Cynoglossus semilaevis (tongue sole): 103393399
Help
Entry
103393399 CDS
T04866
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103393399 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
103393399 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103393399 (thoc6)
03041 Spliceosome [BR:
csem03041
]
103393399 (thoc6)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103393399 (thoc6)
Spliceosome [BR:
csem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103393399 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_SCAP
CFAP251_N
WD40_Gbeta
TRM82_WD
NBCH_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
WDR54
Beta-prop_WDR36-Utp21_1st
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR41
DSE1_N
Beta-prop_ACSF4
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
103393399
NCBI-ProteinID:
XP_008328578
UniProt:
A0A3P8VG00
LinkDB
All DBs
Position
17
Genome browser
AA seq
315 aa
AA seq
DB search
MSVFSQSFSPCGRFLAAGNNYGEIAIFSLSAALSPDATPSNKKPMLTFTAHEGPVFSLVS
TDCHLISAGNGEVCLWNWAELIKKNVSALLRKRPDYKSSLEIPEINSMAVQIRDNSLVIG
AGDNNVHIMDLEHGVFKSVLKGHTDYIHCVCVRERESEILSGGEDGAVRIWDSRTGTVLS
CISVFKYQECARPQLGKWISCLATDSDWMVCGGGPSLSLWHLRSQSPTSVFPLSNSQRSA
TFHQDMILAVGEGPHVSHCLLGGTIRAQIPSVLQSINTLQLNRNSSEHQVLTVGGSSECI
DVFTNLSYRAFSLRF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcttctctcaaagtttctccccttgtgggcgattcctcgccgccggaaacaat
tatggagagatcgccatcttcagtctgtctgcagcgctgagtcctgacgccacaccgtcc
aataagaaaccaatgctgacattcaccgcccatgaaggtccagtcttctccctggtctcc
actgactgtcacctaatcagtgcaggtaacggtgaggtctgcctctggaactgggctgag
ctcattaagaagaacgtcagtgctctattgaggaaaagacccgactacaagtcgagtttg
gagattccagaaatcaactccatggcggtccaaatcagagacaacagcctggtcatcggt
gcaggagacaacaacgtccacatcatggacctggaacatggagtttttaagtctgtcctg
aagggacacacagactacatccactgtgtctgtgtgagggaacgagagtctgagatcctg
tcaggtggggaggatggagctgtcaggatctgggacagcaggacgggtacggtcctcagt
tgcatctctgtcttcaagtatcaggaatgtgccaggcctcaacttgggaagtggatcagc
tgtttggccacagactcagactggatggtctgtgggggcggtccttccctgtctctgtgg
catcttcgctctcagtcgcccacatcagtcttccctctctcaaattctcaacgtagcgcc
acctttcatcaggacatgatccttgcagttggcgaaggccctcacgtgtcccactgtctg
ctggggggtacgatacgagctcagatcccatctgtgctgcagagcatcaacacactgcag
ctgaacagaaacagttcggaacaccaggtgctgacagttgggggcagcagtgagtgtata
gatgtcttcactaacttgtcctacagagctttttcactccgtttttga
DBGET
integrated database retrieval system