KEGG   Cynoglossus semilaevis (tongue sole): 103393354
Entry
103393354         CDS       T04866                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103393354
   03036 Chromosome and associated proteins [BR:csem03036]
    103393354
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103393354
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    103393354
SSDB
Motif
Pfam: TNRC6-PABC_bdg RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 103393354
NCBI-ProteinID: XP_008328513
LinkDB
Position
17:complement(12463717..12477248)
AA seq 2081 aa
MEDKKKKKEDKKKKETSQKVPEQKIKVPESAKPSCSQPLSSPGSVSPSPGPAAPSSSSSP
GAAVVSAQVPPGGGNNAKQRTAVANGQPSSSSPSGSQPSQQRYMSREVPPRFRCQQDHKV
LLKRGQPPLSSMLVGGGGGEGGMAGGGGSGWATTPPVSTQGADNANASTAGGADPNQTLF
SPSPPNSSPSSCVAALSSSTTTTTTTYANSTWGAGSGSQSSSQGCGTVIVDGTDLEEWPS
ILGGDKLSSDVGGGGTQEPDCLGNNNNSSASWSERNIQQKGGTAGRAEGAGNVDSSSPTR
SSPPSFSSSLSECVQTSDVWGSSTSSQVETGLGSAAFYNSKVSHLLPGPQEGPASGGSSS
SSDPGANLNPNMNPSAWPCLGQGGTSSSAKNSLPLHSSITSASSFSASTALISTHPHSSV
NQTSLHQQHTDKAAAVRGGEPPPPPQQQQPQQQQPQQQQPSNPGLELGSGEGAGEGEGPN
QEGDNSGGCGVDGVEEEGKSKHCGTSSSSLAAAASSSSSWRPMPSASSDLSAGTSVAEGW
VGAGTSSQGQEGNVWAFGNQDEKAGWGRGSEGGSNTQVVSQGAWKGGSPDADWGGAGAAA
GVSSSNIAIGRGREGDESSSSSSSGGGGGGGGSALQDSASPKFETMTKAWDNQTGMESGE
GAVWEWGSGEGGQAEGAGGGSGGGGPSGPSSSSGGGSIAGSGGEGSESGSGKQAQSSSLH
HSKQTSTEVAEVALNSMLSRSDLDPRVLSNMGWGQTQIRQNVAWDVDVNAAKGKRSEGSA
SSSSAFSSASLNTTSTCGPSYPANTSSVTNDSPSGSHTTTLNTAVVNKGGWEGGAVRKPA
PSEEDFKSSQGRAAGGWGDPSPETQGKSWGSEEQSWRDYRGAAGGNRRNIGEQGSNWTEG
PEDKGTGAWKGTGRGEAGGWGGDWGQRDSVPGGGWGDGQSRGGSSSEGSSWTNMDEVASK
RSGWEGGSASGGQSHQDWGSSNPHPSATQKPNIQVVPMKTPNQQQHQSQGQQPPGPMQGG
WSGRANVGGGGPPSKNHNQSSGWTAGPIPQISGGDSLEPSGWEEPSPQSISRKMDIDDGT
SAWGDPTRYNSKNVNLWDKNSATPSQSHGQQVPPPGMQQQQQQQQQQQPQPQQQQQPPRR
QQAMQHSRDTNTRTGSVGMWGGGTQSLDNGTAAWGQTSDAATGWGEPDEPSKGSGWRNPS
PNPVKTGNKPVESWGGKTEGSVAASRHSSWDEEEDSGGGVWNSTGSQGNSSSFNSGGWGH
AHGGKRGNIKSGGGDSWMNPVSRQFSNMGLLGDELNEDKKIEDKRGMSDYNGEMRRGGRG
GGYRMPASKDMGSVDMGSYGDKMSGHGVYVGSGGGMAQPRGMHQPGLHPMSSQGLRAQVP
HQFLSPQVPSPMLKQMPSQGSSVVGGVGPVAGVGNVGGVGGVGGGVFPPQISPQQLAMLS
NIYPHVQQFHLACQLLLQQQQQQQQQQLLQNQRKFAQPQSLRQQTDPQQLARIMAILQQQ
RQHQQGGVGGAAGGGSSKLSPTHLGGKQPMVDPLSHSGIGGHLSDLHAKTQGMYSGLELG
SMIGGMKDTGGQQSRFKWMMEGHSPAPSPPDTTLHKNGPLPSALKVRGGSPYSQYELLGG
DGLGIPPQASTDNWQRTPGSKMGNKPATSSWPPEFQPGVPWKGIQSGGDPESDPYMTPGS
