieval system