Cynoglossus semilaevis (tongue sole): 103393198
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Entry
103393198 CDS
T04866
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04148
Efferocytosis
csem04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103393198
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103393198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csem04090
]
103393198
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103393198
04091 Lectins [BR:
csem04091
]
103393198
CD molecules [BR:
csem04090
]
Proteins
103393198
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
103393198
Lectins [BR:
csem04091
]
I-type lectins (Siglecs)
103393198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
V-set
V-set_CD47
Ig_C19orf38
C2-set_2
Big_13
DUF6232
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
103393198
NCBI-ProteinID:
XP_016896097
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All DBs
Position
17:complement(10709446..10721360)
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AA seq
785 aa
AA seq
DB search
MDFRPHDFLLHLLLTILQLLANGARGQSLYIIDNVGLWILPANTVPSGTSVTLQCQVTVS
HDNTAHLSHTFQLRRDEVLIYSITTTEDKVTFELTPSRAADSGSYECQVTVKEKSQKSHS
QKLEVTGLQTPVLNLETNTLYEGNDFKATCRAPEEKGSLVFRFLRRYRNEEPQTMKTVPA
TGNSSETTLVLGQAGDYSLYCEYDITLVSGTRRSNHSNEEHVIVKVLTIKPVMNVLPSSN
VYEGDLVEVVCRVEGAVKDVHIYLTKNKRILNETSSSILRHVFRAQEGDSGELVCKTEWR
NVQKQNYYPFTVKELFSKPRLVLEPLELFEGDRMTLTCTVTVYVPERISQGTLQYTVYKN
NVKITPSQSYITMAHPSNNGNYTCKAAANFRSHSFIKESQTVVVEAKVMLSKPVLSVVNG
TLILGKPFQLHCHSDNGTLPIKYTLQGPKGFVGFVMVTRPEQKAIFNCPPIYKSSDLNKF
ICHANNSPQRPVEFGLVSQLFQTTKIIEPVSQPVLTIHPHMGDASEGQDLTLNCSVQSGT
PPITFSWYHTERGALTTQTSKKLEQSFHIRNIKESHKGGYYCRSDNDASHTKQSNTVTVK
VRWAGWKKGLVAFFCILLVLVLIIVVAFRKRLRQFKRKQTVELSVKSAGTKVERLSLTQA
DMMEAANVTPGMMGKSVWSEHVSVSESDDQRSEAATDAVYTGPEEKGTDVMKNDMRNSKH
DDAEQTDGQGSLQYAELNQNIGHHGDQGDTVDQHIEHVDHEGHSDQSVQQDHLVETETDP
AVNGE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagaccccacgactttctgctgcatctgctcctcaccatcctccaacttttg
gcaaacggtgcacgaggacagtcattgtacatcatagacaatgttggcctctggatcctc
cctgccaacactgtgcccagtgggacgtcagtcaccctgcagtgccaggtcaccgtcagt
cacgacaacactgcacacctgagccacaccttccagctcaggcgtgacgaggttctcatc
tacagcatcaccaccactgaagataaggtgacgtttgaactgaccccgtccagggctgcc
gactctgggagctacgagtgtcaggtcacagtcaaggaaaaaagccagaagagccacagc
caaaagctggaggtgacaggtctccagaccccggtcctgaacctggagaccaacacactc
tacgagggtaatgacttcaaagccacctgcagagctccggaggagaaaggatccctcgtt
tttcgattcctccggaggtacagaaacgaagagcctcagacgatgaaaacagtcccagcc
accgggaactcctcggagaccacgctggtcctgggtcaggccggagactactccctgtac
tgcgagtacgatatcacactggtttctgggaccaggcgatccaatcacagcaatgaggag
catgtgatcgtcaaagtactgacaatcaagcccgtcatgaacgtgctgccatcgtctaac
gtctacgaaggcgacctggtggaggtggtgtgcagagttgagggcgctgtaaaagacgtc
catatttacctaacgaagaacaagaggatcctgaatgaaacctcctcctccattctccga
cacgtattcagagcacaggaaggagattctggggagctggtgtgtaagacggagtggaga
aatgtgcagaaacaaaactattacccattcacagtcaaagagctcttctcaaaaccaaga
ctggttctggagcctttagaacttttcgagggagaccgcatgacactgacctgcaccgtc
actgtttacgtccctgagcggatcagccaaggaaccctgcagtacaccgtctacaagaac
aacgtcaagataacaccttctcagagctacatcaccatggcacatcccagcaacaacgga
aactacacctgtaaagccgcggctaactttcggtcgcacagtttcattaaagaaagtcag
acagttgtggttgaggccaaagttatgctctccaagccagtgttgagcgtggtgaacggt
acgctcatattaggaaaacctttccagcttcactgtcacagcgacaacggcacgcttccc
atcaagtacaccctacaaggtccaaaggggttcgtcgggttcgtgatggtgaccaggccg
gagcaaaaggccatctttaactgcccgcccatctacaagagctcagacctcaacaaattt
atttgtcacgcaaataacagcccacaaaggcctgtcgagtttggattagtgtcgcagctg
ttccagacgaccaaaatcatagaacccgtgtcacagcctgtgttaaccatacacccccat
atgggggacgcctctgagggtcaggacctgaccctgaactgctccgttcagagcggcact
cctcccatcaccttctcctggtatcacactgagagaggtgctctcaccactcagacctcc
aagaaactggagcagtcctttcacatacgcaacatcaaggaaagtcacaagggtggatac
tactgcaggagcgacaacgacgccagccacaccaagcagagtaacaccgtcactgtcaaa
gtcaggtgggccggctggaaaaaaggtctcgtcgcgttcttctgtatcctcctggtcctg
gtgctgatcatcgttgtcgccttcaggaaacgcctccgtcagttcaaaaggaaacaaaca
gtggagctgtcggtgaagtcggccggcaccaaagtggagcgactgagtctcactcaggcc
gacatgatggaagctgcaaatgtgacaccgggcatgatgggtaaaagtgtttggagcgaa
cacgtttcagtctccgaatctgatgatcaacgcagcgaggcggcaactgacgctgtatat
acaggtccagaagagaagggaacagacgtcatgaagaacgacatgaggaactccaaacat
gatgatgcagaacagaccgatggtcaggggtcactccaatatgcagaactgaatcagaat
attggtcaccatggcgaccaaggagacaccgtagaccagcacattgagcatgtagaccat
gaaggacacagcgaccagtctgtccaacaagaccacctggttgagactgagaccgacccg
gccgtcaacggagaatga
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