VLNSPGPTSLNDSDHQLLRDNIGPNPSLNTSLPSPGAWPYSASDSPLSNAHSAGKYSEYK
PSWPPEPIGQNKFWKTNRSGIQLPRPPPGLTNQKQASSSPWSSGGPRLARSWGGGGINQE
SRFGPGSAWSDSGASRSSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIR
YSSRQEAAKAQGALHMCVLGNTTILAEFVTEEEVARYFAHSQTSGAEEVGSGGAPSAGLQ
GSSGSGAAVANSGGSSPGSEQAPASTTAGGNGSGSSGGGGGGGVEGGGGAAAVLGSVRSS
SSGWQSLDGTGGSSDSSTGQGPGLGMFSQWSTNGSGEGGGAGGVVGVGGVEAGRSGLWGG
MTAGYPGSSLWGAPQMEERHQMDSPAALLPGDLLGGGADSI
NT seq 6246 nt   +upstreamnt  +downstreamnt
atggaagacaagaaaaagaagaaagaagacaaaaagaaaaaagaaacatctcaaaaggtg
ccagaacagaaaatcaaagtgccagaatcagccaaaccctcctgctcccagcccctctcc
agcccaggctcagtgtcccccagccctggccccgctgctccctcctcttcctcaagtcct
ggtgcagctgtggtttctgcacaagtccctcctggtggcgggaacaatgcaaagcagcgg
actgctgtggccaacggacagccctcctcctcctccccttcaggaagccagccctcccaa
cagagatacatgtccagagaagttccgcccaggtttcgctgccagcaggaccacaaagtg
ttactgaagaggggccagccaccgctgtcctccatgctggtggggggtggcggaggggaa
gggggcatggctggaggcggaggcagtggatgggcaaccactccacctgtttccacacaa
ggagcagataacgctaatgcaagcacagctggaggtgcagatccgaatcagaccttattc
tccccctcacctcccaactcctctccttcatcatgtgttgctgctctgtcttcttctact
actactactactacaacttatgcaaattccacttggggggcaggctctggcagccagtcc
tcttctcagggctgcggaacagtgattgtggatggaactgacctggaggagtggccaagc
atcctcggcggcgacaagttgagttctgacgtgggcggaggtgggacgcaggagccagac
tgcctcggtaacaacaacaacagtagtgcctcatggagcgagagaaacatccagcagaag
ggaggaacagcaggaagggcagaaggagcggggaacgtggacagttcttccccgactcgg
tcttctccgccttccttctcttcctcacttagtgaatgtgttcagacaagtgatgtgtgg
ggctcctccacctcctcccaggtggagacagggctgggatcagcagcattttacaattcc
aaagtctcccatcttctaccagggcctcaggaaggccccgcgagtggcggcagcagcagc
agcagtgaccctggtgccaatttgaaccccaacatgaacccctccgcctggccctgcctg
gggcagggtgggacatcgagttcagctaaaaacagccttccactgcactcatccatcact
tcagcttcttcattctctgccagcactgccctcatctccactcatcctcattcatctgtg
aatcaaaccagtcttcatcagcagcacactgacaaagccgctgcagtccgaggtggagaa
ccaccaccaccacctcagcagcagcagccgcagcagcagcagccgcagcagcagcagccg
tcgaacccagggctggagctgggttcaggtgagggagcaggagaaggagaaggaccaaat
caagaaggtgacaacagtgggggctgtggggttgatggtgtcgaagaagaaggaaagagt
aaacattgtggcacctcgtcttcctctttagccgccgccgcctcctcctcctcctcgtgg
agacccatgccctcggcctcctctgaccttagtgcaggtacgtcagtggcagagggatgg
gttggagcagggaccagttctcaaggacaggaagggaacgtgtgggcctttggtaaccag
gatgagaaagcagggtggggaaggggaagtgaaggtggttcaaatacccaggtggtatct
cagggagcgtggaagggaggcagtcctgacgcggactggggcggggcaggcgcagcagcg
