Cynoglossus semilaevis (tongue sole): 103392294
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Entry
103392294 CDS
T04866
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103392294
Membrane trafficking [BR:
csem04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103392294
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
103392294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Lgl_C
Synaptobrevin
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
103392294
NCBI-ProteinID:
XP_016895528
LinkDB
All DBs
Position
16:complement(14799864..14834711)
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AA seq
1063 aa
AA seq
DB search
MAVRGNRAWKHTHRQHRVLHFVWIRDHVEQGHRTLLIGFESGTVVQWDLRGKKADFRIYY
DEAIHSVSWHHEGKQFMCSHSDGSLTLWNLRNTTKPFQVTFPHGKIQKDARKESCKPILK
VEYKTSRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDHPIVEFMVLCETPYNN
EVQDPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDVHESPVTCTAYFADCPPDIIPILY
SIGAKHKKTGYSHKEWPISGGTWTLGSHTYPEVIITGHADGSIKFWDASAITLQMLYKIK
TSKVFDKPKPGDGRSADLVEEDPFAVQMVSWCPHSRIFCVVGISAHIILYRFSKHDANTQ
IVSLDVRLQCESDDVITPSENENPPFCPDSGSHSPQPHHQLPVSPNSGAPDSNRDSVPYL
KVKDRVVRVPPGYQAELVIQLLWVDGEPPQQITTLDINSAYGLLAFGNCNGLAIVDYLQK
TILLCMSTLELYGAADPYQRLTRSPRRNRQSTSGLTELSDNQQSTDMERSKSPTAVYYPS
SLHNDARVLPEPVASLRASHCSPVYYLLDNVKGPGRKLSLPTDLKTDLDHVNGHCTSPTS
QPCTAGKPRAPGGPEGPRLTRRGPGRPPFRKAQSAACMEISLPVSHTEGYASRRAMLQQL
HGVTMYSHDEHHSPPPYCWTDRESRENSFSRSRSSSVSSIDRDTKEAVTTLQFGEFYGRK
SDSVAPPSLWVGTSLGVVVVIPMSIPTEQEDRLEEPVSIGPNGAVLMLKGSVLRFGFLDL
TGVLIQSPYECWRDPNAPDDPDRPRRRKLVNFSPSSSQEACGEGHLAVVCTERQAKVFLM
PSQSCLFVHNITESSFVLRADVVSLCNSVCLACFCANGHIMTLSLPSLRPLMDVNYLPLT
DMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNLQEMLGELFTPTETPEAQNRGFL
KGFFGGNTNTFDREELFGEAAAGKASRSLAQHIPGQGGLEGMKVAAGGAVGDLARARIAL
DERGQRLGELEERTALMMSSAETFSKHAHELMLKCKDKKWYQF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacgtgggaacagagcgtggaaacacacacatcgtcaacatcgagtccttcat
tttgtctggatacgtgatcatgtggaacaaggccatcgaactctgctcatagggtttgag
agtggaaccgtcgtacaatgggacctccgaggcaagaaggccgacttcagaatctactat
gatgaggccattcactccgtcagctggcatcacgaagggaaacagttcatgtgcagtcac
tccgacggcagcttaacactgtggaatctccgaaatacaacaaagccgttccaggtcacc
ttccctcatggtaagatacagaaggacgcgaggaaggagtcgtgtaaacccatactgaag
gtggaatacaagacctcgaggaacagcgagccttttgtcatcttctccggcggcctctcg
tatgacaaggcaggacgccgacccacgttaaccatcatgcacggcaaagccatcacggtg
ctggagatggaccatcccatcgtggagttcatggttctctgtgagactccgtacaacaac
gaggtccaggatccttacgctgtggtggttcttctggagaaagacttaattgttgttgat
ctgactcagagcaacttcccagtctttgagaacccttaccccatggacgtccacgagtcg
cctgtgacctgcacagcctattttgccgactgcccccccgacatcatccccatcctctac
