KEGG   Cynoglossus semilaevis (tongue sole): 103392136
Entry
103392136         CDS       T04866                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04382  Cornified envelope formation
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103392136 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103392136 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103392136 (col4a2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103392136 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103392136 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:csem00536]
    103392136 (col4a2)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103392136 (col4a2)
Glycosaminoglycan binding proteins [BR:csem00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103392136 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103392136
NCBI-ProteinID: XP_008326907
LinkDB
Position
16:complement(10748826..10793892)
AA seq 1669 aa
MRGTMQGQQNRGLTTLRLLLLLLCLSLTILTSGVEAGGKKHSGPCGGRDCSGGCKCFPEK
GARGQHGPLGPQGIQGPLGKKGDSGIQGHKGHKGDSGQHGVIGPKGSVVNFGSMFTLQGH
PGQAGPRGKPGADGCNGTKGEPGFPGQPGFHGPSGFPGQIGRKGDKGDSLELSVYMERFR
GDSGTPGSHGIYGPPGNPGWPGNRGTMGPKGPPGPPGPPGPKGTNAKVIKGNKGEQGDTG
PPGLPGNSTHPHTLPPQGPTGEKGQKGDRGDHAENVGEIGVMGPPGPRGTFGLDGPPGPR
GDPGEDGLIGRVGPKGAIGEPGLLISSGWPFGQSGGQSGPPGEPGPDGDRGPIGDQGPPG
SPGRPASASQVQVFELFGPFGFPGEKGDKGLQGEPGIPAVTAGPPGANGRPGARGPPGPE
GTWLEFFKGAPGVRGRPGNAGFKGPKGEHGECECSIVHSPSGPPGPVGERGDAGMSGEFG
QEGDVGDPGVPGDEGFPGSPGISGLPGPKGQKGYSSVANQKGYPGDQGQPGLDGQPGSQG
APGLNGVPGLPGSRGLPGEGLWGQRGEKGFPGLPGRPGVPGVTGDPGLVLGALKGQRGLP
GDDGLAGFPGVPGTPGSPGDCRPTADGGQVDVTGPCSADPGPPGPPGLPGPEGLPGFPGL
NGQRGPQGSLGISGEKGEVGEHGIGGQTGPPGFPGPRGDLGVPGSKGSVGNPGLPGVNGR
HGSQGEKGFHGDILGASPGPPGDPGLPGFQGNKGEQGDQGKQGYPGMGGMPGMIGYKGER
GPEGLEGEEGRPGAAGQYGYPGNPGQAGPPGPHGAFGGPGFPGERGTVGDPGPPGPIGLK
GNPGDYGSDGVIGEYGTRGNPGLPGVNGQPGLPGMKGYKGSAGMSGFEGKRGNQGVKGFG
GLKGEDGVPGQLGPKGISGHQGEKGERGLTGPPGEKPKIPLQLVFEMKGPKGNRGSKGSK
GFVGPRGEKGFPGVPGSEGYHGLPGDPSHVKGIHGDPGAQGLPGIKGMPGPTGNRGISGF
QGMKGNKGIKGGPGAYGASGETGKQGLKGDKGPQIDLLGATGLRGEDGFQGVQGHRGLKG
YPGETGAVGFDGIEGLKGESGDPGIQGPPGSVGQRGTFGNRGQQGLHGFSGKDGTRGLDG
LPGNKGFPGLKGLYGLHGLKGQKGVQGTPGLDIVGPAGESGATGEKGESGDPNSEPGFPG
TAGLKGFQGPLGDQGHPGLPGIRGSVGPDGSPYRLGSSGDPGFTGPRGLQGFPGPKGFPG
VDAPPGEKGIIGLNGFPGGPGRKGFKGDQGPYGYRGSNGVSGKKGIKGDQGVMGIPGMNG
FKGERGSVGSKGESGPPGVRGIPGNQGPPAIPVTLPGERGNPGQQGIRGPGGVIGEPGVQ
GPPGDPGFIGPSGYKGMPGISGTPGTPGFRGHNGQMGHPGLQGMEGQRGQPGIPGLPGMP
GRSVSVGYLLVKHSQSDHTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPKFN
TMPFLYCNPGDLCYYASRNDKSFWLSTTAPLPMMPVEEGEIKPYISRCSVCEAPSVAIAV
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGSEGGGQSLSSPGSCLEDFRTSPFIECNGAK