ggggtaagttcgagcaacatagcaataggacgtggaagagaaggagatgagagcagcagc
agcagcagcagtggaggtggaggtggtggtggaggcagtgctttacaggattctgcttca
ccaaagtttgaaactatgacaaaagcttgggacaatcagacggggatggagagtggggaa
ggggcagtttgggagtggggtagtggagagggagggcaggctgaaggagctggaggtgga
agcggaggcggaggaccttcaggcccttcatcttccagtggtggaggctccatagctgga
agtggtggagaagggagtgagagtgggagcggtaaacaggcccagtcctcttctttgcac
cactctaagcaaacctccacggaagtggctgaagtggccttaaatagcatgctgagtcgg
tcagacctggaccccagggtactgtccaacatggggtgggggcagacccagattcgacag
aacgtggcgtgggacgtcgatgtgaacgcagcaaaaggaaagagaagtgaagggagtgct
tcgtcgagctctgcgttttcatcagcatctctaaacactaccagtacctgtggtcctagc
tatccagctaacaccagttctgtaactaatgactcgccttctggcagccacaccaccact
ttaaatactgcagtggtgaacaaggggggctgggagggcggtgctgtgagaaaaccagcc
ccgtcagaagaggatttcaagagcagccaaggtagagcagccggaggctggggagatccc
tcacctgaaacccagggcaaaagttgggggagtgaggagcagagttggagggattacaga
ggagcagcgggaggaaacaggcgaaacattggagaacagggtagtaattggaccgagggt
ccagaagataaggggacaggggcatggaaaggcactgggagaggggaggcaggaggttgg
ggtggagactggggacagagagactctgtacctggaggtgggtggggagatggacagagc
cgaggtggaagcagctccgagggatcctcctggactaacatggacgaggtggcgtcaaag
cgatcaggatgggagggaggcagtgcaagtggaggtcaatcccaccaggactgggggagt
tccaaccctcatccgtcagcaacccaaaaaccaaacatccaagtggtaccaatgaaaact
ccaaatcagcagcagcaccaatcacagggccagcagcctcccggtccaatgcagggtgga
tggagcggccgggccaacgttggaggagggggtccaccttccaagaatcacaaccaaagt
tcgggttggaccgctgggccaatcccccaaatctctggcggggacagtctggagcccagc
ggctgggaagaaccctcacctcagtccatcagccgaaagatggatatcgacgatggcact
tcagcctggggagacccgacccgctacaacagcaagaatgtgaacttgtgggacaagaac
agtgccacacccagccaaagccacggtcagcaggtgccgcctccaggcatgcagcaacaa
caacaacaacaacaacaacaacaaccacaaccacaacaacagcaacagccacccaggagg
caacaggccatgcagcacagcagagacacaaacactcgcactggttcagttggtatgtgg
gggggcggtacacagtctctggataacggtacagctgcgtggggtcagacatcagatgca
gcaactggttggggggaaccagatgaacccagtaaaggttctggctggaggaacccttca
cccaaccctgttaaaactggcaacaaaccagtggaaagctggggtggaaagacagaaggc
tctgtcgcagcctcccgtcattcaagctgggacgaggaggaggacagtggagggggggtc
tggaacagcactggctcacaaggaaacagctcctccttcaactctggaggctggggtcat
gctcacggagggaaaaggggcaacatcaagagtggaggtggagacagttggatgaacccc
gtttcacgccagttttcaaacatgggccttttgggtgacgaattaaatgaggacaaaaag
attgaagacaaaagaggaatgtctgattataatggggagatgcgccggggaggacgaggt
ggaggctaccgcatgcctgcatccaaagacatggggtctgttgacatggggtcgtatgga
