Cynoglossus semilaevis (tongue sole): 103393920
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Entry
103393920 CDS
T04866
Symbol
kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103393920 (kdm1b)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103393920 (kdm1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
zf-CW
DAO
Pyr_redox_2
HI0933_like
Pyr_redox
Thi4
Pyr_redox_3
FAD_binding_3
FAD_oxidored
FAD_binding_2
GIDA
Lycopene_cycl
AlaDh_PNT_C
NAD_binding_9
MurD-like_N
2-Hacid_dh_C
KARI_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
103393920
NCBI-ProteinID:
XP_008329266
LinkDB
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Position
18:1895169..1902145
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AA seq
843 aa
AA seq
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MLATSLTIKVHEDICNYSGNTSAARKAKRRNSGESPGEGQALRSSGRQPNVRVKRSNNPP
PGQSKRKATDTEEEDEQSEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCG
EHFCNECFDHYYRSHKDGYEMFASWKKLWTSNGKSEPSLKAFMADQQLPFWVQCTKPECR
KWRQLTKEIQLTASLAATYRCGMKFNNIKSEGPDHCSQPEDLRVAEVTDSWWHSMLILPP
LFKDSPAGPFLAAYYPDCVGMSPSGSISHVSQTDLRADHRTVQPQIPGLCPYFQPFYQPN
ECGKALCVRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRNCKEMLTVQKCAENVI
VRGLVRVRCVQEMERVLNFMTRKGLINTGALAVTQPLLPEKFCTKKVIVVGAGASGLAAA
RQLQNFGTQVLVLEARDRIGGRVWDDSSLGVTVGRGAQIVNGCVNNPISLMCEQMGFKMH
KLGERCDLFQEGGQITDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLGEKVQEVKKN
FLQESGIQFSELEEKVLQFHLSNLEFACGSTLDQVSARSWDHNECFAQFSGDHTLLTKGY
CVLLHKLADGLDIRTKCPVQSIDYSGDVVKVTAANGSQWTAQKVLVTVPLTLLQKNLIQF
HPPLPERKQKAIHSLGAGIIEKIALRFPHRFWDKKIQGADYFGHVPPSPDQRGMFSVFYD
MDPQGKQAVLMSVITGDAVYAVGDMEDREVVRECMTVLRELFKEQDVPDPLHYFITHWRK
DMWSQMSYSYVKTGGSGEAYDVLAEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKM
AAV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgttggccaccagcttaacaattaaagttcatgaagacatttgcaattattcggggaac
acctctgccgctcgaaaagccaagagaagaaactctggagaatcaccaggtgaaggccag
gccctacgctcctctggtcgacagcctaacgttcgagtgaagcgcagcaacaaccctcca
cctggacagagcaagagaaaagcaacggacacagaggaggaagacgaacagtcggagaaa
aagtacaggaagtgtgagaaagccggatgctccgccacataccctgtgtgttttgcgagc
gcgtctgaaaggtgtgctaaaaatggctacacgtctcgatggtatcatctctcctgtggt
gaacacttctgcaatgaatgcttcgaccactactacagaagtcacaaggacggctacgag
atgtttgcatcctggaagaaattgtggacaagcaatggtaaaagtgagcccagcctcaaa
gcgttcatggcggatcagcagctgcccttctgggttcaatgcaccaaaccggagtgtagg
aagtggcgtcagctgaccaaggagatccaactcaccgcatctctggcagcaacgtatcgc
tgcggcatgaaattcaacaacattaagagtgaggggccagaccactgctcccaaccagaa
gatctgagagtggctgaagtgactgacagctggtggcattcaatgctgatcctgccgccg
ctcttcaaagacagtccagccggccccttcctcgctgcctactaccctgactgtgtgggg
atgagtccttcaggctccatcagccacgtctcccaaactgatctgagggcagatcacaga
actgtacagccccaaattccaggtttgtgtccgtacttccagcctttctaccagcctaac
gagtgtgggaaagctctgtgtgtccgaccagacatgatggagctggacgagctctacgag
tttccagagttttcccgagatcccaccatgtacttggctctgagaaacctgatcctggct
tcgtggcacaggaactgcaaggagatgctgactgtgcagaagtgtgcggagaacgtcatc
gtccgcggtttggtgcgcgtccgctgcgtccaggagatggagcgtgtgctgaacttcatg
accaggaagggtttgatcaacactggagcgctggccgtcacacagccacttctccctgag
aaattctgcaccaaaaaggtgatcgttgtcggtgcaggagcctcaggtctggctgctgcg
cggcagctgcagaactttggcactcaggtgctggtactagaagcaagagacagaatcgga
ggacgagtttgggacgattcgtctctgggcgtcaccgtaggtcgaggagctcagattgtc
aacggctgcgtgaacaatcccatcagcctcatgtgtgaacagatgggattcaagatgcac
aaactgggggagcgctgtgacctgttccaggagggaggacagatcactgacccggccatc
gacaagcgcatggacttccacttcaacgccatcttggacgtcgtgtcagaatggaggaag
gacaagtcgcagaaccaggatacaccactgggagaaaaagtccaggaagtaaagaaaaac
ttcctgcaggagtctgggatccagttcagtgagctggaggagaaggttcttcagtttcat
ctcagtaacctggagttcgcctgtgggagcactttggaccaggtatcagccagatcctgg
gaccacaacgaatgttttgcccagttctcaggagaccacactttactcaccaaaggctac
tgcgtcttactccacaaactggccgacggcctggacatccggaccaagtgtccggttcag
tccatcgactactcaggtgacgtggtcaaagtgaccgccgctaatggctctcagtggacg
gcgcagaaggttctggttacggtgccacttactttactccagaagaacttgattcagttc
catcctccacttcctgagaggaaacagaaagcgatccacagtctgggagctgggatcata
gagaagatcgctcttcggttcccacacagattctgggacaaaaaaatccaaggggccgac
tactttggtcacgtcccaccgagtcctgaccagagagggatgttcagtgtcttctacgac
atggatccacaggggaagcaggccgtcctcatgtccgtcatcactggtgatgcagtttac
gctgtcggagacatggaggacagggaggtggtgcgcgagtgtatgacggttctgcgggaa
cttttcaaggagcaggacgtcccagatccgttacattactttatcactcattggcgcaaa
gacatgtggtcgcagatgtcatacagctacgtgaagacagggggcagtggagaggcttac
gacgtcctagctgaagacattcagggcaaagtcttttttgctggagaggccaccaacaga
cacttccctcagactgtgacaggagcctacctcagcggcgtcagagaggccagcaagatg
gctgccgtgtaa
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