Cynoglossus semilaevis (tongue sole): 103393364
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Entry
103393364 CDS
T04866
Symbol
srebf2
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103393364 (srebf2)
04131 Membrane trafficking [BR:
csem04131
]
103393364 (srebf2)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
103393364 (srebf2)
Membrane trafficking [BR:
csem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103393364 (srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103393364
NCBI-ProteinID:
XP_008328528
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All DBs
Position
17:12581851..12593720
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AA seq
1167 aa
AA seq
DB search
MDNGEYMENMDPTLAVLGDEFTLGDIDEMLQFVSNQVGDLPDLFEDQMTSAGSLQNGTSV
TTHPGIPAPQTLQTPQTQTPSPYQNVNMGLQSTQTLSPQSLPLTPPLTPAQTPSPATVSS
VQHQVTRSPPLLQPRPQLVQPIQPQPQQTAQPTIQMHTQGIPVHTQSFPVHTLVQTHSHS
SLPIQSQAPQTVMITSNGGQSRFIQNPVFCHQSPAQGFQVIQPQMQSIMTSPQLQPLTIQ
HQRVLTQSGQTIQTLSTAPTTVHTVQQQVQQLPVLVQQPQILKTESLVLTTLKPDGTQVL
STMQSPTGITTLTTPIQNTALQVPTLMGSNILTTVPVMMGGGGDKLPIKQLQPGCTGGVR
TNVEQSQVSGVMGPGGVVKEGERRTTHNVIEKRYRSSINDKIVELRDLVMGNDAKMHKSG
VLRKAIDYIKYLQQVNHKLRQENLALKMGNQKNKNVTLSEDMEVKQEIVMMSPPASDSGS
GSPHQFSPYCVDSEPGSPLMDHDQLKSEPDSPSSVGVMDRSRLLLCALTFFCLSLNPLPS
LLGPEEPAAHSLSAGHGPSRTLVWLQGPTQDFASWLRCLLPWVMVWVLSGVGAVWGCVRV
LYLWEPVTPLHSPKSVSFWRHRKQADLHLNRGDYKAAMSSLETCLSVLARALPSTSLDLV
CSLSWNVIRYCLHRPTPLGWLVHQVRGKHEGEEAKTSAKDAALVYHRLSQLQLTGEGGGS
LFSEFWENCTDQSAVSSSQKQRREKNXICPRLLLQGYLLSCAECVVSQTDAKSVPDCLRW
LFTPLGRQFFLSCDWSLQSGNIADIYTSQRDPADPIPQLHRCFCRKLLERAVQTLIQPQS
DSEVNVSKNDSGEFSSAMEFLQLLNSCTEDTPSPRPHFSAPPHHTTTPVGDPVSRWWALV
LKAAVHWLQGDDAAVKSLLTEAERMPRALHTLDHSLPKAVLLHCKAVQMSLSPLKGEGAV
TCLSHCDRASSFLRSSVSVPVSQTGNWLNKGVELLVCDLLLTLRTSLWQRCGSSNGEPGP
AHGAQLAGFQRDLSALRRLTQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHNLRRRA
HNSYSAGELXYIHICVYICIYVCRETTHALLLACRPLPMPLLTPPGHRARLLAEAKRTLE
RVGDRRSLQDCQQILLRLSGGTTIAAS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggagagtacatggagaacatggacccgactttagcggtattgggggacgaa
ttcaccctaggagacatcgacgagatgctgcagtttgtcagcaaccaggtgggggacttg
ccggatctgtttgaagaccagatgacctcagcaggttccttacagaacggaacgagtgtc
acgacccatcccggaattccagcacctcaaactctccaaactccacagacgcagactcct
tccccctaccaaaatgtcaacatgggactacaaagtacccagacactgtctccccagtct
ttacctctcacccctcccctcactcctgctcagactccctcccctgccaccgtctcttcg
gtgcagcatcaggtgacccgcagtcctccgctccttcagccacggcctcagttggtccag
cccatccagcctcagccccaacagacagcccagcccaccatccagatgcacacccaggga
atccctgtccacacccagagtttcccggtccacaccctggtccagacccacagccacagt
tctctgcccattcagtcgcaggcaccacaaaccgtcatgattacctcgaacggtggacag
tctcgcttcatccagaacccagttttctgccatcagagtcctgctcagggtttccaagtc
atccagccccagatgcagagcatcatgacatcaccacaactgcagccattgactattcag
catcagcgtgttctgactcagtctggccaaactatccagactctttccacagcaccaact
acagttcacactgtgcaacagcaggtgcaacaattacctgtcctggtccagcagcctcag