gataagatgagcggccacggagtgtatgtcggcagcggtggagggatggctcaacctcgt
gggatgcaccaacctggcctgcacccgatgagctcccaggggttacgtgctcaagtgcct
catcagttcctgtctccgcaggtgccgagtcccatgctgaagcagatgccgtcccaaggc
agcagcgttgttggaggagtgggacccgtggctggcgttggaaacgtgggaggagtgggt
ggtgttggtggaggagtgttcccaccacaaatatccccccagcagcttgccatgctcagc
aacatttaccctcacgtgcagcagttccatctggcttgtcagcttctactacaacagcag
cagcagcagcagcaacagcagctcctacagaaccagaggaagtttgctcagcctcagtct
ctcaggcagcagacagacccacagcagctggcaaggattatggctatcctgcagcagcag
cggcagcatcagcagggtggagttggaggagcagcagggggaggaagctccaaactgtcg
cccactcacctgggaggaaaacagcctatggttgaccctctctcccattctggaatagga
ggacatttatcagacctgcacgccaaaacacaagggatgtactctgggctggagctcggt
tccatgatcggagggatgaaggacacgggaggacagcagtcccgtttcaaatggatgatg
gagggccactcaccggctccgtcgccccctgacaccacacttcacaagaacggccctcta
ccgagcgctctgaaggtgagaggaggatccccgtactcccagtacgagttgctgggcggt
gatggtttaggaattccaccacaggcctccacagacaactggcaacgaactccaggcagt
aaaatgggaaacaagccggccacgtccagctggcctccagagttccagcccggtgttccc
tggaagggaatccagagtggtggagacccagagtctgacccctacatgacccctggtagc
gttctgaactctccaggacccacaagtctcaacgactctgaccaccagttactgcgagac
aacatagggccaaacccctctctcaacacctcactgccttcaccaggtgcctggccctac
agtgcctcagacagtcccctcagcaatgcacacagcgcaggaaagtactcggagtacaag
cccagctggcccccagagcccatcggacaaaacaaattttggaagaccaatcgcagcggc
atacagctgccacgcccccctcctggcttaactaatcagaaacaggcctcgtcctccccc
tggagtagtggaggcccacggttggcccggagctggggaggaggtggaattaatcaggag
tcgagattcgggccaggctcagcttggagcgacagtggggcttccaggagcagctgctgg
ttactcctgagcaatctgaccccgcagattgatggatccacactgaggaccatctgcatg
cagcacggccccctcctcaccttccaccttggcctgacacagggcagtgctctgattcgc
tacagcagccgacaggaagctgccaaggcccagggtgcactgcacatgtgtgttctgggc
aacacaacaatcctggcggagtttgtgactgaggaagaagttgctcgctattttgcacat
tcccagaccagtggggcagaagaggtcggctcaggaggagctccatctgctggactgcag
ggttcctctggttcaggcgctgctgtggccaacagtggaggcagctccccgggcagcgag
caggcaccagcgagtacgactgcaggaggaaatggaagtggcagcagcggcggtggagga
ggaggaggagtggagggaggaggaggagcagcagctgttctcggaagtgtgaggtcctcc
agctctgggtggcaaagtcttgacggtacaggcggttcttcagactcctctacaggtcaa
ggacctgggttggggatgttttcccaatggagcacaaatgggtcaggggagggtggagga
gcaggaggggtcgtgggagtggggggggtcgaggccggcagatctggcttgtgggggggc
atgactgctgggtaccccggcagcagtctgtggggggcaccccaaatggaggagaggcac
caaatggacagccccgctgcattattacctggtgacctgctgggaggaggagcagattcc
atctga

DBGET integrated database retrieval system