Cynoglossus semilaevis (tongue sole): 103393273
Help
Entry
103393273 CDS
T04866
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X4
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04020
Calcium signaling pathway
csem04080
Neuroactive ligand-receptor interaction
csem04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103393273 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103393273 (grin2a)
04082 Neuroactive ligand signaling
103393273 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103393273 (grin2a)
Ion channels [BR:
csem04040
]
Ligand-gated channels
Glutamate (ionotropic)
103393273 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
103393273
NCBI-ProteinID:
XP_008328397
UniProt:
A0A3P8WSH3
LinkDB
All DBs
Position
17:complement(11782551..11883516)
Genome browser
AA seq
1504 aa
AA seq
DB search
MVAVVTLIPDPAVAQKRSGGEKVPVLNIAVILGHTRYISDRDIRALWSKEDPIDVNVVTL
LINETDPKSIITHMCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSS
MIMADKDVKSTFFQFGASIQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVD
NSFVGWDLQNIITLDAVEEDSRSQIMLKKLQSPVILLYCSKDEAILILEEARSLGLTGFG
YIWIVPSLTTGNPEVTPEEFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLVEYGD
IPEAKTSCYGQMEKTNKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKERE
WEKMGKLDNRSLTLKYPVWPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMR
NSVPCRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINN
VWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLE
PFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGL
VFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQ
NPYAYSPPFRFGTVPNGSTERNIRKNYPAMHQYMVKYHQTGVQDALVSLKSGKLDAFIYD
AAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEEL
EAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTG
VCSGTPGLLFSISRGIWSCIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNITNLGGS
HMNSPKREFMHSAGPIIMDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKNHL
NNYMFQGGQHPLTLNDANPNTVEVAVSADAVQTNAKPPRTLWKKSVETLRSVPPGPPPMP
DMLMPDPRISMKTQRYLPEEAAHSDVSDCSSRAASYKDPENNKHLKPKDSLKKRSVTSKY
PRDCSEVELSYLKTKQVTGGTNQTGRGGGGEKIYTIDSDREMSLHSDPIQYHESRGLATD
DLEYPEIFSDHSDNYRKCEQPIIHLNSSPLHRTDSDLLPDPTYAKHYNMKEKNISLSPHE
TLDRYKQTHCRSCLSKVTTGYPSAGPYTPTGSVTRSPYNRCEACLHMANLYDISEDQLLA
DPVSPTLHHQQQQQQQSDDMFGMYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDIDL
GRPARSVSLKEKDRFLDSSSDSHYTNLFGARPCSGRLFGTGSKSLFNHNLEESKRSKSLY
PAHGSENPFLTHSLREDSNNRLIHGRSSSDIYKQLGLASPVSVLGPGPIKARNDANNLRS
SVKSTTSYCSRDGRIANDMYNKEHVMPYAANKTNAYPAQRGVLNSAQFSNRRVYKKIPSL
ESDV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagtggtgaccctgattccagatcccgcggtcgcccagaagagaagtggaggt
gaaaaagtgcccgtcctgaacattgccgtgatcctgggacacacgcgctacatatcagac
cgggacatccgggcgctgtggagcaaggaggaccccatcgacgtaaacgtggtgacgctg
ctgataaatgagactgacccgaaaagcatcatcacacacatgtgtgatctgatgtctgga
accaagatccacggcgtggtgtttggagatggaaccgaccaggaggcgatcgcccagatt
ttggattttatttcctcacaaacccttatacccatccttggcatccatggagggtcgtcc
atgataatggctgataaggatgtgaagtcaacgttcttccagtttggtgcttccatccag
caggaggcgctgttgatgttgaacattatggaggagtacgactggcacatcttctccata
gtgacttccaagttcccgggctaccaggagttcatcaacatcttgaaaacgacggtggac
aacagttttgttggttgggatctgcagaacatcatcaccctggatgcggtggaggaggac
agtcgctctcagatcatgctgaagaaattgcagtcccctgtcatcctgctctactgttcc
aaggacgaggccatcttgatcctggaggaggctcgttctctgggcctcacaggattcggg
tacatctggatagtgccgtcactcaccaccgggaacccagaggtgacgcctgaagagttc
ccatcaggaatgatttcagtgtcgtacgacgactgggactaccccctggaggcgcgggtc
cgtgacgggctcgggatcataacgtcagcggcggcagccatgttggtggaatatggcgac
atccctgaggccaaaacttcctgttacggccagatggaaaagacaaacaagctcccaccg
agtgcactgcataagtacatgatgaatgtgacgtgggacggcagagacctgtccttcaca
