Cynoglossus semilaevis (tongue sole): 103393339
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Entry
103393339 CDS
T04866
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem00260
Glycine, serine and threonine metabolism
csem00630
Glyoxylate and dicarboxylate metabolism
csem00670
One carbon pool by folate
csem01100
Metabolic pathways
csem01200
Carbon metabolism
csem01230
Biosynthesis of amino acids
csem01240
Biosynthesis of cofactors
csem04981
Folate transport and metabolism
Module
csem_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103393339 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103393339 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103393339 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103393339 (shmt1)
Enzymes [BR:
csem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103393339 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
103393339
NCBI-ProteinID:
XP_008328490
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Position
17:complement(12219150..12224667)
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AA seq
482 aa
AA seq
DB search
MSSTNSSTVSQETWESHNKMMLEPLAINDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDPEKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNSETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYARMKQIAVENGAYLLADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGVRSVDAKGKETMYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQMQVLDNCKVLSNALIDHGYKIVTGGSDTHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVQHDFRKVA
DFIHRGIELTLEVQRSLDPKAPLKEFVQALSQEEKFQQRAAEIRAEVETFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacaaacagttccaccgtcagtcaagaaacgtgggagtctcacaacaagatg
atgcttgaacctctggccatcaacgattctgaggttttctcaatcatcaaaaaagagaaa
cacaggcagacgtatggcctggagctgattgcgtctgagaactttgccagcagagctgtt
ctggaggctctgggttcatgtatgaacaacaagtattcagagggatatcctggacagagg
tattatggtggaacagagcatgtggatgagctggagagactttgtcagaagagagcactg
gaggcctacggtctggacccagagaaatggggtgtaaacgttcagccatactcaggttct
cccgctaactttgctgtctacacggcactcgttgagccccatggtaggatcatgggactt
gaccttcctgatggaggtcacctgacacatggcttcatgacagagaagaagaaaatttca
gcaacgtctatcttttttgagtccatgccgtacaaggtgaattcggagactggttatatc
gactacgacagactgcaagaaaatgcacgactgtttcatcctaaactcatcattgcggga
acaagctgctactcccgtaaccttgactacgctcgcatgaagcagattgctgtggagaat
ggtgcgtacctgttggcggacatggctcacatcagtggtctggtggctgccggtgtcgta
ccctcaccttttgaacactgtgacattgtttccaccacaacccacaagacactgcgtggc
tgccgtgctggaatgatcttctacaggaaaggcgtccggagcgttgatgcaaaggggaag
gagaccatgtacaacctggagtctctgatcaatcaggcagtctttcctggactgcaggga
ggacctcacaaccatgccatagctggtgttgctgttgctctcaaacaagccatgactcca
gaattcaaagcctatcagatgcaggttcttgataactgcaaagttctgtccaatgctctg
attgatcacggctacaagatcgtcaccggcggctccgacactcacctgatcctgctggac
ctgcgcagcaagggaaccgatggaggacgagctgagaaggttctggaagcctgtgccatc
gcctgtaataagaacacctgtccaggggacaaaagtgctttgcgtcccagtggtctgagg
tttggctccccagctctgacctccagaggtttggtacaacatgacttcaggaaagtagct
gacttcattcacaggggcatcgagttgaccttggaggtgcaaagaagcctggatcccaag
gctcctctgaaggagtttgtccaagctctgtcccaggaggagaagttccagcagagagca
gctgagatcagggcagaggtggagacttttgctggtcagttcccaatgcctggcctacct
gaactgtag
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