GTCHYFANKNSFWLTSVDQSFNAEPSAETLKAGQLLSRISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgagagggaccatgcaagggcaacagaacagaggactgaccactctgaggctgctgctg
ctgctcctctgcctctccctcaccatcctcacctcaggagtggaggcgggtgggaagaag
cacagcggcccctgtggaggaagagattgcagcggaggctgtaaatgtttcccagagaag
ggtgctaggggtcagcatgggcctcttggtcctcagggtatacaaggacctcttgggaaa
aagggtgattctggcatccaaggacataaaggacataaaggtgacagtggccaacatggt
gtcatcggccccaaaggcagtgtggtaaattttggttctatgttcactctgcagggccac
cctggacaagctgggcccagggggaagccaggtgcagatggctgtaacggaaccaaggga
gaacctggtttcccaggtcaacctggttttcatggcccttcaggttttcctggacaaata
ggcaggaaaggtgataagggggactcattggagctgagtgtgtacatggaacgtttcagg
ggagattcaggcactccaggaagtcatgggatatatggacctccaggaaatccaggctgg
cctggtaacagaggaactatgggaccaaaaggtcctccagggcctccaggtccacctgga
ccaaagggcaccaatgccaaagtgattaaaggaaacaaaggagaacaaggggacaccgga
ccacctggcctgccaggaaactctactcatcctcatactctgcccccccaaggacctact
ggagagaaaggccagaaaggagacagaggagaccacgcagaaaacgttggagaaattggt
gtgatgggaccccccggaccacggggcacatttggtttagatggacctcctggaccaagg
ggggatcctggtgaagatgggttaattggcagagtggggccaaagggagccatcggggag
ccaggattactgatttcatctggttggccttttggtcagtcagggggacaatctggtcca
cctggcgaaccaggtccagatggagatagaggcccaataggagatcaaggcccccctgga
agcccaggacgtcctgcctctgcttcacaagtacaagtgtttgaattatttggacccttt
ggttttccgggtgagaaaggagacaaaggccttcagggtgaaccaggaattcccgctgtc
actgcaggacctcctggagccaatggacggccaggggccagaggacctccaggacctgaa
ggaacatggcttgagtttttcaagggagctccaggtgtaagaggaagacccggcaacgct
ggctttaaaggaccaaaaggtgaacatggggagtgtgagtgcagtattgtccactctccg
tcgggaccacctggtcctgttggtgagcgtggggatgctggaatgtctggagaatttggg
caggagggtgatgtaggagaccctggtgtccccggcgatgaagggttccctggctctcct
ggaattagtgggttacctggtcctaaaggccagaaaggatactcaagtgtggccaatcag
aaaggatatcctggagatcaaggacaacctggattggatggtcagccaggttcccagggt
gctccaggcctcaatggggttcctggtctccctggtagcagaggtcttccgggagaaggt
ctctggggacaacgtggagaaaaaggttttcctggtcttcctggccgccctggtgtaccc
ggggtcacaggagaccctggcttggtactgggggctctaaaaggccagcgtggtctacct
ggtgatgatggtcttgcaggctttcctggagttcctggaacacctggcagtccaggggac
tgtagaccgactgcagatggaggacaggtggatgtaacaggtccttgcagtgcagatcca
ggacctcctggaccacctggacttccaggaccagaaggactaccaggtttcccaggactg
aatggtcaaagaggaccacaaggttcattaggaatatctggagaaaaaggagaagttgga
gagcatggaataggtggccagactggacccccaggttttcctggtcctcgtggagacctg
ggagttcctggaagcaaaggctccgttggaaaccctggtttgcctggtgttaatggacgg
cacgggtcacaaggcgagaaggggtttcacggggacatcttaggagcatcacccggaccc
cctggtgaccctggtctccctgggtttcagggtaataaaggagaacagggtgatcaagga
aagcaaggttatccaggaatgggcggcatgcctggtatgattggctataaaggagaacgt
ggacctgaaggcctggagggagaggaagggaggccgggggcagctggccaatatggctac
cctggtaatcctgggcaggcaggtccacctggacctcatggtgctttcggagggccagga
