Cynoglossus semilaevis (tongue sole): 103393354
Help
Entry
103393354 CDS
T04866
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103393354
03036 Chromosome and associated proteins [BR:
csem03036
]
103393354
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103393354
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103393354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
103393354
NCBI-ProteinID:
XP_008328513
LinkDB
All DBs
Position
17:complement(12463717..12477248)
Genome browser
AA seq
2081 aa
AA seq
DB search
MEDKKKKKEDKKKKETSQKVPEQKIKVPESAKPSCSQPLSSPGSVSPSPGPAAPSSSSSP
GAAVVSAQVPPGGGNNAKQRTAVANGQPSSSSPSGSQPSQQRYMSREVPPRFRCQQDHKV
LLKRGQPPLSSMLVGGGGGEGGMAGGGGSGWATTPPVSTQGADNANASTAGGADPNQTLF
SPSPPNSSPSSCVAALSSSTTTTTTTYANSTWGAGSGSQSSSQGCGTVIVDGTDLEEWPS
ILGGDKLSSDVGGGGTQEPDCLGNNNNSSASWSERNIQQKGGTAGRAEGAGNVDSSSPTR
SSPPSFSSSLSECVQTSDVWGSSTSSQVETGLGSAAFYNSKVSHLLPGPQEGPASGGSSS
SSDPGANLNPNMNPSAWPCLGQGGTSSSAKNSLPLHSSITSASSFSASTALISTHPHSSV
NQTSLHQQHTDKAAAVRGGEPPPPPQQQQPQQQQPQQQQPSNPGLELGSGEGAGEGEGPN
QEGDNSGGCGVDGVEEEGKSKHCGTSSSSLAAAASSSSSWRPMPSASSDLSAGTSVAEGW
VGAGTSSQGQEGNVWAFGNQDEKAGWGRGSEGGSNTQVVSQGAWKGGSPDADWGGAGAAA
GVSSSNIAIGRGREGDESSSSSSSGGGGGGGGSALQDSASPKFETMTKAWDNQTGMESGE
GAVWEWGSGEGGQAEGAGGGSGGGGPSGPSSSSGGGSIAGSGGEGSESGSGKQAQSSSLH
HSKQTSTEVAEVALNSMLSRSDLDPRVLSNMGWGQTQIRQNVAWDVDVNAAKGKRSEGSA
SSSSAFSSASLNTTSTCGPSYPANTSSVTNDSPSGSHTTTLNTAVVNKGGWEGGAVRKPA
PSEEDFKSSQGRAAGGWGDPSPETQGKSWGSEEQSWRDYRGAAGGNRRNIGEQGSNWTEG
PEDKGTGAWKGTGRGEAGGWGGDWGQRDSVPGGGWGDGQSRGGSSSEGSSWTNMDEVASK
RSGWEGGSASGGQSHQDWGSSNPHPSATQKPNIQVVPMKTPNQQQHQSQGQQPPGPMQGG
WSGRANVGGGGPPSKNHNQSSGWTAGPIPQISGGDSLEPSGWEEPSPQSISRKMDIDDGT
SAWGDPTRYNSKNVNLWDKNSATPSQSHGQQVPPPGMQQQQQQQQQQQPQPQQQQQPPRR
QQAMQHSRDTNTRTGSVGMWGGGTQSLDNGTAAWGQTSDAATGWGEPDEPSKGSGWRNPS
PNPVKTGNKPVESWGGKTEGSVAASRHSSWDEEEDSGGGVWNSTGSQGNSSSFNSGGWGH
AHGGKRGNIKSGGGDSWMNPVSRQFSNMGLLGDELNEDKKIEDKRGMSDYNGEMRRGGRG
GGYRMPASKDMGSVDMGSYGDKMSGHGVYVGSGGGMAQPRGMHQPGLHPMSSQGLRAQVP
HQFLSPQVPSPMLKQMPSQGSSVVGGVGPVAGVGNVGGVGGVGGGVFPPQISPQQLAMLS
NIYPHVQQFHLACQLLLQQQQQQQQQQLLQNQRKFAQPQSLRQQTDPQQLARIMAILQQQ
RQHQQGGVGGAAGGGSSKLSPTHLGGKQPMVDPLSHSGIGGHLSDLHAKTQGMYSGLELG
SMIGGMKDTGGQQSRFKWMMEGHSPAPSPPDTTLHKNGPLPSALKVRGGSPYSQYELLGG
DGLGIPPQASTDNWQRTPGSKMGNKPATSSWPPEFQPGVPWKGIQSGGDPESDPYMTPGS
