Cynoglossus semilaevis (tongue sole): 103392231
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Entry
103392231 CDS
T04866
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103392231 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103392231 (bard1)
04121 Ubiquitin system [BR:
csem04121
]
103392231 (bard1)
03036 Chromosome and associated proteins [BR:
csem03036
]
103392231 (bard1)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103392231 (bard1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103392231 (bard1)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103392231 (bard1)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103392231 (bard1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103392231 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_5
Ank_4
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
103392231
NCBI-ProteinID:
XP_008327029
UniProt:
A0A3P8VTI8
LinkDB
All DBs
Position
16:complement(13315063..13332396)
Genome browser
AA seq
795 aa
AA seq
DB search
MSAADDNNNNDDETAQTNDWKNTREAAEKFRQLLLCSKCSNVMQDPVCLGLCEHVLCRSC
AGPRAGDGCVVCRSPAWVKDIQINRQLSSIIQLFCGLESLLNPTEQPDSSAAEAPSEPEN
HVLNKKNFKIWFSPRSHKVRCAVEKLSEVTLPVDTSLAAQSETITAQQQDLSIFNFTSSS
QDSGSSSQGCNGGNRTGKKRSTKKTAASRKSMVQRTTGAAWRQTKQRIKKQRLEAINKQW
GLSKEVEALKGPEQSCAERAKRKSKRVSFLSPAVTADELQSEVPQESANDLSPGRSTTME
SPSGDGEPNYQPPAMLASVLQQNTHSVDDLQPNTGPDKQRGASPSKSSSEMSSPVDRSGN
LETTPKRPKVSSGRSRKSLHQISPRVLASPGNFGRSDATVREEPGQSPSVDRTLLSPHGR
PSTGSPAVMKRNHKGETPLHLAAIKGDVNAVKELLDQGADPNLKDNAGWTPLHEACNLGH
LAVVEALASKGALLNTPGYKNDSPLHDAVMNGHSAVVKLLLRLGASQSVLNLHGKHPADY
AYGPEMLEIFQEAAAEGKQPANASFSPSASLSVTSDCVRRDEELVFLASTLSQRAQAQLD
ELGQLLGARRVDTFSAAVSHVVVPGHMPTTLSALLGLLSGCWIVRFSWVETCLQAGKWTP
ETEHEAGEGPQRSRINKYSLLPPLFDGCFFFLLGSFKAPTKDDLTKLLREGGGQILTRQP
KPDSDVTQTLSAAAYHALPGTDQALCTQYIIYDPRGPHKPTLVRRGKVWSAPVTWIIDCV
AAFQLLPVPEPHILS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcagatgataataataataacgacgacgaaaccgcacagacgaacgactgg
aaaaacacgagagaagctgcagaaaagttccgtcaattactactttgctcaaaatgctca
aatgtcatgcaggatccagtgtgtctaggtttgtgtgaacatgtgctgtgcaggtcctgc
gccggtccccgggctggtgatggctgcgtggtgtgtcgtagccctgcgtgggtgaaggac
atccaaatcaacagacagctgagcagcattatacagctcttctgtggcttggagtccctg
ctcaatcccaccgagcagccagactcctctgcggccgaagccccttctgaacctgaaaac
cacgtcttaaacaagaagaactttaaaatctggttcagtcctcgcagccacaaagtacgc
tgtgcagtggagaagctatcggaggtcaccttgccggtcgacacgtctctggcagctcag
tcagaaaccattacagctcagcaacaggacctgtcaattttcaatttcacctcgtcctca
caagactcaggttcttcttctcaaggatgcaacggtggcaacagaacagggaaaaagagg
tcaactaagaaaactgcagccagcaggaagtcaatggtgcagcgaacaactggggccgca
tggagacagaccaagcaaaggataaagaagcagaggctggaggccataaataagcaatgg
gggctctccaaagaggtggaagccttgaagggaccggagcagagctgtgctgaaagggca
aagagaaagagtaaaagggtttcattcctgagccctgctgttaccgctgacgagcttcag
tctgaagtgccacaggagagcgctaatgacctcagccctggcaggagcaccacgatggag
agcccctcaggagatggagaaccaaattaccaaccaccagccatgttggccagcgtcctc
cagcaaaacacacactctgtggacgacctgcagccaaacactgggccagataaacaacgc
ggtgcgtctccttcaaagagttcatctgagatgagctcgccagtggatcgttctggaaac
ctggagaccacaccaaaacgacccaaggtctcatcaggccggagcagaaaatcattacat
cagatatcaccccgagttctggccagccccgggaactttgggaggagtgatgcaacggtc
agagaggagcctggacagagcccctcagtcgacagaaccctcctctcaccacatggacga
ccaagcacaggcagccccgcggttatgaagaggaaccacaagggagagaccccgctgcat
ctagctgctattaagggagatgtaaacgccgtcaaagagctgctggaccagggcgctgac
cccaacctgaaggacaacgccggctggactcctctgcatgaagcctgtaacctgggtcac
ctggctgtagtggaggctctggcgtcaaagggagcgctgctcaacacccctggctataag
aacgactctccgctgcacgacgcggtgatgaacggtcattctgctgtcgtcaaactgctg
ctgcgactcggagcgtcccagagcgtccttaatctgcacgggaaacatcctgcagattat
gcttacggcccggagatgctggagattttccaggaagctgcagcagaaggaaaacaacct
gcaaatgcatcttttagcccctcagccagcctctcagtgacgagcgactgtgtgagaaga
gatgaagagctggtgtttctggccagcacgttgtctcagcgagcccaggctcagctggat
gaactggggcagctgttgggagccaggagggtggacaccttttctgctgcagtgagccat
gtggtggtgccaggacacatgcccaccaccttgtctgccctcctgggtctcctgtctgga
tgctggattgtcagattcagctgggtggagacttgtctgcaggccgggaaatggacgcct
gaaacggagcatgaagcaggagaaggcccccagcgcagtcgcatcaacaagtacagcttg
ctcccgccacttttcgacggctgtttcttcttcctcctgggatcgttcaaggcaccgacc
aaagacgacctcaccaagcttctgcgagaaggaggaggtcagatcctgacccgacagccc
aagcccgatagcgatgtgactcaaacgctcagtgctgccgcctaccacgccctgccgggt
actgaccaggccctgtgtacccagtatatcatctacgacccacggggtccacacaagccc
acgctggtcagaagaggcaaggtttggtcagcacccgtcacctggatcattgactgcgtc
gctgccttccagctcctccctgtgccggagccacacatactgagttaa
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