Cynoglossus semilaevis (tongue sole): 103393708
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Entry
103393708 CDS
T04866
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103393708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103393708
03009 Ribosome biogenesis [BR:
csem03009
]
103393708
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103393708
Spliceosome [BR:
csem03041
]
Complex A
U1 snRNP components
U1 related factors
103393708
Complex B
103393708
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
Pre-60S particles
Helicases
103393708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103393708
NCBI-ProteinID:
XP_008328998
UniProt:
A0A0N9H7N8
LinkDB
All DBs
Position
17:complement(15425474..15432356)
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AA seq
620 aa
AA seq
DB search
MPGYSDRDRGRDRDRDRGYGGGPPRFGGSRGGGGGGGGKFGNPGERLRKKHWNLDELPKF
EKNFYQQHPDVARRSPQEVEQYRMVRTITFKGRECPNPITQFQEAAFPSYVMEVIDKQNW
TEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA
PTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEA
GKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFL
KDYVQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRKC
DDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVI
NFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQARDLISVLREANQAINPKLLQM
AEDRGGRSRGGRGGDYRDDRRDRYSSGRRDFNSFRDRDNSRGFDNGPNKSYVTNAQNGGY
GSNNTSSNGYNGASYNANGQSSYTNGQAGGFAGQNNFQAQQFAPAKTGTQNGATHPPFPF
PQTQAPPLLVPYSMPPQFTQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccgacagagaccgcggcagggatagagacagagaccgtggttatggt
ggtggtcctccacgctttggaggctcccgtggtggcggaggaggtggcggcggaaagttt
ggcaatcctggtgagcgcttacggaaaaaacactggaacctggacgagctacccaagttt
gaaaagaatttctatcagcagcaccccgatgttgcccgcaggtcaccgcaagaggtcgag
cagtaccggatggtcagaacaattacgttcaaaggaagagagtgccctaatccaatcaca
caattccaagaggctgcatttccttcttatgtgatggaagtcatagacaaacaaaactgg
actgaaccaacacccatccaggctcagggatggcctctggctcttagtggcaaggatatg
gtcggcattgctcagactggctctggcaaaacactttcttatctgcttccagcaattgta
cacatcaaccaccagcctttcctggaacggggagatggtcctatttgtctggtcctagct
ccaactcgtgaactggctcagcaggtccaacaggtggctgcagaatatggtagagcttct
cgcctcaagtccacctgtatctatggtggagcccctaaaggaccacagatccgtgacctg
gaaagaggtgtggagatttgcatagctactccaggtcgtctcattgactttcttgaagca
ggaaagacaaatcttcgtcgttgtacatatcttgtgctggatgaggcagacaggatgttg
gacatgggatttgagccacagatccgcaagattgttgaccagatcagacctgaccgtcag
acactgatgtggagtgccacctggcctaaagaagtcagacagctggcagaagacttcctg
aaggattatgtccagatcaatgttggagcgctgcagctcagtgccaaccacaacatccta
cagatagtggatgtgtgcaatgatggagagaaggaaaacaaattgattcgtctgctcgag
gaaataatgagtgaaaaagagaacaagaccatcatttttgtagagaccaagagaaagtgt
gatgacctcacaaggaggatgagaagggatggttggccagcgatgggaattcatggagat
aaaagccaacaggaaagagactgggttctcaatgagttcaagtatggaaaagctcccatt
ctgattgctacagatgttgcctccaggggtctcgatgttgaagacgtgaaatttgtcatc
aactttgactaccccaacaactctgaggattatatccatcgtattggccgaacagctcgc
agtcaaaagacgggcaccgcctataccttcttcacaccaaacaacatgagacaggcccgc
gacctcatctctgttctgcgtgaggccaaccaggccattaaccctaagctcctccagatg
gctgaagacagaggaggtcgttcaaggggaggccgaggtggtgattacagagacgaccgc
cgggacaggtattcctctggaagacgtgatttcaatagttttagggacagggataatagt
agggggtttgacaatggaccaaacaaatcttacgtcaccaacgcgcagaacggaggctat
gggagtaacaacaccagcagcaacggctataatggagctagctataatgctaatggacag
tccagttacactaacggtcaggcagggggcttcgcaggtcaaaacaacttccaggcccag
cagtttgcccctgctaagactggtacacagaacggtgccactcatcccccgttccccttc
cctcagacacaggctcctcccctgctggtgccgtactccatgcctcctcagttcactcag
taa
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