atcctgaagacagagtccctggttctcacgaccctcaaaccagacggcactcaggttctg
tctaccatgcagagtcccacagggatcaccaccttaaccacgcccatccagaacacagct
ctgcaagtcccgacgctcatgggcagcaacatcttgaccaccgtccctgttatgatggga
ggaggcggagacaagctgccaatcaagcagctacagccaggctgcacaggtggagtcaga
acaaatgtggagcagagccaggtctcaggagtcatgggaccaggaggtgtggtgaaggag
ggtgagaggaggacaacccacaacgtcatcgagaagaggtatcggtcttccataaacgac
aaaatcgtggagctgcgtgacctggtcatgggcaacgacgcaaagatgcataagtctgga
gtgctgaggaaggccatcgactacatcaagtacttacaacaggtcaatcacaaactaaga
caagagaaccttgctctcaaaatgggaaaccagaagaacaagaatgttacgctgtctgag
gacatggaagtcaaacaggaaatagtgatgatgtcgcctccagcctcagactctggctct
ggttcccctcaccagttctctccttactgtgtggactcagagccaggcagccccttaatg
gaccatgatcagctgaaaagtgagccagactctccgtcatcggtcggagtgatggatcgc
tcccgactgcttctgtgcgccctgaccttcttctgtctgtccttgaacccccttccttct
ctcctgggcccagaagaaccagcagcccacagcttgtctgcaggccacggcccatctagg
acacttgtttggctccagggtcccacacaggactttgcgtcctggctgcgctgcctgttg
ccctgggtgatggtgtgggtgctgagtggagtgggcgctgtgtggggctgcgtcagggtt
ctctacctgtgggagcctgtcaccccgctgcactccccgaagtctgtgtccttctggagg
catcgcaaacaggctgacctgcatctcaacaggggagattacaaagcagccatgtccagc
ttagagacctgcttgtcggtcttggcgagggcgctcccctcgaccagcctggatctggtc
tgttccctttcctggaacgtgatccgctactgtttgcatcgcccgactccgctgggatgg
ctggttcaccaggtcagagggaagcacgagggcgaggaggccaagacgagcgcaaaggac
gcagctctggtttaccaccgtctgagccagctgcagctgacgggtgagggcggaggaagt
ctcttctcagagttctgggaaaactgcactgatcaatcagcagtttcatcatcacagaaa
cagaggagagagaaaaactgaatctgtcctcgtctcctcctgcagggttacctgttgagc
tgtgcggagtgtgtggtcagtcagacagacgccaagtccgtccctgactgcctgcgctgg
ctcttcaccccactgggcagacagtttttcttgagctgtgattggtcactccagtcaggg
aacattgctgacatctacacctctcagagagacccagccgaccccatcccacagctacac
cgctgcttctgcagaaagcttctggagagagctgttcaaacgctcatccagccgcagagc
gactctgaagtgaacgtatccaagaacgactcgggggaattttccagtgccatggagttc
cttcagttgttgaacagctgtaccgaggacactccctccccacgtcctcatttctcagct
cctccccatcacaccaccaccccagtgggcgatccagtgagtcgctggtgggctttggtc
ctgaaggctgccgttcattggctgcagggtgatgacgccgcagtgaagtctctgctgacg
gaggcggagcggatgccgagagctctgcacacgctagatcactctcttcccaaggctgtg
ttgctgcactgcaaagcagttcagatgagtctgtcacccttaaagggggagggtgcagtg
acctgtctgtcccactgtgaccgagccagcagcttcctgcgctccagcgtctccgtccca
gtctcccaaactgggaactggctgaacaagggggtggagctcctggtctgtgacctcctg
ctgaccttgaggaccagtctgtggcagcgatgtggcagcagcaatggagaaccaggcccg
gctcatggtgcccagttggccggtttccagagggacctgagcgccctgagacgactcacc
cagtgttacagacaggcacaacacaaggtgtttcttcatgaaaccacagtgaggctgatg
gctggtgccagtcccacaaggactcaccagctgctggagcacaacctccggcgcagggca
cacaactcctacagcgcaggtgagctatgatatattcatatatgtgtgtatatatgtata
tatgtgtgtagggaaacgacccacgccctcctcctggcctgcagacccctccctatgccc
ttgctgactccacccgggcaccgtgcccgcctcctggctgaggccaagcgcaccctggag
cgcgtgggagaccgacgctccctccaggactgtcagcagattctgttgcgcctcagtgga
ggcaccaccatagcagcctcctaa
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integrated database retrieval system