gaagacgggtaccaggagaacccaaagctggtggttattgttctcaacaaggagagagaa
tgggagaagatgggaaaactggacaaccgcagcttgacactgaagtatccagtctggccg
cgcttcaactcctttggtgacgccgagcttgatgacaaccacctgtccatcgtcacctta
gaagagaagccctttgtgatagtggaggatgtggagaggctcacggggacctgcatgagg
aactctgtgccctgcagaaagcatatcaaagacaacaccacagaggcggggggcacgtac
atcaagaagtgctgcaaaggcttctgcattgatatcctaaagaaaatcgccaaatatgtc
aagttcacctatgacctgtacctggtaaccaatggcaagcatggaaagaagatcaacaat
gtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcggatct
ctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaacc
gggatcagcgtcatggtgtcccgtagtaatggaacagtctccccatcagcgtttctcgag
ccattcagtgcatcagtttgggtgatgatgtttgtgatgctcctactggtgactgcaatg
gctgtcttcatgtttgagtacatcagtccacttggcttcaacagaaacctggcgcaggga
aaagacccccatggtccgtctttcaccatgggtaaggccgtgtggctgctgtggggtctg
gtcttcaacaactctgtgccggtgcagaaccctaaaggcaccaccagtaaattcatcgtg
tccgtgtgggccttcttcgctgtcatcttcctggcttcctacactgccaacctggccgcc
ttcatgatccaggaggagtttgtcgaccaagtcacagggctgtctgacaacaagttccag
aacccgtatgcctactccccgccgtttcgctttggcacggttcccaatggttccaccgag
aggaacatcaggaagaactaccctgccatgcaccagtacatggtgaagtatcaccagacc
ggggtccaggatgcactcgtcagcctcaagtcaggtaaactggacgccttcatctacgat
gctgcggtgctgaattacatggctggaagagacgagggatgtaagctggtgaccataggc
agcgggtacatcttcgctactactggttacggcatcgccctgcagaaaggttcctactgg
aaaagacaggtggacctggcgatcctggccattattggagatggtgaaatggaggagtta
gaagcccagtggctgacaggaatttgccacaatgagaagaatgaggtaatgtccagtcag
ctagatgtagacaacatggctggtgtcttctacatgctggccacagccatgggtctctcc
ctcatcacctttgtctcagagcatctgttctactggagactcagatactgtttcaccggg
gtctgctccggcacaccaggtcttcttttctccatcagtcggggaatctggagttgcatc
cacggagtccatattgacatgaagaaaaagacagatttggactttagtcctcaggacaaa
atgctcaaacttatcaagtcggccaaacagatgaccaacattaccaatctgggtggctcc
cacatgaactcacccaaacgtgagtttatgcactcagctggcccaattatcatggacatg
atggccgagaagggcaattttatctatgctgacaacagaagctacgccccaaaagatatg
atctacggggacacaggtgatctgcagtcttatctcgccaatcgacacaaaaaccacctc
aacaactacatgtttcagggaggccagcatcctctgaccctcaatgacgccaatccaaac
acagtagaggtggccgtaagcgctgacgctgtgcagactaatgccaaaccaccccggacc
ctgtggaagaagtccgtcgaaacactgcggtcagtgccacctggtccccctcccatgcct
gacatgctgatgccagatccacgaatttcaatgaagacccagcgctaccttcctgaagaa
gcagcccactctgacgtctctgactgttccagcagagctgcctcctacaaggacccagaa
aacaacaagcacttgaaacccaaggacagcttaaaaaaaagatccgtgacgtcaaaatac
ccaagagactgtagtgaggtggagctgtcctacttaaagactaagcaggtcactggtgga
accaaccaaactgggagaggaggaggaggagagaaaatttacaccatcgactcagaccga
gaaatgagcttgcactcagaccccattcagtaccacgagagccgcggtctcgctactgat
gatttggaataccccgagatcttctctgaccacagtgacaactataggaaatgtgagcag
cccatcatccatcttaactcttcacctttgcatcgcacagattccgatcttttaccagac
ccgacttatgctaaacactataatatgaaggagaaaaacatttccttgtcaccccatgaa
accctggatcgctacaaacagacacattgccgttcatgcttgtcaaaagtgaccactggc
tacccttcagcgggtccttacacacccactggatctgtcacacggtcaccctataatcgg
tgtgaagcctgcctccacatggccaacctgtatgatatcagcgaggaccagctcctcgca
gacccggttagccccaccctgcaccaccaacagcaacagcagcagcagtcagacgacatg
tttggtatgtattggccacagacagatgggccacatgttcaaaagagaaaccggttgagg
ctgagccgtcagcactcctttgacaacataatgctagaaaagcccaaggacatagacctg
ggccgaccggcgcgtagtgtcagcctcaaagagaaggatcgctttctggattcctcatca
gattcgcactacacaaatctttttggagcgcgaccttgctctgggagactgtttggcacc
gggtccaaatcattgttcaaccataatttggaggagagcaagagaagcaagtctctgtat
ccggcccatggttcggaaaatcctttcctcacccattctctgagggaggacagcaacaac
agactgatccatgggcgtagctcctctgatatttacaaacaactgggcttagcctcacct
gtatctgtcctcggaccaggtcccatcaaagcacgcaatgatgcgaacaatcttcgctct
tctgtgaaatccactacatcatactgctcgcgagacgggcgaattgccaatgacatgtac
aataaggagcatgtaatgccttacgcagccaataagactaatgcatacccagcccaacgc
ggcgtcctaaactcagctcagtttagcaatagacgggtgtataaaaaaatacccagtctg
gagtcagatgtttag
DBGET
integrated database retrieval system