VLNSPGPTSLNDSDHQLLRDNIGPNPSLNTSLPSPGAWPYSASDSPLSNAHSAGKYSEYK
PSWPPEPIGQNKFWKTNRSGIQLPRPPPGLTNQKQASSSPWSSGGPRLARSWGGGGINQE
SRFGPGSAWSDSGASRSSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIR
YSSRQEAAKAQGALHMCVLGNTTILAEFVTEEEVARYFAHSQTSGAEEVGSGGAPSAGLQ
GSSGSGAAVANSGGSSPGSEQAPASTTAGGNGSGSSGGGGGGGVEGGGGAAAVLGSVRSS
SSGWQSLDGTGGSSDSSTGQGPGLGMFSQWSTNGSGEGGGAGGVVGVGGVEAGRSGLWGG
MTAGYPGSSLWGAPQMEERHQMDSPAALLPGDLLGGGADSI
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagacaaaaagaaaaaagaaacatctcaaaaggtg
ccagaacagaaaatcaaagtgccagaatcagccaaaccctcctgctcccagcccctctcc
agcccaggctcagtgtcccccagccctggccccgctgctccctcctcttcctcaagtcct
ggtgcagctgtggtttctgcacaagtccctcctggtggcgggaacaatgcaaagcagcgg
actgctgtggccaacggacagccctcctcctcctccccttcaggaagccagccctcccaa
cagagatacatgtccagagaagttccgcccaggtttcgctgccagcaggaccacaaagtg
ttactgaagaggggccagccaccgctgtcctccatgctggtggggggtggcggaggggaa
gggggcatggctggaggcggaggcagtggatgggcaaccactccacctgtttccacacaa
ggagcagataacgctaatgcaagcacagctggaggtgcagatccgaatcagaccttattc
tccccctcacctcccaactcctctccttcatcatgtgttgctgctctgtcttcttctact
actactactactacaacttatgcaaattccacttggggggcaggctctggcagccagtcc
tcttctcagggctgcggaacagtgattgtggatggaactgacctggaggagtggccaagc
atcctcggcggcgacaagttgagttctgacgtgggcggaggtgggacgcaggagccagac
tgcctcggtaacaacaacaacagtagtgcctcatggagcgagagaaacatccagcagaag
ggaggaacagcaggaagggcagaaggagcggggaacgtggacagttcttccccgactcgg
tcttctccgccttccttctcttcctcacttagtgaatgtgttcagacaagtgatgtgtgg
ggctcctccacctcctcccaggtggagacagggctgggatcagcagcattttacaattcc
aaagtctcccatcttctaccagggcctcaggaaggccccgcgagtggcggcagcagcagc
agcagtgaccctggtgccaatttgaaccccaacatgaacccctccgcctggccctgcctg
gggcagggtgggacatcgagttcagctaaaaacagccttccactgcactcatccatcact
tcagcttcttcattctctgccagcactgccctcatctccactcatcctcattcatctgtg
aatcaaaccagtcttcatcagcagcacactgacaaagccgctgcagtccgaggtggagaa
ccaccaccaccacctcagcagcagcagccgcagcagcagcagccgcagcagcagcagccg
tcgaacccagggctggagctgggttcaggtgagggagcaggagaaggagaaggaccaaat
caagaaggtgacaacagtgggggctgtggggttgatggtgtcgaagaagaaggaaagagt
aaacattgtggcacctcgtcttcctctttagccgccgccgcctcctcctcctcctcgtgg
agacccatgccctcggcctcctctgaccttagtgcaggtacgtcagtggcagagggatgg
gttggagcagggaccagttctcaaggacaggaagggaacgtgtgggcctttggtaaccag
gatgagaaagcagggtggggaaggggaagtgaaggtggttcaaatacccaggtggtatct
cagggagcgtggaagggaggcagtcctgacgcggactggggcggggcaggcgcagcagcg
