Cynoglossus semilaevis (tongue sole): 103393309
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Entry
103393309 CDS
T04866
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103393309 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103393309 (cpsf4)
03019 Messenger RNA biogenesis [BR:
csem03019
]
103393309 (cpsf4)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103393309 (cpsf4)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103393309 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
103393309
NCBI-ProteinID:
XP_008328449
UniProt:
A0A3P8WQL7
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All DBs
Position
17:11896437..11899217
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AA seq
265 aa
AA seq
DB search
MQDLLANVDHIKFDLEIAVEQQHGAQPLPFPGMDKSGSAVCEFFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPQQNMNQTKPVPILGRSSVSLIQLTNSSPAQRQQNHSGGVFPQNNMMGQRGPRPLDQVT
CYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctactggctaacgtggaccacatcaagtttgacctggagatcgccgtggag
caacagcatggagcgcagcctcttcctttccctggcatggacaaatccggttctgctgtg
tgcgagttcttcatgagagcagcgtgtgtaaaaggtgggatgtgtccgtttcgtcacatc
agtggagagaagacagttgtctgtaagcactggctgagaggactgtgtaaaaaaggggac
cagtgcgagtttctccatgaatacgacatgaccaagatgcctgaatgttacttctactcc
aagtttggtgagtgtagcaacaaggaatgtccgttcctgcacatcgatccagagtctaag
ataaaagactgtccctggtatgacagaggcttctgcaaacatggtcctgactgcagacac
aggcacacgagacgagtgatctgtgtgaattatctggtgggattttgtccagaagggaaa
tcttgtaaatttatgcaccctcgttttgagttaccaatgggagcatctgaacaacctcct
ctaccacagcagaacatgaaccaaaccaagcctgtgcccatcctcggtcggtcgtcggtc
tctttaattcagttgaccaactccagtccggcccagcggcagcagaatcactcaggaggt
gtttttccacagaacaacatgatgggccagagaggacctcgtccactggaccaggtcacc
tgctacaagtgtggagagaagggccactatgccaacaaatgcacaaaaggtcacttggcc
ttcctcagcggtcagtaa
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