KEGG   Cynoglossus semilaevis (tongue sole): 103393399
Entry
103393399         CDS       T04866                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103393399 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103393399 (thoc6)
   03041 Spliceosome [BR:csem03041]
    103393399 (thoc6)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103393399 (thoc6)
Spliceosome [BR:csem03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103393399 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st EIF3I Beta-prop_CAF1B_HIR1 WDR54 WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_like Beta-prop_SPT8 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 103393399
NCBI-ProteinID: XP_008328578
UniProt: A0A3P8VG00
LinkDB
Position
17:12976816..12988128
AA seq 315 aa
MSVFSQSFSPCGRFLAAGNNYGEIAIFSLSAALSPDATPSNKKPMLTFTAHEGPVFSLVS
TDCHLISAGNGEVCLWNWAELIKKNVSALLRKRPDYKSSLEIPEINSMAVQIRDNSLVIG
AGDNNVHIMDLEHGVFKSVLKGHTDYIHCVCVRERESEILSGGEDGAVRIWDSRTGTVLS
CISVFKYQECARPQLGKWISCLATDSDWMVCGGGPSLSLWHLRSQSPTSVFPLSNSQRSA
TFHQDMILAVGEGPHVSHCLLGGTIRAQIPSVLQSINTLQLNRNSSEHQVLTVGGSSECI
DVFTNLSYRAFSLRF
NT seq 948 nt   +upstreamnt  +downstreamnt
atgtcggtcttctctcaaagtttctccccttgtgggcgattcctcgccgccggaaacaat
tatggagagatcgccatcttcagtctgtctgcagcgctgagtcctgacgccacaccgtcc
aataagaaaccaatgctgacattcaccgcccatgaaggtccagtcttctccctggtctcc
actgactgtcacctaatcagtgcaggtaacggtgaggtctgcctctggaactgggctgag
ctcattaagaagaacgtcagtgctctattgaggaaaagacccgactacaagtcgagtttg
gagattccagaaatcaactccatggcggtccaaatcagagacaacagcctggtcatcggt
gcaggagacaacaacgtccacatcatggacctggaacatggagtttttaagtctgtcctg
aagggacacacagactacatccactgtgtctgtgtgagggaacgagagtctgagatcctg
tcaggtggggaggatggagctgtcaggatctgggacagcaggacgggtacggtcctcagt
tgcatctctgtcttcaagtatcaggaatgtgccaggcctcaacttgggaagtggatcagc
tgtttggccacagactcagactggatggtctgtgggggcggtccttccctgtctctgtgg
catcttcgctctcagtcgcccacatcagtcttccctctctcaaattctcaacgtagcgcc
acctttcatcaggacatgatccttgcagttggcgaaggccctcacgtgtcccactgtctg
ctggggggtacgatacgagctcagatcccatctgtgctgcagagcatcaacacactgcag
ctgaacagaaacagttcggaacaccaggtgctgacagttgggggcagcagtgagtgtata
gatgtcttcactaacttgtcctacagagctttttcactccgtttttga

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