ggggtaagttcgagcaacatagcaataggacgtggaagagaaggagatgagagcagcagc
agcagcagcagtggaggtggaggtggtggtggaggcagtgctttacaggattctgcttca
ccaaagtttgaaactatgacaaaagcttgggacaatcagacggggatggagagtggggaa
ggggcagtttgggagtggggtagtggagagggagggcaggctgaaggagctggaggtgga
agcggaggcggaggaccttcaggcccttcatcttccagtggtggaggctccatagctgga
agtggtggagaagggagtgagagtgggagcggtaaacaggcccagtcctcttctttgcac
cactctaagcaaacctccacggaagtggctgaagtggccttaaatagcatgctgagtcgg
tcagacctggaccccagggtactgtccaacatggggtgggggcagacccagattcgacag
aacgtggcgtgggacgtcgatgtgaacgcagcaaaaggaaagagaagtgaagggagtgct
tcgtcgagctctgcgttttcatcagcatctctaaacactaccagtacctgtggtcctagc
tatccagctaacaccagttctgtaactaatgactcgccttctggcagccacaccaccact
ttaaatactgcagtggtgaacaaggggggctgggagggcggtgctgtgagaaaaccagcc
ccgtcagaagaggatttcaagagcagccaaggtagagcagccggaggctggggagatccc
tcacctgaaacccagggcaaaagttgggggagtgaggagcagagttggagggattacaga
ggagcagcgggaggaaacaggcgaaacattggagaacagggtagtaattggaccgagggt
ccagaagataaggggacaggggcatggaaaggcactgggagaggggaggcaggaggttgg
ggtggagactggggacagagagactctgtacctggaggtgggtggggagatggacagagc
cgaggtggaagcagctccgagggatcctcctggactaacatggacgaggtggcgtcaaag
cgatcaggatgggagggaggcagtgcaagtggaggtcaatcccaccaggactgggggagt
tccaaccctcatccgtcagcaacccaaaaaccaaacatccaagtggtaccaatgaaaact
ccaaatcagcagcagcaccaatcacagggccagcagcctcccggtccaatgcagggtgga
tggagcggccgggccaacgttggaggagggggtccaccttccaagaatcacaaccaaagt
tcgggttggaccgctgggccaatcccccaaatctctggcggggacagtctggagcccagc
ggctgggaagaaccctcacctcagtccatcagccgaaagatggatatcgacgatggcact
tcagcctggggagacccgacccgctacaacagcaagaatgtgaacttgtgggacaagaac
agtgccacacccagccaaagccacggtcagcaggtgccgcctccaggcatgcagcaacaa
caacaacaacaacaacaacaacaaccacaaccacaacaacagcaacagccacccaggagg
caacaggccatgcagcacagcagagacacaaacactcgcactggttcagttggtatgtgg
gggggcggtacacagtctctggataacggtacagctgcgtggggtcagacatcagatgca
gcaactggttggggggaaccagatgaacccagtaaaggttctggctggaggaacccttca
cccaaccctgttaaaactggcaacaaaccagtggaaagctggggtggaaagacagaaggc
tctgtcgcagcctcccgtcattcaagctgggacgaggaggaggacagtggagggggggtc
tggaacagcactggctcacaaggaaacagctcctccttcaactctggaggctggggtcat
gctcacggagggaaaaggggcaacatcaagagtggaggtggagacagttggatgaacccc
gtttcacgccagttttcaaacatgggccttttgggtgacgaattaaatgaggacaaaaag
attgaagacaaaagaggaatgtctgattataatggggagatgcgccggggaggacgaggt
ggaggctaccgcatgcctgcatccaaagacatggggtctgttgacatggggtcgtatgga
gataagatgagcggccacggagtgtatgtcggcagcggtggagggatggctcaacctcgt