ttccctggagaaaggggcactgtgggagacccaggtcctccaggtccaattggtttaaaa
ggaaatcctggagattatggtagtgatggtgtgattggagagtatggtaccagaggtaac
ccgggactaccaggtgtaaatggacagccaggccttcctggaatgaaaggatacaagggc
tctgctggaatgtcaggttttgaggggaaaagagggaaccaaggagtgaagggctttggt
gggctcaaaggagaagatggtgtaccaggccaactgggccccaaaggaatatcaggtcac
caaggagagaaaggtgaaaggggtctgactggaccacctggggaaaaaccaaaaatccct
ttgcagcttgtgtttgaaatgaagggtccgaaggggaaccgtgggagcaaaggaagcaaa
ggatttgttggaccgagaggtgagaaaggttttcctggtgtgccgggcagtgaggggtat
cacggtttgcctggagaccccagtcatgtcaaaggaatccatggagatccaggtgcacag
gggctcccagggataaagggaatgccaggacctacagggaatcgtggaatttctggtttt
caaggaatgaaaggcaacaagggaattaaaggaggtcctggagcgtatggtgcatcggga
gagacaggaaaacagggtttgaaaggtgacaaaggtcctcagatagacctactaggagct
acgggactgaggggggaggatggttttcaaggagtgcagggccacagaggattaaaagga
tatccgggggagacgggagccgtgggttttgatggcattgaaggactgaagggagaatca
ggtgatcctggaatacaaggacccccaggctcggttgggcagaggggaacttttggtaac
cgaggtcaacagggccttcatggattttctggaaaagatggaactcgaggcttagatggg
cttccaggaaacaaaggtttccctggcttgaagggtctttatggtctacatggattaaaa
ggacaaaagggtgtccaaggaacgccaggtctggatatcgttggaccagctggagaatca
ggagccacaggagaaaaaggagagagcggtgaccccaacagtgaaccaggttttccagga
acagctggtttgaaagggttccaaggccctctaggtgatcaaggtcatcctggactgcca
gggattcgtggttcagtaggaccagatggaagcccatacagactgggatcaagtggagac
cctggctttacaggacctagaggattacaaggattccctggaccaaaaggatttcctggt
gttgatgctccacctggagaaaagggtataatcgggttgaacggatttccaggaggtccc
ggtaggaaaggattcaaaggagatcaaggtccatatggatacagggggtctaatggtgtg
tctgggaaaaaaggcataaaaggagatcaaggagtgatgggaatccctggtatgaatggt
ttcaagggagaaagaggctcagttgggtcgaaaggagagtctggaccaccaggtgttcgt
ggaatcccaggcaaccaaggtcctcctgcaatccctgtcacacttccaggggagagaggc
aatccaggtcaacagggtatccgagggccaggtggagtcataggagaacctggggtacag
ggtcctcctggtgatcctggtttcattggaccttctgggtacaaggggatgccagggatt
agtggcacaccaggaacgcctggattccgtggacacaatggacaaatgggtcatcctggt
ctgcagggcatggaaggccagcgtggccaacctgggatccctgggttacctggcatgcct
ggtcgcagcgtcagcgttggctatttactggtgaaacacagtcagtctgaccacacaccc
atgtgtcccgtgggtatgtccaaactctgggacggctacagtctgctgtacttcgagggc
caggaaaaggcccataaccaggatctgggattggctggctcctgtctgcccaagttcaac
accatgcccttcctttactgcaaccctggggacctttgttactacgccagcagaaatgac
aagtccttctggttgtcaacaactgctcctctccccatgatgcctgtggaggaaggagag
atcaaaccgtatatcagccgttgctccgtgtgcgaggctccgtcggttgccattgcagtc
cacagccaggacatcaccataccacagtgcccagcaggctggcgcagcctctggatcggc
tactccttccttatgcacacagcagctggcagcgaaggcgggggtcagtccttgtcatcc
ccaggctcttgcctggaggacttccgcacatcaccgttcattgagtgcaacggtgccaaa
ggaacatgccactactttgctaacaagaacagcttctggctgacctctgtggatcagtcc
ttcaatgctgaaccatcagcagagacacttaaagcaggccagctcttgtcacgcatcagc
cgctgccaggtctgcatgaagaacttataa

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