tccatcggagctaaacacaagaaaacgggctacagccataaggagtggccaatcagtgga
gggacatggacgttaggctcccacacctacccagaagtcatcatcacaggacacgccgat
ggatccattaaattttgggacgcgtctgcaatcactctccagatgttgtataagataaag
acctccaaggtcttcgacaaacccaagcctggtgacgggcggtctgcagacctggtagaa
gaagaccccttcgccgtccagatggtcagctggtgtcctcacagccgcatcttctgtgtg
gttggaatctcagctcacatcatcctctacaggttcagcaaacacgacgccaacactcag
atagtgtcactggacgtccgtctgcagtgtgaatcagatgacgtcatcactccgtcagag
aatgaaaaccctccgttctgtcctgactctggctcccactcacctcagcctcatcaccaa
cttcctgttagtcccaacagtggagctcctgacagtaacagggacagcgtaccatacctg
aaggtcaaagacagagtcgttcgtgttcctcctggttaccaggcggagctggtcattcag
ctgctctgggtggacggagaacctccgcagcagatcaccactctggacatcaactctgcc
tacggcctcttggcgtttggaaactgcaatggccttgcgatcgtggactacttacagaaa
accatcctgttgtgtatgtcgaccctggagctgtacggagccgccgacccctaccagcgc
ctcacgcgctccccccgcaggaaccgacagtccacctcaggccttacagaactctccgac
aaccagcagtccactgacatggagagaagcaagtctcccactgcagtttattacccatca
tcccttcacaacgatgcacgcgtcctgccagaacctgtggccagtctgagagccagccac
tgcagtccagtctattacttactggacaatgtaaagggacccggcagaaagttaagtctg
ccaacagatcttaagactgatcttgatcatgtcaatggacattgcactagccctacctcc
cagccctgcacagcggggaagccccgcgcccccggggggcccgaggggccacggcttacc
cgcagaggccccggccgaccaccgttccgcaaggcccagtctgctgcttgcatggagatc
tctttgcctgtgtcccacactgaaggttatgcatccaggagagcgatgcttcagcagtta
cacggagtcactatgtactcccacgacgagcaccacagcccccccccctactgctggact
gaccgagagagtcgtgaaaactccttcagccgctcccgcagctccagcgtgtccagcatc
gaccgcgacaccaaggaggccgtcacaacgctgcagtttggagagttctacggccgaaag
agcgactctgtggcgcccccgtctctgtgggtgggcaccagcctgggtgtggtcgtggtc
atccccatgtccatccccactgagcaggaggacaggctggaggaaccagtgtccatcggc
cccaatggagctgtcctgatgctgaagggctcagtcttacgctttgggttcctggacctc
acgggcgtcctcattcagagcccgtacgaatgttggcgagatcccaacgccccagacgac
cccgaccggccgcgcaggcgtaagctggtcaacttttccccgtcgtcgtcacaggaagcc
tgtggagaaggacacctggctgtggtctgcaccgagaggcaggccaaagtgttcctgatg
ccctcgcagtcctgtctctttgtccacaacatcaccgagtcctcgttcgtactgcgagcc
gacgtggtgtcgctgtgtaacagcgtgtgtctggcctgcttctgtgccaacggtcacatc
atgacactcagtttgcccagtctcagacctctgatggacgtcaattaccttcctctgaca
gacatgcgcatcgcgaggaccttttgcttcaccaatggggggcaggctctttatctcagc
tcccccacagagatccagaggatcacgtacagccaggagatgtgtgacaacctgcaggag
atgctgggggagctgttcacaccgacagagaccccggaggcccagaacagaggcttcctg
aagggcttctttggaggaaacacaaacacctttgacagagaggagctcttcggagaggca
gcggctgggaaagcatcacgcagcctggcacagcacatccctggacagggagggctggag
ggcatgaaggtagcagctggtggagctgtgggcgacctggctcgagcccgcattgccctg
gatgagaggggccagagactgggggagctggaggaacggacggccctcatgatgtccagt
gcagaaactttctctaaacatgctcacgagttgatgctgaagtgcaaggacaaaaagtgg
taccagttctaa
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