Cynoglossus semilaevis (tongue sole): 103393300
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Entry
103393300 CDS
T04866
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
csem04137
Mitophagy - animal
csem04144
Endocytosis
csem04340
Hedgehog signaling pathway
csem04350
TGF-beta signaling pathway
csem04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103393300
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103393300
04350 TGF-beta signaling pathway
103393300
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103393300
04137 Mitophagy - animal
103393300
09144 Cellular community - eukaryotes
04520 Adherens junction
103393300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103393300
04121 Ubiquitin system [BR:
csem04121
]
103393300
03029 Mitochondrial biogenesis [BR:
csem03029
]
103393300
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103393300
Membrane trafficking [BR:
csem04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
103393300
Autophagy
Mitophagy
Other mitophagy associated proteins
103393300
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
HECT type E3
103393300
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103393300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF6426
Motif
Other DBs
NCBI-GeneID:
103393300
NCBI-ProteinID:
XP_008328438
LinkDB
All DBs
Position
17:complement(12039901..12054420)
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVLQGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQSQRIRGQDTRGHGHTPQNRPHGNQQPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQVKESSQTPQMDVGGEDGGGGGVGGSSGGGDGDMAARYERDLVHKLKLL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHY
INGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKF
SQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDH
KELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGST
RVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactagaagaaacggctccagcatcaaaatccggctgacagtatta
tgtgccaagaatctcgcaaagaaagacttctttcgtctgccagatccatttgccaaagtg
gtggtagacggatcaggtcagtgtcactcgacagacacagtcaagagcacattggatccc
aaatggaatcagcactatgacctttatatcgggaagacggactccatcaccattagtata
tggaatcacaaaaagatccataaacgacagggggccggcttcttgggctgcatacgtctt
ctttccaatgccatcagcaggctaaaagacacaggataccagcgtttagatctatgtaaa
ctgaatccctcagacagtgatgcagtgcgggggcagattgttgtgagcttacagacgagg
gaccgcatcggcagcggaggccccgtggtcgactgcagaggactgttggaaaatgatggg
cctgtgttacagggatgtttcagtgaagagccgctgccttactctgaccccactggcgct
gcaggtggcggtaattgtcgactggactcccccagtcaggagggccgtcttcagagccag
cgaatcagagggcaggacactagaggtcatggccacacccctcaaaacagacctcatggg
aaccagcagccagatctccctgagggatacgaacaacgaacgacggtccagggccaggtg
tacttccttcatacgcagacgggcgtcagtacctggcatgacccccggataccacgggat
ttggccagtgtgagctgcgaggagctcggacctctgcccgtgggctgggaggtcaggagc
accgtgtcgggtcgcatctactttgtggaccacaacaacagaacaacacaattcacagac
ccacgtctacacaccatcattagccagcaatctcaagtaaaagaatcctcccaaaccccc
cagatggacgtggggggtgaggatgggggaggtggtggagtgggtggcagcagcggtggc
ggagatggtgacatggcggcacgttacgagagagacctggtgcataagctgaagctgctt
cggcacgagctctccctgcagcagcctcaggcgggacactgtcgcatcgaggtgtcacga
gaggagatctttgaggagtcctaccggcaaataatgaagatgagacccaaagacttgaag
aagaggctgatggtgaagttcaggggggaagagggcctggactacggcggggtggccagg
gagtggctgtacctgctgtgccacgaaatgttgaatccttattatggcctgtttcagtac
tccacagacaatatctacacactacagatcaaccctgactcctccatcaaccctgaccat
ctgtcatatttccattttgtgggtcgtgtcatgggcctggcagtttttcacggtcactac
atcaacggcagcttcacgttgcccttttacaaacagctgctgggcaaaccaatccagctg
aacgacctggagaccactgaccccgagttgcacaagagcctcgtctggatattagagaac
gacatcacctcagttctcgaccatacgttctgcgtggagcacaatgcctttgggaagttc
tcccaacacgaactcaaacctaacgggcgtaatatccctgttactgaagagaacaagaag
gaatatgtgagactttatgtgaactggagattcatgcgagggattgaagcccagtttctg
gctctgcagaagggattcagtgaacttatccctcagcacctcctcaaaccctttgaccat
aaagaacttgagctgatcatcggtggactcgggaagattgatctggcggactggaaaaca
aacacacgactaaaacactgcacaagcgaaagcaacgtggtgcggtggttctggcaggcg
gtggaggctttcagtgaggagaggagagggcgcctcctccagttcgtcacaggctccacc
agagtcccactacaggggttcaaagcactgcagggctctacaggttctgcaggaccaagg
ctcttcaccatacacctgatagacgccaacacagataatctgcccaaggctcacacgtgt
ttcaacagaatagacatcccgccgtacgagtcttacgagaagctctacgagaaactgctg
acggccgtggaggagacctgcggcttcgctgtggagtga
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