gggatgcaccaacctggcctgcacccgatgagctcccaggggttacgtgctcaagtgcct
catcagttcctgtctccgcaggtgccgagtcccatgctgaagcagatgccgtcccaaggc
agcagcgttgttggaggagtgggacccgtggctggcgttggaaacgtgggaggagtgggt
ggtgttggtggaggagtgttcccaccacaaatatccccccagcagcttgccatgctcagc
aacatttaccctcacgtgcagcagttccatctggcttgtcagcttctactacaacagcag
cagcagcagcagcaacagcagctcctacagaaccagaggaagtttgctcagcctcagtct
ctcaggcagcagacagacccacagcagctggcaaggattatggctatcctgcagcagcag
cggcagcatcagcagggtggagttggaggagcagcagggggaggaagctccaaactgtcg
cccactcacctgggaggaaaacagcctatggttgaccctctctcccattctggaatagga
ggacatttatcagacctgcacgccaaaacacaagggatgtactctgggctggagctcggt
tccatgatcggagggatgaaggacacgggaggacagcagtcccgtttcaaatggatgatg
gagggccactcaccggctccgtcgccccctgacaccacacttcacaagaacggccctcta
ccgagcgctctgaaggtgagaggaggatccccgtactcccagtacgagttgctgggcggt
gatggtttaggaattccaccacaggcctccacagacaactggcaacgaactccaggcagt
aaaatgggaaacaagccggccacgtccagctggcctccagagttccagcccggtgttccc
tggaagggaatccagagtggtggagacccagagtctgacccctacatgacccctggtagc
gttctgaactctccaggacccacaagtctcaacgactctgaccaccagttactgcgagac
aacatagggccaaacccctctctcaacacctcactgccttcaccaggtgcctggccctac
agtgcctcagacagtcccctcagcaatgcacacagcgcaggaaagtactcggagtacaag
cccagctggcccccagagcccatcggacaaaacaaattttggaagaccaatcgcagcggc
atacagctgccacgcccccctcctggcttaactaatcagaaacaggcctcgtcctccccc
tggagtagtggaggcccacggttggcccggagctggggaggaggtggaattaatcaggag
tcgagattcgggccaggctcagcttggagcgacagtggggcttccaggagcagctgctgg
ttactcctgagcaatctgaccccgcagattgatggatccacactgaggaccatctgcatg
cagcacggccccctcctcaccttccaccttggcctgacacagggcagtgctctgattcgc
tacagcagccgacaggaagctgccaaggcccagggtgcactgcacatgtgtgttctgggc
aacacaacaatcctggcggagtttgtgactgaggaagaagttgctcgctattttgcacat
tcccagaccagtggggcagaagaggtcggctcaggaggagctccatctgctggactgcag
ggttcctctggttcaggcgctgctgtggccaacagtggaggcagctccccgggcagcgag
caggcaccagcgagtacgactgcaggaggaaatggaagtggcagcagcggcggtggagga
ggaggaggagtggagggaggaggaggagcagcagctgttctcggaagtgtgaggtcctcc
agctctgggtggcaaagtcttgacggtacaggcggttcttcagactcctctacaggtcaa
ggacctgggttggggatgttttcccaatggagcacaaatgggtcaggggagggtggagga
gcaggaggggtcgtgggagtggggggggtcgaggccggcagatctggcttgtgggggggc
atgactgctgggtaccccggcagcagtctgtggggggcaccccaaatggaggagaggcac
caaatggacagccccgctgcattattacctggtgacctgctgggaggaggagcagattcc
atctga
DBGET
integrated database retrieval system