Cynoglossus semilaevis (tongue sole): 103392861 Help Entry 103392861         CDS       T04866                                  Symbol xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism csem  Cynoglossus semilaevis (tongue sole) Pathway csem03040   Spliceosome Brite KEGG Orthology (KO) [BR:csem00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103392861 (xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csem03019]     103392861 (xab2)    03041 Spliceosome [BR:csem03041]     103392861 (xab2) Messenger RNA biogenesis [BR:csem03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      103392861 (xab2) Spliceosome [BR:csem03041]  Complex B   Other components    Prp19-related factors     103392861 (xab2)  Complex C     103392861 (xab2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_2 TPR_12 TPR_8 TPR_15 ARM_TT21_C TPR_16 ARM_TT21 TPR_MalT NRDE-2 TPR_1 Big_2 Motif Other DBs NCBI-GeneID:  103392861 NCBI-ProteinID:  XP_008327835 UniProt:  A0A3P8VTY4 LinkDB All DBs Position 17:complement(6164214..6170749) Genome browser AA seq 851 aa AA seqDB search MVPVNGKADVLFEDDDLPYEEEIIRNPYSVKCWLRYIEFKQNGPKSTLNIIYERALRELP GSYKLWYSYLRERRKQVKGKCVTDPGYEEVNNCHERALVFMHKMPRIWLDYCQFLVSQCK ITRSRRTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENTEEYID YLRSVGRLDEAAVRLAAVVNDENFVSKEGKSNYQLWHELCELISQNPDKVTSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDNYAQFEEN MIASKMETTAELGQDEDDDVDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK LYDGNPRQIINTYTEAVQTVDAIKSTGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN YKQVDDLAAVWCEYGEMELRHENYDQALRILRKATAIPSKKAEYFDSSEPVQNRVYKSLK VWSMLADLEESLGSFQSTKAVYDRIIDLHIATPQIVINYAMFLEEHNYFEESFKAYERGI ALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE YGLARHAMAVYERATQAVETEERHHMFNIYIKRAAEIYGVTYTRAIYQKSIEVLPDEHAR DMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTSNFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMLKATTSATGTVSDLAPGQTGVDDMKMLEQKAHQLAAEAEK DKPKPKEKILFVRSDTSRSELAELSKQANPDEIDIDDDDDNEADDADQEPEEVQLEQRSV PTAVFGGLKDE NT seq 2556 nt NT seq  +upstreamnt  +downstreamnt atggtgccggtaaacgggaaagctgatgtattgttcgaggatgatgacctgccttatgaa gaggagattattaggaacccctactcagtcaagtgctggttgcgatacattgaattcaaa caaaatggaccgaaatcaaccttgaatataatctatgaacgggctctgagagagttgccc ggaagttataagctgtggtacagttatctaagagaacgacgtaaacaagtcaaagggaaa tgtgtcactgatccaggttatgaagaggtcaataactgtcatgaaagggctctggttttt atgcacaagatgcctagaatatggctggattattgccagttccttgtatctcagtgtaag atcacacgaagtcgacgtacatttgaccgtgcactcagagctcttcctgttacacagcat ccacgcatctggcctttgtatctccgttttgttcgcaacctgcccctacctgaaacagct atacgagtgtatcgtaggtatcttaagctttctccagaaaacacagaggaatacattgac tacttacggtctgttggccgtttggatgaagcagctgtgcggctagcagctgttgtcaat gatgaaaattttgtctcgaaagagggcaagtcaaactaccagctttggcatgaactgtgt gagctaatctcccagaaccctgataaagtgacatctttgaatgtcggcgccattatcagg ggaggcctcactcgctttacagaccaactgggaaaactttggtgctctctagctgactat tacattcggagtggtcactttgaaaaggctcgtgatgtgtatgaggaagccatccttaca gtggtaactgtaagggatttcacacaagtatttgacaactatgctcagtttgaggagaac atgattgcctccaagatggagactactgctgagctggggcaagatgaagatgatgatgta gacctggagctcagactggcccgctttgagcaattgatagctcggaggcctctcctcttg aacagtgtcctccttaggcagaacccacacaacgtacatgaatggcacaagcgagtgaaa ttgtacgatggcaatccacggcagataatcaacacatataccgaggcagttcagactgtg gatgcaattaaatccacaggaaagcctcattcgctgtgggtctcttttgccaaattttat gaagaaaatgagcagctggatgatgccaggacgatctttgaaaaggctaccaaggtgaac tacaagcaggtggatgaccttgctgccgtatggtgtgaatatggagaaatggagctacgc catgaaaactatgatcaagcactacgtatactgaggaaagctacagccattccatcgaag aaagctgagtactttgattcatctgagccagttcaaaacagagtctacaagtctttaaaa gtctggtctatgctggcagacttagaggaaagtcttggctcattccagtccacaaaagca gtttatgaccgcattattgacctccacattgcaacgccacagatcgtcatcaattatgca atgtttcttgaagagcacaactactttgaggaaagcttcaaagcatatgagcgaggtatc gcattatttaagtggccaaatgtgtatgatatctggaacacttacctcaccaagttcatt gaccggtacgggggcaagaagctggaaagagccagagatttgtttgaacaagccctagat ggttgccctgcaaagtttgcaaagactatttacttgttgtatgcaaagttggaagaagag tatggattagcgagacatgccatggctgtgtatgaaagagcaacacaagcagttgaaact gaggaaagacatcacatgttcaatatctacatcaagagagcagcggaaatttatggtgta acatataccagagcaatatatcagaaatctattgaggtgcttcctgatgagcatgcgagg gatatgtgtcttcgatttgctgacatggagagtaagctgggtgagattgatcgtgccaga gcaatctactcctactgctctcaaatctgtgatccaagggtgacctctaacttctggcaa acctggaaagaatttgagattcgccatggaaatgaagacacgattagagaaatgttgagg atcaaacgcagtgtacaggctacgtacaacacccaagttaacttcatgtcctctcagatg ctgaaggccacaacaagtgccactggcactgtgtcagatcttgctccaggccagacagga gtcgatgacatgaaaatgttggagcagaaagcacatcagcttgctgcagaagctgagaag gacaaaccaaagcccaaagagaagatcctgtttgttagaagtgacacttctcgaagtgaa ttggctgagttatccaaacaagccaatcctgatgagattgacattgatgatgacgatgat aatgaggctgatgatgcagatcaagaaccagaggaagtgcaacttgaacagagaagtgtc ccaacagctgtcttcggtggcctgaaagatgaataa

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