Cynoglossus semilaevis (tongue sole): 103394143
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Entry
103394143 CDS
T04866
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103394143 (vps50)
Membrane trafficking [BR:
csem04131
]
Protein recycling
Others
EARP complex
103394143 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
103394143
NCBI-ProteinID:
XP_008329536
UniProt:
A0A3P8VZQ3
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All DBs
Position
18:5201418..5264050
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AA seq
994 aa
AA seq
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MQKIKSLMTRQGLKSPQESMTDLSPVENLRIPSKEELRELREHSSDPLAEQEIINSIEEI
YFSNDSFDMVQHELEKLPPELNLQELEDYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTALQSNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLCEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVLHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYYRTMQWHEEQDKQEKTSTPDD
TAAAESDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSRSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSMSPSRQVASPYAPDQKELSLFQQYLQEGNPFEVHIEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDFVDEQTGDAPLKSSVSRETIRSKKKSD
YNLNKINAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLFAVYTFFGR
NDMPVPSPSLSTQVGREVGTARAVGPVFLYESSGLGLISSRLRTTLNRIQEGLIDMETLG
ENSGVHGPVEDRKEKVPSPHLSQLVVLTNSGNLYGLAQRVVATESLVFLAEQFESLQSHL
DTMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMS
QHNVYVDVLLKEFEQFNERLSDVSRYVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCS
NEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMK
QLANLVNVCLGSHINKRARQKLLAAIDDIDRPKR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctcatgactcggcagggcctgaagagtcctcaggagagcatg
acagaccttagtcctgtggagaacctgaggatccccagcaaggaggagttgcgggagctg
agggagcattccagtgaccccctggcagagcaggagatcatcaacagcattgaggagatc
tacttctctaacgactcctttgacatggtgcagcatgaactggagaagctcccacctgag
ctgaacctgcaggagctggaggattacagagacaagctaaagagacaacaggcagctgtt
tctaaaaaggtggcagatctcatcctggagaaacaaccgtcttatgtcaaggaactggag
agagtgacagcgttgcagtccaacctgcagctggcagcggtcatttgcactaacgcgcgg
agacagctgagtgtagccaaggaaggattcactgaggccagtctgggtttactggccaat
cagaggaggcgacacctgctgacgggcctgttgaaatctctgagaaccataaagacactg
caaagaacagacgtgaggctctgtgaaatgctcgaggaggaagattatccaggtgcgatc
cagctctgcctggaatgtcagaaggctgccagcaccttcaaacactacagctgcatcagt
gaattgaattccaaactgcaggacactctggagcaaattgaggagcagctcgacgtagcc
ttgtccaagacctgtaagcactttgatgttttgcactacaccaaggtccagctggcctac
acactcctgggcaagacacagactgcaatggatcaactgcacatgcacttcacccaggcc
atacacaacactgttttccaagtggtgctgggatatgtggagctgtgtgcggggaacgct
gacacaaagttccagaagatgcaatacaaagacttgtgcacgcatattaccctggacagc
tacatcccctgtctgacagatctgtgcaaggcattgtgggaagtgatgctgagctactac
cgcaccatgcagtggcatgaagagcaggacaagcaggagaaaacatctactccagacgac
acagctgcagcagagtctgatgagttggtcgtggaccgcagctatgtcaagaagaaactg
gagcacggcttgacgcggatctggcaggatgtccagttgaaagttaaagcctacattctg
gggacggacatgtccaacttcaaatacgatgatttcatagttgtactggatgtcatcagc
aggttgatgcaggtgggggaggagttctgcggcagcaggtccgaggtcctgcaggagtcc
atcaaacggcagagtgtcaactacttcaagaactatcacagggcacgacttgaagaactg
aggatgttcctggaaaatgagacatgggaactctgtcctgtcaagtctaattttaacatc
gcccagctccacgagtttaagttcatgggccagtgtcgctctccgtccatgtctccaagc
agacaggtggcttcgccctacgcccccgaccagaaggaactgtccctgttccagcagtac
ctgcaggagggaaacccatttgaggtgcacatcgagcacaaagaggaggagacggaggac
gtgctggcgtccaacgggtatgagtcagacgagctggagaagagcgtatatcaggattat
gacagcgacagtgatgtccccgaggagctgaagcaggactttgtggatgagcagacgggc
gacgcccctcttaagagcagtgtgtcccgggagaccataagaagcaagaaaaagtcggac
tacaatctcaacaaaatcaacgcgcccatcctcaccaacaccaccctcaacgtcatccgg
ctggtcgggaagtacatgcagatgatgagcatcttgaagccgatcgcctttgacgtcatc
cactgtgtgtcccagctcttcgactactacctgttcgctgtgtacaccttctttggccgg
aacgacatgcctgtccccagcccgtctttgtcaactcaggttggcagagaggtgggcact
gcccgggcggtgggccctgtcttcttgtatgagtcatcaggtctgggcctaatcagcagc
agactgagaaccacactgaaccggatccaggagggtctgattgacatggagacacttgga
gaaaattccggagtacatggaccagtggaggacaggaaggagaaggtgcccagtccccat
ctgagccagctggtcgtcctcaccaacagtgggaatctttatggactcgcacaaagggta
gtggcaaccgagtctcttgtgtttttggctgaacagtttgagtcgcttcagtcccatctg
gacacaatgatgcctgcagccaagaagcctttccttcagcagttttattcccagacggtt
tctactgccagtgaactgcggaagcccatatactggatcgtggcagccaaggccatcgac
tacgaacaaatgttgctcatgatggccggggttaaatgggacattcgagagataatgtcg
cagcacaacgtttacgtggacgttcttttaaaggagtttgagcagtttaacgagcggctg
agtgatgtttctaggtatgtgcgcatcccgctgcccgtgtccaacgtcctgtgggagcac
tgcatccgtctggccaacaggactctggtcgagggttacgccaacgtgaagaaatgcagc
aacgagggccgagcactgatgcagctggatttccagcagttcctcatgaagctggaaaag
ctgaccgacctgcgacccatccccgacaaggagtttgtggagacttacatcaaagcctac
tacctgacggagaatgacatggagcagtttatcaagaaccacagggagtactccatgaag
cagctagccaacctggtcaacgtttgcctgggatcgcatataaacaaaagggctcggcag
aagctccttgctgccatcgacgacatcgaccgacccaagagatag
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